RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 NCR3O14931 201 aa5.87□□□□□ -1.47
SNF8-211ENST00000512243 SRSF9Q13242 221 aaKnown RBP eCLIP5.87□□□□□ -1.47
SNF8-211ENST00000512243 Q8NDZ9 215 aa5.87□□□□□ -1.47
SNF8-211ENST00000512243 PKHD1L1Q86WI1 4243 aa5.86□□□□□ -1.47
SNF8-211ENST00000512243 GAGE10A6NGK3 116 aa5.86□□□□□ -1.47
SNF8-211ENST00000512243 NDUFC2O95298 119 aa5.86□□□□□ -1.47
SNF8-211ENST00000512243 RPL37AP61513 92 aaKnown RBP5.86□□□□□ -1.47
SNF8-211ENST00000512243 HIGD1BQ9P298 99 aa5.86□□□□□ -1.47
SNF8-211ENST00000512243 M0R378 163 aa5.85□□□□□ -1.47
SNF8-211ENST00000512243 Q5VSD8 79 aa5.85□□□□□ -1.47
SNF8-211ENST00000512243 LINC00167Q96N53 147 aa5.85□□□□□ -1.47
SNF8-211ENST00000512243 HIST1H4GQ99525 98 aa5.85□□□□□ -1.47
SNF8-211ENST00000512243 PPDPFQ9H3Y8 114 aa5.85□□□□□ -1.47
SNF8-211ENST00000512243 UQCR10Q9UDW1 63 aa5.85□□□□□ -1.47
SNF8-211ENST00000512243 TRBV10-2A0A0K0K1G8 114 aa5.84□□□□□ -1.47
SNF8-211ENST00000512243 C2orf91Q6ZV80 131 aa5.84□□□□□ -1.47
SNF8-211ENST00000512243 MUSTN1Q8IVN3 82 aa5.84□□□□□ -1.47
SNF8-211ENST00000512243 C12orf57Q99622 126 aa5.84□□□□□ -1.47
SNF8-211ENST00000512243 IGKV2-28A0A075B6P5 120 aa5.83□□□□□ -1.48
SNF8-211ENST00000512243 RPL37AP8A6NKH3 93 aa5.83□□□□□ -1.48
SNF8-211ENST00000512243 IGKV2D-28P01615 120 aa5.83□□□□□ -1.48
SNF8-211ENST00000512243 PRR3P79522 188 aaKnown RBP5.83□□□□□ -1.48
SNF8-211ENST00000512243 PSORS1C2Q9UIG4 136 aa5.83□□□□□ -1.48
SNF8-211ENST00000512243 HERC2O95714 4834 aa5.83□□□□□ -1.48
SNF8-211ENST00000512243 DDTP30046 118 aa5.82□□□□□ -1.48
SNF8-211ENST00000512243 C1orf137Q5JT78 98 aa5.82□□□□□ -1.48
SNF8-211ENST00000512243 S100A7L2Q5SY68 101 aa5.82□□□□□ -1.48
SNF8-211ENST00000512243 LINC00518Q8N0U6 118 aa5.82□□□□□ -1.48
SNF8-211ENST00000512243 PRO1933Q9H354 126 aa5.82□□□□□ -1.48
SNF8-211ENST00000512243 SRRM2Q9UQ35 2752 aaKnown RBP5.81□□□□□ -1.48
SNF8-211ENST00000512243 IGLV1-50A0A075B6I6 118 aa5.81□□□□□ -1.48
SNF8-211ENST00000512243 TRBV10-3A0A0K0K1G6 114 aa5.81□□□□□ -1.48
SNF8-211ENST00000512243 HNRNPA3P51991 378 aaKnown RBP5.81□□□□□ -1.48
SNF8-211ENST00000512243 TAL2Q16559 108 aa5.81□□□□□ -1.48
SNF8-211ENST00000512243 KRTAP11-1Q8IUC1 163 aa5.81□□□□□ -1.48
SNF8-211ENST00000512243 OR13C6PQ8NH95 151 aa5.81□□□□□ -1.48
SNF8-211ENST00000512243 TSTD3H0UI37 97 aa5.8□□□□□ -1.48
SNF8-211ENST00000512243 HSD52Q0P140 79 aa5.8□□□□□ -1.48
SNF8-211ENST00000512243 CBY1Q9Y3M2 126 aa5.8□□□□□ -1.48
SNF8-211ENST00000512243 TRAV13-2A0A0B4J235 113 aa5.79□□□□□ -1.48
SNF8-211ENST00000512243 A4D1N5 150 aa5.79□□□□□ -1.48
SNF8-211ENST00000512243 IGLV6-57P01721 117 aa5.79□□□□□ -1.48
SNF8-211ENST00000512243 REG3GQ6UW15 175 aa5.79□□□□□ -1.48
SNF8-211ENST00000512243 CEND1Q8N111 149 aa5.79□□□□□ -1.48
SNF8-211ENST00000512243 TRAV23DV6A0A075B6W5 121 aa5.78□□□□□ -1.48
SNF8-211ENST00000512243 BCE1O60756 84 aa5.78□□□□□ -1.48
SNF8-211ENST00000512243 LINC00337Q8N6G1 96 aa5.78□□□□□ -1.48
SNF8-211ENST00000512243 TMEM126AQ9H061 195 aa5.78□□□□□ -1.48
SNF8-211ENST00000512243 KCNQ1DNQ9H478 68 aa5.78□□□□□ -1.48
SNF8-211ENST00000512243 A6NDN8 102 aa5.77□□□□□ -1.49
SNF8-211ENST00000512243 IGLV7-43P04211 117 aa5.77□□□□□ -1.49
SNF8-211ENST00000512243 UBE2AP49459 152 aa5.77□□□□□ -1.49
SNF8-211ENST00000512243 KRTAP10-6P60371 365 aaPredicted RBP5.77□□□□□ -1.49
SNF8-211ENST00000512243 KRTAP10-4P60372 401 aaPredicted RBP5.77□□□□□ -1.49
SNF8-211ENST00000512243 ETDCA0A1B0GVM5 59 aa5.76□□□□□ -1.49
SNF8-211ENST00000512243 FXYD2P54710 66 aa5.76□□□□□ -1.49
SNF8-211ENST00000512243 KRTAP10-7P60409 375 aaPredicted RBP5.76□□□□□ -1.49
SNF8-211ENST00000512243 FAM19A1Q7Z5A9 133 aa5.76□□□□□ -1.49
SNF8-211ENST00000512243 RPL13AP40429 203 aaKnown RBP5.75□□□□□ -1.49
SNF8-211ENST00000512243 RPL28P46779 137 aaKnown RBP5.75□□□□□ -1.49
SNF8-211ENST00000512243 DIRC1Q969H9 104 aa5.75□□□□□ -1.49
SNF8-211ENST00000512243 RAB37Q96AX2 223 aa5.75□□□□□ -1.49
SNF8-211ENST00000512243 FLG2Q5D862 2391 aaPredicted RBP5.75□□□□□ -1.49
SNF8-211ENST00000512243 A0A0B4J2C4 111 aa5.74□□□□□ -1.49
SNF8-211ENST00000512243 ZNF73O43830 326 aaPredicted RBP5.74□□□□□ -1.49
SNF8-211ENST00000512243 ZNF861PO60384 105 aa5.74□□□□□ -1.49
SNF8-211ENST00000512243 CFC1BP0CG36 223 aa5.74□□□□□ -1.49
SNF8-211ENST00000512243 CFC1P0CG37 223 aa5.74□□□□□ -1.49
SNF8-211ENST00000512243 SPRR1AP35321 89 aa5.74□□□□□ -1.49
SNF8-211ENST00000512243 HINT1P49773 126 aaPredicted RBP5.74□□□□□ -1.49
SNF8-211ENST00000512243 M0R143 59 aa5.73□□□□□ -1.49
SNF8-211ENST00000512243 INAFM2P0DMQ5 153 aa5.73□□□□□ -1.49
SNF8-211ENST00000512243 CTAG1AP78358 180 aa5.73□□□□□ -1.49
SNF8-211ENST00000512243 PRLHP81277 87 aa5.73□□□□□ -1.49
SNF8-211ENST00000512243 SPINK6Q6UWN8 80 aa5.73□□□□□ -1.49
SNF8-211ENST00000512243 NHP2Q9NX24 153 aaKnown RBP5.73□□□□□ -1.49
SNF8-211ENST00000512243 KRTAP4-16G5E9R7 235 aaPredicted RBP5.72□□□□□ -1.49
SNF8-211ENST00000512243 C6orf99Q4VX62 202 aa5.72□□□□□ -1.49
SNF8-211ENST00000512243 KRTAP13-1Q8IUC0 172 aa5.72□□□□□ -1.49
SNF8-211ENST00000512243 H0Y9J4 135 aa5.71□□□□□ -1.5
SNF8-211ENST00000512243 H7C2G1 150 aa5.71□□□□□ -1.5
SNF8-211ENST00000512243 Q1RN00 199 aa5.71□□□□□ -1.5
SNF8-211ENST00000512243 BVES-AS1Q5T3Y7 98 aa5.71□□□□□ -1.5
SNF8-211ENST00000512243 Q6ZRX8 168 aa5.71□□□□□ -1.5
SNF8-211ENST00000512243 SMIM11BQ8TCY0 68 aa5.71□□□□□ -1.5
SNF8-211ENST00000512243 HIGD2AQ9BW72 106 aa5.71□□□□□ -1.5
SNF8-211ENST00000512243 COX7BP24311 80 aa5.7□□□□□ -1.5
SNF8-211ENST00000512243 PRO1854Q9UHT4 67 aa5.7□□□□□ -1.5
SNF8-211ENST00000512243 FAT3Q8TDW7 4589 aa5.7□□□□□ -1.5
SNF8-211ENST00000512243 TRBV7-6A0A0J9YX20 115 aa5.69□□□□□ -1.5
SNF8-211ENST00000512243 A0A1B0GWB2 263 aa5.69□□□□□ -1.5
SNF8-211ENST00000512243 K7ERJ3 54 aa5.69□□□□□ -1.5
SNF8-211ENST00000512243 ELOF1P60002 83 aaKnown RBP5.69□□□□□ -1.5
SNF8-211ENST00000512243 VAMP3Q15836 100 aa5.68□□□□□ -1.5
SNF8-211ENST00000512243 PRR26Q8N8Z3 221 aa5.68□□□□□ -1.5
SNF8-211ENST00000512243 MYCBP2O75592 4640 aa5.68□□□□□ -1.5
SNF8-211ENST00000512243 BATFQ16520 125 aa5.67□□□□□ -1.5
SNF8-211ENST00000512243 SMCR5Q8TEV8 140 aa5.67□□□□□ -1.5
SNF8-211ENST00000512243 Q9BRP9 147 aa5.67□□□□□ -1.5
SNF8-211ENST00000512243 DHRS4-AS1Q9P1J3 65 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms