RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 Q6ZRX8 168 aa6.7□□□□□ -1.34
DDX41-215ENST00000512431 MIR7-3HGQ8N6C7 128 aa6.7□□□□□ -1.34
DDX41-215ENST00000512431 LINC00587B1AMM8 73 aa6.69□□□□□ -1.34
DDX41-215ENST00000512431 CFC1P0CG37 223 aa6.69□□□□□ -1.34
DDX41-215ENST00000512431 C11orf86A6NJI1 115 aa6.68□□□□□ -1.34
DDX41-215ENST00000512431 HBDP02042 147 aa6.68□□□□□ -1.34
DDX41-215ENST00000512431 DDTP30046 118 aa6.68□□□□□ -1.34
DDX41-215ENST00000512431 BAGE3Q86Y29 109 aa6.68□□□□□ -1.34
DDX41-215ENST00000512431 CHCHD1Q96BP2 118 aaKnown RBP6.68□□□□□ -1.34
DDX41-215ENST00000512431 FLGP20930 4061 aaPredicted RBP6.67□□□□□ -1.34
DDX41-215ENST00000512431 RPL37P61927 97 aaKnown RBP6.67□□□□□ -1.34
DDX41-215ENST00000512431 MAP1LC3CQ9BXW4 147 aa6.67□□□□□ -1.34
DDX41-215ENST00000512431 SSPOA2VEC9 5147 aa6.66□□□□□ -1.34
DDX41-215ENST00000512431 HERV-K104P63124 156 aa6.66□□□□□ -1.34
DDX41-215ENST00000512431 SLC25A34Q6PIV7 304 aa6.66□□□□□ -1.34
DDX41-215ENST00000512431 Q6Q795 121 aa6.66□□□□□ -1.34
DDX41-215ENST00000512431 USH2AO75445 5202 aa6.66□□□□□ -1.34
DDX41-215ENST00000512431 HSBP1O75506 76 aa6.65□□□□□ -1.34
DDX41-215ENST00000512431 TRBV10-2A0A0K0K1G8 114 aa6.64□□□□□ -1.35
DDX41-215ENST00000512431 C5orf52A6NGY3 159 aa6.64□□□□□ -1.35
DDX41-215ENST00000512431 S100A7L2Q5SY68 101 aa6.64□□□□□ -1.35
DDX41-215ENST00000512431 COA6Q5JTJ3 125 aaKnown RBP6.63□□□□□ -1.35
DDX41-215ENST00000512431 ST20-AS1Q8NBB2 130 aa6.63□□□□□ -1.35
DDX41-215ENST00000512431 CHTOPQ9Y3Y2 248 aaKnown RBP6.63□□□□□ -1.35
DDX41-215ENST00000512431 TMEM223A0PJW6 202 aa6.62□□□□□ -1.35
DDX41-215ENST00000512431 HINT1P49773 126 aaPredicted RBP6.61□□□□□ -1.35
DDX41-215ENST00000512431 LAMTOR3Q9UHA4 124 aa6.61□□□□□ -1.35
DDX41-215ENST00000512431 TRAV23DV6A0A075B6W5 121 aa6.6□□□□□ -1.35
DDX41-215ENST00000512431 MYMXA0A1B0GTQ4 84 aa6.6□□□□□ -1.35
DDX41-215ENST00000512431 FABP4P15090 132 aa6.6□□□□□ -1.35
DDX41-215ENST00000512431 CD164Q04900 197 aa6.6□□□□□ -1.35
DDX41-215ENST00000512431 IFI27L1Q96BM0 104 aa6.6□□□□□ -1.35
DDX41-215ENST00000512431 MIEN1Q9BRT3 115 aa6.6□□□□□ -1.35
DDX41-215ENST00000512431 SPANXB1Q9NS25 103 aaPredicted RBP6.6□□□□□ -1.35
DDX41-215ENST00000512431 LEPROTL1O95214 131 aa6.59□□□□□ -1.35
DDX41-215ENST00000512431 FCGBPQ9Y6R7 5405 aaPredicted RBP6.59□□□□□ -1.36
DDX41-215ENST00000512431 LOC107984156A0A0G2JMH3 177 aa6.58□□□□□ -1.36
DDX41-215ENST00000512431 H7C2G1 150 aa6.58□□□□□ -1.36
DDX41-215ENST00000512431 ZNF73O43830 326 aaPredicted RBP6.58□□□□□ -1.36
DDX41-215ENST00000512431 SPRR1BP22528 89 aa6.58□□□□□ -1.36
DDX41-215ENST00000512431 ARL17AQ8IVW1 177 aa6.58□□□□□ -1.36
DDX41-215ENST00000512431 TRAV12-1A0A0B4J245 112 aa6.57□□□□□ -1.36
DDX41-215ENST00000512431 PRO1933Q9H354 126 aa6.57□□□□□ -1.36
DDX41-215ENST00000512431 CBY1Q9Y3M2 126 aa6.57□□□□□ -1.36
DDX41-215ENST00000512431 H0Y8G0 127 aa6.56□□□□□ -1.36
DDX41-215ENST00000512431 C1orf195Q5TG92 126 aa6.56□□□□□ -1.36
DDX41-215ENST00000512431 HIST3H2BBQ8N257 126 aa6.56□□□□□ -1.36
DDX41-215ENST00000512431 KRTAP9-8Q9BYQ0 159 aa6.56□□□□□ -1.36
DDX41-215ENST00000512431 NDUFC2O95298 119 aa6.55□□□□□ -1.36
DDX41-215ENST00000512431 Q5XG85 94 aa6.55□□□□□ -1.36
DDX41-215ENST00000512431 KRTAP19-1Q8IUB9 90 aa6.55□□□□□ -1.36
DDX41-215ENST00000512431 PMCHL2Q9BQD1 86 aa6.55□□□□□ -1.36
DDX41-215ENST00000512431 HSPB8Q9UJY1 196 aa6.55□□□□□ -1.36
DDX41-215ENST00000512431 SNRPEP62304 92 aaKnown RBP6.54□□□□□ -1.36
DDX41-215ENST00000512431 HIST1H2BLQ99880 126 aa6.54□□□□□ -1.36
DDX41-215ENST00000512431 DHRS4-AS1Q9P1J3 65 aa6.54□□□□□ -1.36
DDX41-215ENST00000512431 MACF1Q9UPN3 7388 aaKnown RBP6.54□□□□□ -1.36
DDX41-215ENST00000512431 SYS1-DBNDD2H3BUS1 97 aa6.53□□□□□ -1.36
DDX41-215ENST00000512431 C3orf79P0CE67 100 aa6.53□□□□□ -1.36
DDX41-215ENST00000512431 TAL2Q16559 108 aa6.53□□□□□ -1.36
DDX41-215ENST00000512431 ATP11AUNQ6ZP68 121 aa6.53□□□□□ -1.36
DDX41-215ENST00000512431 AKR1D1P51857 326 aa6.52□□□□□ -1.37
DDX41-215ENST00000512431 Q1RN00 199 aa6.52□□□□□ -1.37
DDX41-215ENST00000512431 C20orf202A1L168 122 aa6.51□□□□□ -1.37
DDX41-215ENST00000512431 SMIM29Q86T20 159 aa6.51□□□□□ -1.37
DDX41-215ENST00000512431 SYNE2Q8WXH0 6885 aaKnown RBP6.5□□□□□ -1.37
DDX41-215ENST00000512431 KRTDAPP60985 99 aa6.5□□□□□ -1.37
DDX41-215ENST00000512431 LINC01545Q5VT33 79 aa6.5□□□□□ -1.37
DDX41-215ENST00000512431 DEFB105AQ8NG35 78 aa6.5□□□□□ -1.37
DDX41-215ENST00000512431 LINC00846Q9NV44 126 aa6.5□□□□□ -1.37
DDX41-215ENST00000512431 TMA7Q9Y2S6 64 aaKnown RBP6.5□□□□□ -1.37
DDX41-215ENST00000512431 DPM2O94777 84 aa6.49□□□□□ -1.37
DDX41-215ENST00000512431 S100A6P06703 90 aa6.49□□□□□ -1.37
DDX41-215ENST00000512431 PET117Q6UWS5 81 aa6.49□□□□□ -1.37
DDX41-215ENST00000512431 TCL1BO95988 128 aa6.48□□□□□ -1.37
DDX41-215ENST00000512431 IGKCP01834 107 aa6.48□□□□□ -1.37
DDX41-215ENST00000512431 TSPEAR-AS2P59090 65 aa6.48□□□□□ -1.37
DDX41-215ENST00000512431 TEX49A0A1B0GTD5 131 aa6.47□□□□□ -1.37
DDX41-215ENST00000512431 LEPROTO15243 131 aa6.47□□□□□ -1.37
DDX41-215ENST00000512431 PLNP26678 52 aa6.47□□□□□ -1.37
DDX41-215ENST00000512431 OR13C6PQ8NH95 151 aa6.47□□□□□ -1.37
DDX41-215ENST00000512431 S100A2P29034 98 aa6.46□□□□□ -1.38
DDX41-215ENST00000512431 NPC2P61916 151 aa6.46□□□□□ -1.38
DDX41-215ENST00000512431 ATOH7Q8N100 152 aa6.46□□□□□ -1.38
DDX41-215ENST00000512431 TRBV20-1A0A075B6N2 111 aa6.45□□□□□ -1.38
DDX41-215ENST00000512431 J3QQQ9 107 aa6.45□□□□□ -1.38
DDX41-215ENST00000512431 NMUP48645 174 aa6.45□□□□□ -1.38
DDX41-215ENST00000512431 LCE2BO14633 110 aa6.44□□□□□ -1.38
DDX41-215ENST00000512431 LGALS3P17931 250 aaKnown RBP6.44□□□□□ -1.38
DDX41-215ENST00000512431 COX7BP24311 80 aa6.44□□□□□ -1.38
DDX41-215ENST00000512431 PCP2Q8IVA1 136 aa6.44□□□□□ -1.38
DDX41-215ENST00000512431 HERVK_113P61574 105 aa6.43□□□□□ -1.38
DDX41-215ENST00000512431 ANKRD39Q53RE8 183 aa6.43□□□□□ -1.38
DDX41-215ENST00000512431 Q75L30 129 aa6.43□□□□□ -1.38
DDX41-215ENST00000512431 MT2AP02795 61 aa6.42□□□□□ -1.38
DDX41-215ENST00000512431 ELOF1P60002 83 aaKnown RBP6.42□□□□□ -1.38
DDX41-215ENST00000512431 SOSTDC1Q6X4U4 206 aa6.42□□□□□ -1.38
DDX41-215ENST00000512431 A0A0G2JQZ4 141 aa6.41□□□□□ -1.38
DDX41-215ENST00000512431 E9PLD3 99 aa6.41□□□□□ -1.38
DDX41-215ENST00000512431 TTTY13Q9BZ97 58 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms