RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 PCOTHQ58A44 107 aa8.81□□□□□ -1
TCOF1-213ENST00000514442 CYP4F30PQ9H0H9 118 aa8.81□□□□□ -1
TCOF1-213ENST00000514442 HELZ2Q9BYK8 2649 aaKnown RBP8.81□□□□□ -1
TCOF1-213ENST00000514442 C19orf73Q9NVV2 129 aa8.8□□□□□ -1
TCOF1-213ENST00000514442 KRTAP1-1Q07627 177 aa8.8□□□□□ -1
TCOF1-213ENST00000514442 IGHV6-1A0A0B4J1U7 121 aa8.79□□□□□ -1
TCOF1-213ENST00000514442 H3BPC8 53 aa8.79□□□□□ -1
TCOF1-213ENST00000514442 AKAP13Q12802 2813 aa8.78□□□□□ -1
TCOF1-213ENST00000514442 Q1T7F1 81 aa8.78□□□□□ -1
TCOF1-213ENST00000514442 Q8NBF4 154 aa8.77□□□□□ -1.01
TCOF1-213ENST00000514442 K7EIL1 84 aa8.76□□□□□ -1.01
TCOF1-213ENST00000514442 PHF5AQ7RTV0 110 aaKnown RBP8.76□□□□□ -1.01
TCOF1-213ENST00000514442 VPS13AQ96RL7 3174 aa8.76□□□□□ -1.01
TCOF1-213ENST00000514442 FAM229BQ4G0N7 80 aa8.75□□□□□ -1.01
TCOF1-213ENST00000514442 ATP11AUNQ6ZP68 121 aa8.75□□□□□ -1.01
TCOF1-213ENST00000514442 NBDYA0A0U1RRE5 68 aa8.75□□□□□ -1.01
TCOF1-213ENST00000514442 RETNLBQ9BQ08 111 aa8.75□□□□□ -1.01
TCOF1-213ENST00000514442 CHTF8P0CG12 524 aa8.73□□□□□ -1.01
TCOF1-213ENST00000514442 SPAG11AQ6PDA7 123 aa8.72□□□□□ -1.01
TCOF1-213ENST00000514442 Q6ZRP5 223 aa8.72□□□□□ -1.01
TCOF1-213ENST00000514442 OCR1Q9BZK8 76 aa8.72□□□□□ -1.01
TCOF1-213ENST00000514442 ATRQ13535 2644 aa8.72□□□□□ -1.01
TCOF1-213ENST00000514442 DSPP15924 2871 aaKnown RBP8.72□□□□□ -1.01
TCOF1-213ENST00000514442 K7EQZ3 153 aa8.71□□□□□ -1.01
TCOF1-213ENST00000514442 GVQW2A0A096LPI5 108 aaPredicted RBP8.71□□□□□ -1.02
TCOF1-213ENST00000514442 FAM168BA1KXE4 195 aa8.7□□□□□ -1.02
TCOF1-213ENST00000514442 DNAH10OSP0CZ25 163 aa8.7□□□□□ -1.02
TCOF1-213ENST00000514442 C7orf65Q6ZTY9 151 aa8.7□□□□□ -1.02
TCOF1-213ENST00000514442 RTL8CO15255 209 aa8.7□□□□□ -1.02
TCOF1-213ENST00000514442 EPM2AB3EWF7 344 aa8.69□□□□□ -1.02
TCOF1-213ENST00000514442 ST20-AS1Q8NBB2 130 aa8.69□□□□□ -1.02
TCOF1-213ENST00000514442 SERTAD4-AS1Q5TG53 156 aa8.68□□□□□ -1.02
TCOF1-213ENST00000514442 VPREB1P12018 145 aa8.67□□□□□ -1.02
TCOF1-213ENST00000514442 COA5Q86WW8 74 aa8.67□□□□□ -1.02
TCOF1-213ENST00000514442 LINC00528Q8N1L1 170 aa8.67□□□□□ -1.02
TCOF1-213ENST00000514442 Q6ZRX8 168 aa8.67□□□□□ -1.02
TCOF1-213ENST00000514442 MOBPQ13875 183 aa8.67□□□□□ -1.02
TCOF1-213ENST00000514442 DNAH14Q0VDD8 3507 aa8.67□□□□□ -1.02
TCOF1-213ENST00000514442 CELSR3Q9NYQ7 3312 aa8.67□□□□□ -1.02
TCOF1-213ENST00000514442 MAST4O15021 2626 aa8.67□□□□□ -1.02
TCOF1-213ENST00000514442 LOC101927531A0A1B0GV80 90 aa8.66□□□□□ -1.02
TCOF1-213ENST00000514442 C16orf90A8MZG2 172 aa8.66□□□□□ -1.02
TCOF1-213ENST00000514442 LAMA1P25391 3075 aa8.66□□□□□ -1.02
TCOF1-213ENST00000514442 VCANP13611 3396 aa8.65□□□□□ -1.02
TCOF1-213ENST00000514442 LCA10Q71F78 164 aa8.65□□□□□ -1.03
TCOF1-213ENST00000514442 LINC00612Q8N6U2 182 aa8.65□□□□□ -1.03
TCOF1-213ENST00000514442 RBM12B-AS1Q9P1G2 102 aa8.64□□□□□ -1.03
TCOF1-213ENST00000514442 LINC00476Q8WZB0 136 aa8.64□□□□□ -1.03
TCOF1-213ENST00000514442 TP53AIP1Q9HCN2 124 aa8.63□□□□□ -1.03
TCOF1-213ENST00000514442 PRR34Q9NV39 138 aa8.62□□□□□ -1.03
TCOF1-213ENST00000514442 C15orf56Q8N910 161 aa8.62□□□□□ -1.03
TCOF1-213ENST00000514442 C8orf87E5RJ46 101 aa8.61□□□□□ -1.03
TCOF1-213ENST00000514442 MAP1AP78559 2803 aaPredicted RBP8.61□□□□□ -1.03
TCOF1-213ENST00000514442 WWC2-AS2Q96NR7 200 aa8.6□□□□□ -1.03
TCOF1-213ENST00000514442 RPL37AP61513 92 aaKnown RBP8.6□□□□□ -1.03
TCOF1-213ENST00000514442 SPACA4Q8TDM5 124 aa8.6□□□□□ -1.03
TCOF1-213ENST00000514442 SPANXA2-OT1Q8N9U9 137 aa8.59□□□□□ -1.03
TCOF1-213ENST00000514442 CDC42SE1Q9NRR8 79 aa8.59□□□□□ -1.03
TCOF1-213ENST00000514442 Q8N377 158 aa8.58□□□□□ -1.04
TCOF1-213ENST00000514442 A0A1B0GU69 56 aa8.57□□□□□ -1.04
TCOF1-213ENST00000514442 KCNQ1DNQ9H478 68 aa8.57□□□□□ -1.04
TCOF1-213ENST00000514442 CR1P17927 2039 aa8.56□□□□□ -1.04
TCOF1-213ENST00000514442 CASC10Q5T4H9 136 aa8.55□□□□□ -1.04
TCOF1-213ENST00000514442 TEP1Q99973 2627 aaKnown RBP8.55□□□□□ -1.04
TCOF1-213ENST00000514442 IGLV1-50A0A075B6I6 118 aa8.54□□□□□ -1.04
TCOF1-213ENST00000514442 ACYP2P14621 99 aa8.54□□□□□ -1.04
TCOF1-213ENST00000514442 A8MWP4 228 aa8.53□□□□□ -1.04
TCOF1-213ENST00000514442 A0A1W2PNM2 257 aa8.53□□□□□ -1.04
TCOF1-213ENST00000514442 FRYQ5TBA9 3013 aa8.53□□□□□ -1.04
TCOF1-213ENST00000514442 IGSF10Q6WRI0 2623 aa8.53□□□□□ -1.04
TCOF1-213ENST00000514442 SPINK1P00995 79 aa8.52□□□□□ -1.05
TCOF1-213ENST00000514442 Q75L30 129 aa8.5□□□□□ -1.05
TCOF1-213ENST00000514442 COL6A3P12111 3177 aa8.5□□□□□ -1.05
TCOF1-213ENST00000514442 IGLV5-48A0A075B6I7 105 aa8.5□□□□□ -1.05
TCOF1-213ENST00000514442 IGKV2D-30A0A075B6S6 120 aa8.5□□□□□ -1.05
TCOF1-213ENST00000514442 IGKV2-30P06310 120 aa8.5□□□□□ -1.05
TCOF1-213ENST00000514442 Q5VV11 94 aa8.49□□□□□ -1.05
TCOF1-213ENST00000514442 CHD6Q8TD26 2715 aa8.48□□□□□ -1.05
TCOF1-213ENST00000514442 IGFL1Q6UW32 110 aa8.48□□□□□ -1.05
TCOF1-213ENST00000514442 A0A0G2JQZ4 141 aa8.47□□□□□ -1.05
TCOF1-213ENST00000514442 A0A1W2PNN7 141 aa8.47□□□□□ -1.05
TCOF1-213ENST00000514442 Q8N9P0 234 aaPredicted RBP8.47□□□□□ -1.05
TCOF1-213ENST00000514442 TYMSOSQ8TAI1 123 aa8.47□□□□□ -1.05
TCOF1-213ENST00000514442 APLNQ9ULZ1 77 aa8.46□□□□□ -1.06
TCOF1-213ENST00000514442 A0A087WTM6 91 aa8.46□□□□□ -1.06
TCOF1-213ENST00000514442 DSCR10P59022 87 aa8.46□□□□□ -1.06
TCOF1-213ENST00000514442 TEX15Q9BXT5 2789 aa8.45□□□□□ -1.06
TCOF1-213ENST00000514442 SPTBN5Q9NRC6 3674 aaKnown RBP8.45□□□□□ -1.06
TCOF1-213ENST00000514442 Q8NDZ9 215 aa8.45□□□□□ -1.06
TCOF1-213ENST00000514442 FAM229AH3BQW9 127 aa8.43□□□□□ -1.06
TCOF1-213ENST00000514442 BOD1L1Q8NFC6 3051 aa8.42□□□□□ -1.06
TCOF1-213ENST00000514442 C9orf163Q8N9P6 203 aa8.42□□□□□ -1.06
TCOF1-213ENST00000514442 ANAPC11Q9NYG5 84 aa8.4□□□□□ -1.06
TCOF1-213ENST00000514442 TLX1NBP0CAT3 122 aa8.4□□□□□ -1.06
TCOF1-213ENST00000514442 UNC79Q9P2D8 2635 aa8.4□□□□□ -1.07
TCOF1-213ENST00000514442 PLA2G1BP04054 148 aaKnown RBP8.4□□□□□ -1.07
TCOF1-213ENST00000514442 SPRR4Q96PI1 79 aa8.4□□□□□ -1.07
TCOF1-213ENST00000514442 EYSQ5T1H1 3165 aa8.39□□□□□ -1.07
TCOF1-213ENST00000514442 FRYLO94915 3013 aa8.39□□□□□ -1.07
TCOF1-213ENST00000514442 LINC00313P59037 77 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 247.5 ms