RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 SCGB1D1O95968 90 aa4.41□□□□□ -1.7
GYPB-206ENST00000506516 UBE2AP49459 152 aa4.41□□□□□ -1.7
GYPB-206ENST00000506516 ATOH7Q8N100 152 aa4.41□□□□□ -1.7
GYPB-206ENST00000506516 DAND5Q8N907 189 aa4.41□□□□□ -1.7
GYPB-206ENST00000506516 TMEM126AQ9H061 195 aa4.41□□□□□ -1.7
GYPB-206ENST00000506516 TRBV10-2A0A0K0K1G8 114 aa4.4□□□□□ -1.71
GYPB-206ENST00000506516 C5orf52A6NGY3 159 aa4.4□□□□□ -1.71
GYPB-206ENST00000506516 NCR3O14931 201 aa4.4□□□□□ -1.71
GYPB-206ENST00000506516 NDUFC2O95298 119 aa4.4□□□□□ -1.71
GYPB-206ENST00000506516 SCGB1D4Q6XE38 83 aa4.4□□□□□ -1.71
GYPB-206ENST00000506516 FAM19A1Q7Z5A9 133 aa4.4□□□□□ -1.71
GYPB-206ENST00000506516 Q8NDZ9 215 aa4.4□□□□□ -1.71
GYPB-206ENST00000506516 FLG2Q5D862 2391 aaPredicted RBP4.4□□□□□ -1.71
GYPB-206ENST00000506516 TMEM238C9JI98 176 aa4.39□□□□□ -1.71
GYPB-206ENST00000506516 MT1HL1P0DM35 61 aa4.39□□□□□ -1.71
GYPB-206ENST00000506516 S100A7L2Q5SY68 101 aa4.39□□□□□ -1.71
GYPB-206ENST00000506516 ADAMTSL4-AS1Q5T5F5 129 aa4.39□□□□□ -1.71
GYPB-206ENST00000506516 COPS9Q8WXC6 57 aa4.39□□□□□ -1.71
GYPB-206ENST00000506516 SPANXB1Q9NS25 103 aaPredicted RBP4.39□□□□□ -1.71
GYPB-206ENST00000506516 DDTP30046 118 aa4.38□□□□□ -1.71
GYPB-206ENST00000506516 KRTAP10-8P60410 259 aa4.38□□□□□ -1.71
GYPB-206ENST00000506516 NPC2P61916 151 aa4.38□□□□□ -1.71
GYPB-206ENST00000506516 LINC00308Q8TCZ7 52 aa4.38□□□□□ -1.71
GYPB-206ENST00000506516 TTTY13Q9BZ97 58 aa4.38□□□□□ -1.71
GYPB-206ENST00000506516 KCNQ1DNQ9H478 68 aa4.38□□□□□ -1.71
GYPB-206ENST00000506516 CBY1Q9Y3M2 126 aa4.38□□□□□ -1.71
GYPB-206ENST00000506516 ETDCA0A1B0GVM5 59 aa4.37□□□□□ -1.71
GYPB-206ENST00000506516 Q6ZVH6 145 aa4.37□□□□□ -1.71
GYPB-206ENST00000506516 KRTAP13-1Q8IUC0 172 aa4.37□□□□□ -1.71
GYPB-206ENST00000506516 LINC00337Q8N6G1 96 aa4.37□□□□□ -1.71
GYPB-206ENST00000506516 LITAFQ99732 161 aa4.37□□□□□ -1.71
GYPB-206ENST00000506516 SPANXDQ9BXN6 97 aa4.37□□□□□ -1.71
GYPB-206ENST00000506516 SPANXCQ9NY87 97 aa4.37□□□□□ -1.71
GYPB-206ENST00000506516 TRBV10-3A0A0K0K1G6 114 aa4.36□□□□□ -1.71
GYPB-206ENST00000506516 IFITM1P13164 125 aa4.36□□□□□ -1.71
GYPB-206ENST00000506516 SPRR1AP35321 89 aa4.36□□□□□ -1.71
GYPB-206ENST00000506516 RPL13AP40429 203 aaKnown RBP4.36□□□□□ -1.71
GYPB-206ENST00000506516 HINT1P49773 126 aaPredicted RBP4.36□□□□□ -1.71
GYPB-206ENST00000506516 PRLHP81277 87 aa4.36□□□□□ -1.71
GYPB-206ENST00000506516 SOSTDC1Q6X4U4 206 aa4.36□□□□□ -1.71
GYPB-206ENST00000506516 PCP2Q8IVA1 136 aa4.36□□□□□ -1.71
GYPB-206ENST00000506516 LINC00518Q8N0U6 118 aa4.36□□□□□ -1.71
GYPB-206ENST00000506516 OR13C6PQ8NH95 151 aa4.36□□□□□ -1.71
GYPB-206ENST00000506516 KRTAP1-4P0C5Y4 121 aa4.35□□□□□ -1.71
GYPB-206ENST00000506516 PRR26Q8N8Z3 221 aa4.35□□□□□ -1.71
GYPB-206ENST00000506516 HIGD2AQ9BW72 106 aa4.35□□□□□ -1.71
GYPB-206ENST00000506516 TNXBP22105 4242 aa4.35□□□□□ -1.71
GYPB-206ENST00000506516 DMBT1Q9UGM3 2413 aaPredicted RBP4.34□□□□□ -1.71
GYPB-206ENST00000506516 TRAV23DV6A0A075B6W5 121 aa4.34□□□□□ -1.71
GYPB-206ENST00000506516 IGLV6-57P01721 117 aa4.34□□□□□ -1.71
GYPB-206ENST00000506516 CRYGAP11844 174 aa4.34□□□□□ -1.71
GYPB-206ENST00000506516 MUSTN1Q8IVN3 82 aa4.34□□□□□ -1.71
GYPB-206ENST00000506516 PPDPFQ9H3Y8 114 aa4.34□□□□□ -1.71
GYPB-206ENST00000506516 KRTAP4-16G5E9R7 235 aaPredicted RBP4.33□□□□□ -1.72
GYPB-206ENST00000506516 JOSD1Q15040 202 aaPredicted RBP4.33□□□□□ -1.72
GYPB-206ENST00000506516 FAM229BQ4G0N7 80 aa4.33□□□□□ -1.72
GYPB-206ENST00000506516 SMCR5Q8TEV8 140 aa4.33□□□□□ -1.72
GYPB-206ENST00000506516 ZNF706Q9Y5V0 76 aaPredicted RBP4.33□□□□□ -1.72
GYPB-206ENST00000506516 ZNF73O43830 326 aaPredicted RBP4.32□□□□□ -1.72
GYPB-206ENST00000506516 COX8AP10176 69 aa4.32□□□□□ -1.72
GYPB-206ENST00000506516 TRAV13-2A0A0B4J235 113 aa4.31□□□□□ -1.72
GYPB-206ENST00000506516 A6NDN8 102 aa4.31□□□□□ -1.72
GYPB-206ENST00000506516 Q6ZRX8 168 aa4.31□□□□□ -1.72
GYPB-206ENST00000506516 TYMSOSQ8TAI1 123 aa4.31□□□□□ -1.72
GYPB-206ENST00000506516 VAMP8Q9BV40 100 aa4.31□□□□□ -1.72
GYPB-206ENST00000506516 ANAPC11Q9NYG5 84 aa4.31□□□□□ -1.72
GYPB-206ENST00000506516 HMCN2Q8NDA2 5059 aa4.3□□□□□ -1.72
GYPB-206ENST00000506516 A0A087X002 238 aa4.3□□□□□ -1.72
GYPB-206ENST00000506516 DLEU1O43261 78 aa4.3□□□□□ -1.72
GYPB-206ENST00000506516 SPATA45Q537H7 98 aa4.3□□□□□ -1.72
GYPB-206ENST00000506516 SPRR4Q96PI1 79 aa4.3□□□□□ -1.72
GYPB-206ENST00000506516 PAM16Q9Y3D7 125 aa4.3□□□□□ -1.72
GYPB-206ENST00000506516 A0A0A0MQY5 61 aa4.29□□□□□ -1.72
GYPB-206ENST00000506516 C6orf99Q4VX62 202 aa4.29□□□□□ -1.72
GYPB-206ENST00000506516 C14orf144Q96I85 54 aa4.29□□□□□ -1.72
GYPB-206ENST00000506516 HIST1H4GQ99525 98 aa4.29□□□□□ -1.72
GYPB-206ENST00000506516 TRBV7-6A0A0J9YX20 115 aa4.28□□□□□ -1.72
GYPB-206ENST00000506516 COX7BP24311 80 aa4.28□□□□□ -1.72
GYPB-206ENST00000506516 GAGE2AQ6NT46 116 aa4.28□□□□□ -1.72
GYPB-206ENST00000506516 SLC25A34Q6PIV7 304 aa4.28□□□□□ -1.72
GYPB-206ENST00000506516 Q9BRP9 147 aa4.28□□□□□ -1.72
GYPB-206ENST00000506516 DHRS4-AS1Q9P1J3 65 aa4.28□□□□□ -1.72
GYPB-206ENST00000506516 A0A1B0GWB2 263 aa4.27□□□□□ -1.73
GYPB-206ENST00000506516 A4D1N5 150 aa4.27□□□□□ -1.73
GYPB-206ENST00000506516 ERC2-IT1O76042 136 aa4.27□□□□□ -1.73
GYPB-206ENST00000506516 VAMP3Q15836 100 aa4.27□□□□□ -1.73
GYPB-206ENST00000506516 KRTAP13-2Q52LG2 175 aa4.27□□□□□ -1.73
GYPB-206ENST00000506516 HIGD1BQ9P298 99 aa4.27□□□□□ -1.73
GYPB-206ENST00000506516 ELOF1P60002 83 aaKnown RBP4.26□□□□□ -1.73
GYPB-206ENST00000506516 LINC00483Q53H64 154 aa4.26□□□□□ -1.73
GYPB-206ENST00000506516 PYY3Q5JQD4 70 aa4.26□□□□□ -1.73
GYPB-206ENST00000506516 SPAG11AQ6PDA7 123 aa4.26□□□□□ -1.73
GYPB-206ENST00000506516 TSPAN13O95857 204 aa4.25□□□□□ -1.73
GYPB-206ENST00000506516 CTAG1AP78358 180 aa4.25□□□□□ -1.73
GYPB-206ENST00000506516 KRTAP5-3Q6L8H2 238 aa4.25□□□□□ -1.73
GYPB-206ENST00000506516 C3orf22Q8N5N4 141 aa4.25□□□□□ -1.73
GYPB-206ENST00000506516 LINC00304Q8N9R0 145 aa4.25□□□□□ -1.73
GYPB-206ENST00000506516 SMIM11BQ8TCY0 68 aa4.25□□□□□ -1.73
GYPB-206ENST00000506516 SLC25A20O43772 301 aa4.24□□□□□ -1.73
GYPB-206ENST00000506516 TAL2Q16559 108 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms