RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 SNHG12Q9BXW3 62 aa1.22□□□□□ -2.21
TRAPPC13-208ENST00000505553 DYNC2H1Q8NCM8 4307 aaKnown RBP1.21□□□□□ -2.22
TRAPPC13-208ENST00000505553 DNAJC13O75165 2243 aa1.21□□□□□ -2.22
TRAPPC13-208ENST00000505553 CADP27708 2225 aa1.21□□□□□ -2.22
TRAPPC13-208ENST00000505553 TENM2Q9NT68 2774 aa1.21□□□□□ -2.22
TRAPPC13-208ENST00000505553 A0A096LNT2 108 aa1.21□□□□□ -2.22
TRAPPC13-208ENST00000505553 TRAV13-2A0A0B4J235 113 aa1.21□□□□□ -2.22
TRAPPC13-208ENST00000505553 OOSP1A8MZH6 123 aa1.21□□□□□ -2.22
TRAPPC13-208ENST00000505553 K7EIL1 84 aa1.21□□□□□ -2.22
TRAPPC13-208ENST00000505553 SPTBP11277 2137 aa1.21□□□□□ -2.22
TRAPPC13-208ENST00000505553 INSL4Q14641 139 aa1.21□□□□□ -2.22
TRAPPC13-208ENST00000505553 TSLPQ969D9 159 aa1.21□□□□□ -2.22
TRAPPC13-208ENST00000505553 H0YGG7 62 aa1.2□□□□□ -2.22
TRAPPC13-208ENST00000505553 SIX6O95475 246 aa1.2□□□□□ -2.22
TRAPPC13-208ENST00000505553 AQP10Q96PS8 301 aa1.2□□□□□ -2.22
TRAPPC13-208ENST00000505553 BPESC1Q9GZL8 116 aa1.2□□□□□ -2.22
TRAPPC13-208ENST00000505553 V9GYV3 84 aa1.2□□□□□ -2.22
TRAPPC13-208ENST00000505553 DNAH1Q9P2D7 4330 aa1.19□□□□□ -2.22
TRAPPC13-208ENST00000505553 CLPSL1A2RUU4 121 aa1.19□□□□□ -2.22
TRAPPC13-208ENST00000505553 FAM24AA6NFZ4 105 aa1.19□□□□□ -2.22
TRAPPC13-208ENST00000505553 HCG22E2RYF7 251 aa1.19□□□□□ -2.22
TRAPPC13-208ENST00000505553 SNCAP37840 140 aa1.19□□□□□ -2.22
TRAPPC13-208ENST00000505553 SSSCA1O60232 199 aa1.18□□□□□ -2.22
TRAPPC13-208ENST00000505553 SNRNP200O75643 2136 aaKnown RBP1.18□□□□□ -2.22
TRAPPC13-208ENST00000505553 C5orf38Q86SI9 138 aa1.18□□□□□ -2.22
TRAPPC13-208ENST00000505553 TTC9CQ8N5M4 171 aa1.18□□□□□ -2.22
TRAPPC13-208ENST00000505553 PRO1933Q9H354 126 aa1.18□□□□□ -2.22
TRAPPC13-208ENST00000505553 LINC00312Q9Y6C7 94 aa1.18□□□□□ -2.22
TRAPPC13-208ENST00000505553 ABCA13Q86UQ4 5058 aa1.18□□□□□ -2.22
TRAPPC13-208ENST00000505553 PLCE1Q9P212 2302 aa1.18□□□□□ -2.22
TRAPPC13-208ENST00000505553 SACSQ9NZJ4 4579 aa1.18□□□□□ -2.22
TRAPPC13-208ENST00000505553 MED12Q93074 2177 aa1.17□□□□□ -2.22
TRAPPC13-208ENST00000505553 LY6G6CO95867 125 aa1.17□□□□□ -2.22
TRAPPC13-208ENST00000505553 ATP5EP56381 51 aaPredicted RBP1.17□□□□□ -2.22
TRAPPC13-208ENST00000505553 EDDM3BP56851 147 aa1.17□□□□□ -2.22
TRAPPC13-208ENST00000505553 RPL37P61927 97 aaKnown RBP1.17□□□□□ -2.22
TRAPPC13-208ENST00000505553 DYNLRB1Q9NP97 96 aa1.17□□□□□ -2.22
TRAPPC13-208ENST00000505553 AP4S1Q9Y587 144 aa1.17□□□□□ -2.22
TRAPPC13-208ENST00000505553 V9GYS6 101 aa1.17□□□□□ -2.22
TRAPPC13-208ENST00000505553 KIAA1109Q2LD37 5005 aa1.17□□□□□ -2.22
TRAPPC13-208ENST00000505553 COL7A1Q02388 2944 aa1.17□□□□□ -2.22
TRAPPC13-208ENST00000505553 A0A087WTM6 91 aa1.16□□□□□ -2.22
TRAPPC13-208ENST00000505553 SPINK9Q5DT21 86 aa1.16□□□□□ -2.22
TRAPPC13-208ENST00000505553 COMMD6Q7Z4G1 85 aa1.16□□□□□ -2.22
TRAPPC13-208ENST00000505553 C9orf62Q8N4C0 152 aa1.16□□□□□ -2.22
TRAPPC13-208ENST00000505553 VAMP8Q9BV40 100 aa1.16□□□□□ -2.22
TRAPPC13-208ENST00000505553 DPY30Q9C005 99 aa1.16□□□□□ -2.22
TRAPPC13-208ENST00000505553 CYP4F30PQ9H0H9 118 aa1.16□□□□□ -2.22
TRAPPC13-208ENST00000505553 CMYA5Q8N3K9 4069 aa1.16□□□□□ -2.22
TRAPPC13-208ENST00000505553 UBE2L5PA0A1B0GUS4 154 aa1.15□□□□□ -2.22
TRAPPC13-208ENST00000505553 TMEM262E9PQX1 116 aa1.15□□□□□ -2.22
TRAPPC13-208ENST00000505553 LYNX1G3V0Z9 82 aa1.15□□□□□ -2.22
TRAPPC13-208ENST00000505553 CCL22O00626 93 aa1.15□□□□□ -2.22
TRAPPC13-208ENST00000505553 GNGT2O14610 69 aa1.15□□□□□ -2.22
TRAPPC13-208ENST00000505553 MT-ATP8P03928 68 aa1.15□□□□□ -2.22
TRAPPC13-208ENST00000505553 UBE2L3P68036 154 aaKnown RBP1.15□□□□□ -2.22
TRAPPC13-208ENST00000505553 PROK2Q9HC23 129 aa1.15□□□□□ -2.22
TRAPPC13-208ENST00000505553 SCP2D1Q9UJQ7 156 aa1.15□□□□□ -2.22
TRAPPC13-208ENST00000505553 DMBT1Q9UGM3 2413 aaPredicted RBP1.15□□□□□ -2.22
TRAPPC13-208ENST00000505553 GPR98Q8WXG9 6306 aa1.15□□□□□ -2.23
TRAPPC13-208ENST00000505553 LOC285095A0A1B0GVY8 99 aa1.15□□□□□ -2.23
TRAPPC13-208ENST00000505553 F2Z2F3 143 aa1.15□□□□□ -2.23
TRAPPC13-208ENST00000505553 LINC00032P0C843 101 aa1.15□□□□□ -2.23
TRAPPC13-208ENST00000505553 C10orf128Q5T292 105 aa1.15□□□□□ -2.23
TRAPPC13-208ENST00000505553 NCBP2-AS2Q69YL0 99 aa1.15□□□□□ -2.23
TRAPPC13-208ENST00000505553 DPH3P1Q9H4G8 78 aa1.15□□□□□ -2.23
TRAPPC13-208ENST00000505553 DNAH9Q9NYC9 4486 aa1.14□□□□□ -2.23
TRAPPC13-208ENST00000505553 HERC1Q15751 4861 aa1.14□□□□□ -2.23
TRAPPC13-208ENST00000505553 WNK2Q9Y3S1 2297 aa1.14□□□□□ -2.23
TRAPPC13-208ENST00000505553 ZNF137PP52743 207 aa1.14□□□□□ -2.23
TRAPPC13-208ENST00000505553 DEFB112Q30KQ8 113 aa1.14□□□□□ -2.23
TRAPPC13-208ENST00000505553 DEFB108BQ8NET1 73 aa1.14□□□□□ -2.23
TRAPPC13-208ENST00000505553 MYOZ3Q8TDC0 251 aa1.14□□□□□ -2.23
TRAPPC13-208ENST00000505553 PMCHL2Q9BQD1 86 aa1.14□□□□□ -2.23
TRAPPC13-208ENST00000505553 PYY3Q5JQD4 70 aa1.13□□□□□ -2.23
TRAPPC13-208ENST00000505553 ALMS1Q8TCU4 4167 aa1.12□□□□□ -2.23
TRAPPC13-208ENST00000505553 hADV29S1A0JD25 119 aa1.12□□□□□ -2.23
TRAPPC13-208ENST00000505553 MRPL33O75394 65 aaKnown RBP1.12□□□□□ -2.23
TRAPPC13-208ENST00000505553 FAUP35544 74 aaKnown RBP1.12□□□□□ -2.23
TRAPPC13-208ENST00000505553 GNG11P61952 73 aa1.12□□□□□ -2.23
TRAPPC13-208ENST00000505553 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.12□□□□□ -2.23
TRAPPC13-208ENST00000505553 WFDC9Q8NEX5 89 aa1.12□□□□□ -2.23
TRAPPC13-208ENST00000505553 LINC00474Q9P2X8 69 aa1.12□□□□□ -2.23
TRAPPC13-208ENST00000505553 LENEPQ9Y5L5 61 aa1.12□□□□□ -2.23
TRAPPC13-208ENST00000505553 MUC5BQ9HC84 5762 aaPredicted RBP1.12□□□□□ -2.23
TRAPPC13-208ENST00000505553 IGLC1P0CG04 106 aa1.11□□□□□ -2.23
TRAPPC13-208ENST00000505553 ACYP2P14621 99 aa1.11□□□□□ -2.23
TRAPPC13-208ENST00000505553 FAM213BQ8TBF2 198 aa1.11□□□□□ -2.23
TRAPPC13-208ENST00000505553 SMIM11BQ8TCY0 68 aa1.11□□□□□ -2.23
TRAPPC13-208ENST00000505553 Q96NJ1 140 aa1.11□□□□□ -2.23
TRAPPC13-208ENST00000505553 LYSTQ99698 3801 aa1.11□□□□□ -2.23
TRAPPC13-208ENST00000505553 WFDC6Q9BQY6 131 aa1.11□□□□□ -2.23
TRAPPC13-208ENST00000505553 NPVFQ9HCQ7 196 aa1.11□□□□□ -2.23
TRAPPC13-208ENST00000505553 HECTD4Q9Y4D8 3996 aa1.11□□□□□ -2.23
TRAPPC13-208ENST00000505553 PLECQ15149 4684 aaKnown RBP1.1□□□□□ -2.23
TRAPPC13-208ENST00000505553 STARD9Q9P2P6 4700 aa1.1□□□□□ -2.23
TRAPPC13-208ENST00000505553 DNAH3Q8TD57 4116 aa1.1□□□□□ -2.23
TRAPPC13-208ENST00000505553 H3BQ15 152 aa1.1□□□□□ -2.23
TRAPPC13-208ENST00000505553 H3BQF6 201 aa1.1□□□□□ -2.23
TRAPPC13-208ENST00000505553 PPP1R17O96001 155 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms