RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 MED31Q9Y3C7 131 aa0.14□□□□□ -2.39
SKP1-205ENST00000519054 GVQW2A0A096LPI5 108 aaPredicted RBP0.13□□□□□ -2.39
SKP1-205ENST00000519054 C3orf85A0A1B0GTC6 90 aa0.13□□□□□ -2.39
SKP1-205ENST00000519054 IGLC7A0M8Q6 106 aa0.13□□□□□ -2.39
SKP1-205ENST00000519054 CPSF4LA6NMK7 179 aaKnown RBP0.13□□□□□ -2.39
SKP1-205ENST00000519054 FABP1P07148 127 aa0.13□□□□□ -2.39
SKP1-205ENST00000519054 SAA1P0DJI8 122 aaPredicted RBP0.13□□□□□ -2.39
SKP1-205ENST00000519054 S100A5P33763 92 aa0.13□□□□□ -2.39
SKP1-205ENST00000519054 QRFPP83859 136 aa0.13□□□□□ -2.39
SKP1-205ENST00000519054 CASC2Q6XLA1 102 aa0.13□□□□□ -2.39
SKP1-205ENST00000519054 LINC00305Q7Z4B0 112 aa0.13□□□□□ -2.39
SKP1-205ENST00000519054 C5orf17Q8NAS9 161 aa0.13□□□□□ -2.39
SKP1-205ENST00000519054 CIB3Q96Q77 187 aaPredicted RBP0.13□□□□□ -2.39
SKP1-205ENST00000519054 NPVFQ9HCQ7 196 aa0.13□□□□□ -2.39
SKP1-205ENST00000519054 LAMTOR2Q9Y2Q5 125 aa0.13□□□□□ -2.39
SKP1-205ENST00000519054 A0A087WWC5 75 aa0.12□□□□□ -2.39
SKP1-205ENST00000519054 TRAV13-1A0A0B4J241 112 aa0.12□□□□□ -2.39
SKP1-205ENST00000519054 GNG7O60262 68 aa0.12□□□□□ -2.39
SKP1-205ENST00000519054 CYB5AP00167 134 aa0.12□□□□□ -2.39
SKP1-205ENST00000519054 SLC25A4P12235 298 aa0.12□□□□□ -2.39
SKP1-205ENST00000519054 NDUFA6P56556 154 aa0.12□□□□□ -2.39
SKP1-205ENST00000519054 SPINK7P58062 85 aa0.12□□□□□ -2.39
SKP1-205ENST00000519054 PRLHP81277 87 aa0.12□□□□□ -2.39
SKP1-205ENST00000519054 KLKP1Q107X0 134 aa0.12□□□□□ -2.39
SKP1-205ENST00000519054 RHOHQ15669 191 aa0.12□□□□□ -2.39
SKP1-205ENST00000519054 CROCCP2Q86T23 111 aa0.12□□□□□ -2.39
SKP1-205ENST00000519054 OR5AK2Q8NH90 309 aa0.12□□□□□ -2.39
SKP1-205ENST00000519054 LINC00208Q96KT6 92 aa0.12□□□□□ -2.39
SKP1-205ENST00000519054 CCDC32Q9BV29 185 aa0.12□□□□□ -2.39
SKP1-205ENST00000519054 H3BMG7 143 aa0.11□□□□□ -2.39
SKP1-205ENST00000519054 YPEL1O60688 119 aa0.11□□□□□ -2.39
SKP1-205ENST00000519054 LINC00694P0DN24 101 aa0.11□□□□□ -2.39
SKP1-205ENST00000519054 TPT1P13693 172 aaKnown RBP0.11□□□□□ -2.39
SKP1-205ENST00000519054 WT1-ASQ06250 92 aa0.11□□□□□ -2.39
SKP1-205ENST00000519054 PIGYQ3MUY2 71 aa0.11□□□□□ -2.39
SKP1-205ENST00000519054 XAF1Q6GPH4 301 aa0.11□□□□□ -2.39
SKP1-205ENST00000519054 TMEM229BQ8NBD8 167 aa0.11□□□□□ -2.39
SKP1-205ENST00000519054 MRPL36Q9P0J6 103 aaKnown RBP0.11□□□□□ -2.39
SKP1-205ENST00000519054 C5orf58C9J3I9 102 aa0.1□□□□□ -2.39
SKP1-205ENST00000519054 PGRMC1O00264 195 aaKnown RBP0.1□□□□□ -2.39
SKP1-205ENST00000519054 RPL38P63173 70 aaKnown RBP0.1□□□□□ -2.39
SKP1-205ENST00000519054 OR51A4Q8NGJ6 313 aa0.1□□□□□ -2.39
SKP1-205ENST00000519054 SPRR4Q96PI1 79 aa0.1□□□□□ -2.39
SKP1-205ENST00000519054 COMMD3Q9UBI1 195 aa0.1□□□□□ -2.39
SKP1-205ENST00000519054 IER3IP1Q9Y5U9 82 aa0.1□□□□□ -2.39
SKP1-205ENST00000519054 LOC101927531A0A1B0GV80 90 aa0.09□□□□□ -2.4
SKP1-205ENST00000519054 PRORSD1PA6NEY8 169 aa0.09□□□□□ -2.4
SKP1-205ENST00000519054 RBP2P50120 134 aa0.09□□□□□ -2.4
SKP1-205ENST00000519054 TMEM128Q5BJH2 165 aa0.09□□□□□ -2.4
SKP1-205ENST00000519054 MRPL35Q9NZE8 188 aaKnown RBP0.09□□□□□ -2.4
SKP1-205ENST00000519054 A0A1B0GV72 72 aa0.08□□□□□ -2.4
SKP1-205ENST00000519054 MIF4GDA9UHW6 222 aaKnown RBP0.08□□□□□ -2.4
SKP1-205ENST00000519054 CDC42EP2O14613 210 aa0.08□□□□□ -2.4
SKP1-205ENST00000519054 FAM107AO95990 144 aa0.08□□□□□ -2.4
SKP1-205ENST00000519054 IGKCP01834 107 aa0.08□□□□□ -2.4
SKP1-205ENST00000519054 HBDP02042 147 aa0.08□□□□□ -2.4
SKP1-205ENST00000519054 DNAJB13P59910 316 aa0.08□□□□□ -2.4
SKP1-205ENST00000519054 ZNF56Q15929 161 aa0.08□□□□□ -2.4
SKP1-205ENST00000519054 CFAP126Q5VTH2 177 aa0.08□□□□□ -2.4
SKP1-205ENST00000519054 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.08□□□□□ -2.4
SKP1-205ENST00000519054 OR8J3Q8NGG0 315 aa0.08□□□□□ -2.4
SKP1-205ENST00000519054 BRK1Q8WUW1 75 aa0.08□□□□□ -2.4
SKP1-205ENST00000519054 C1orf54Q8WWF1 131 aa0.08□□□□□ -2.4
SKP1-205ENST00000519054 Q96NJ1 140 aa0.08□□□□□ -2.4
SKP1-205ENST00000519054 V9GYS6 101 aa0.08□□□□□ -2.4
SKP1-205ENST00000519054 CRYM-AS1A6NIL9 109 aa0.07□□□□□ -2.4
SKP1-205ENST00000519054 IFITM5A6NNB3 132 aa0.07□□□□□ -2.4
SKP1-205ENST00000519054 BBIP1A8MTZ0 92 aa0.07□□□□□ -2.4
SKP1-205ENST00000519054 EDF1O60869 148 aaKnown RBP0.07□□□□□ -2.4
SKP1-205ENST00000519054 APOC1P02654 83 aa0.07□□□□□ -2.4
SKP1-205ENST00000519054 SLC25A5P05141 298 aaKnown RBP0.07□□□□□ -2.4
SKP1-205ENST00000519054 GTF2A1P52655 376 aaPredicted RBP0.07□□□□□ -2.4
SKP1-205ENST00000519054 FXYD6P3P58550 94 aa0.07□□□□□ -2.4
SKP1-205ENST00000519054 SSBP3-AS1Q7Z2R9 100 aa0.07□□□□□ -2.4
SKP1-205ENST00000519054 CGREF1Q99674 301 aa0.07□□□□□ -2.4
SKP1-205ENST00000519054 CALML5Q9NZT1 146 aa0.07□□□□□ -2.4
SKP1-205ENST00000519054 HIGD1CA8MV81 97 aa0.06□□□□□ -2.4
SKP1-205ENST00000519054 UQCRQO14949 82 aa0.06□□□□□ -2.4
SKP1-205ENST00000519054 TCRAP04437 139 aa0.06□□□□□ -2.4
SKP1-205ENST00000519054 NBEAP1P0C6P0 100 aa0.06□□□□□ -2.4
SKP1-205ENST00000519054 LINC00032P0C843 101 aa0.06□□□□□ -2.4
SKP1-205ENST00000519054 TRAPPC2P0DI81 140 aa0.06□□□□□ -2.4
SKP1-205ENST00000519054 TRAPPC2BP0DI82 140 aa0.06□□□□□ -2.4
SKP1-205ENST00000519054 SNRPGP62308 76 aaKnown RBP0.06□□□□□ -2.4
SKP1-205ENST00000519054 RPS28P62857 69 aaKnown RBP0.06□□□□□ -2.4
SKP1-205ENST00000519054 H1FX-AS1Q4G0G2 97 aa0.06□□□□□ -2.4
SKP1-205ENST00000519054 WFDC13Q8IUB5 93 aa0.06□□□□□ -2.4
SKP1-205ENST00000519054 OR8I2Q8N0Y5 310 aa0.06□□□□□ -2.4
SKP1-205ENST00000519054 OTOSQ8NHW6 89 aa0.06□□□□□ -2.4
SKP1-205ENST00000519054 AP1S3Q96PC3 154 aa0.06□□□□□ -2.4
SKP1-205ENST00000519054 LINC00959A0A1B0GUT2 108 aa0.05□□□□□ -2.4
SKP1-205ENST00000519054 M0R2P5 195 aa0.05□□□□□ -2.4
SKP1-205ENST00000519054 PFDN1O60925 122 aa0.05□□□□□ -2.4
SKP1-205ENST00000519054 SMIM24O75264 130 aa0.05□□□□□ -2.4
SKP1-205ENST00000519054 HMGN3Q15651 99 aa0.05□□□□□ -2.4
SKP1-205ENST00000519054 C9orf153Q5TBE3 101 aa0.05□□□□□ -2.4
SKP1-205ENST00000519054 C6orf201Q7Z4U5 140 aa0.05□□□□□ -2.4
SKP1-205ENST00000519054 NDUFA4L2Q9NRX3 87 aa0.05□□□□□ -2.4
SKP1-205ENST00000519054 MCRIP1C9JLW8 97 aa0.04□□□□□ -2.4
SKP1-205ENST00000519054 IL7P13232 177 aa0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms