RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 MIEN1Q9BRT3 115 aa6.79□□□□□ -1.32
SNHG4-202ENST00000505522 TRAV23DV6A0A075B6W5 121 aa6.78□□□□□ -1.32
SNHG4-202ENST00000505522 SLC25A20O43772 301 aa6.78□□□□□ -1.32
SNHG4-202ENST00000505522 FABP4P15090 132 aa6.78□□□□□ -1.32
SNHG4-202ENST00000505522 LGALS3P17931 250 aaKnown RBP6.78□□□□□ -1.32
SNHG4-202ENST00000505522 HERVK_113P61574 105 aa6.78□□□□□ -1.32
SNHG4-202ENST00000505522 NPC2P61916 151 aa6.78□□□□□ -1.32
SNHG4-202ENST00000505522 IGKCP01834 107 aa6.77□□□□□ -1.33
SNHG4-202ENST00000505522 ADAMTSL4-AS1Q5T5F5 129 aa6.77□□□□□ -1.33
SNHG4-202ENST00000505522 HSPB8Q9UJY1 196 aa6.77□□□□□ -1.33
SNHG4-202ENST00000505522 ZNF73O43830 326 aaPredicted RBP6.76□□□□□ -1.33
SNHG4-202ENST00000505522 LINC01547P58512 204 aaPredicted RBP6.76□□□□□ -1.33
SNHG4-202ENST00000505522 JOSD1Q15040 202 aaPredicted RBP6.76□□□□□ -1.33
SNHG4-202ENST00000505522 C9orf153Q5TBE3 101 aa6.76□□□□□ -1.33
SNHG4-202ENST00000505522 ST20-AS1Q8NBB2 130 aa6.76□□□□□ -1.33
SNHG4-202ENST00000505522 A0A0J9YXY3 114 aa6.75□□□□□ -1.33
SNHG4-202ENST00000505522 XP32Q5T750 250 aa6.75□□□□□ -1.33
SNHG4-202ENST00000505522 E9PLD3 99 aa6.72□□□□□ -1.33
SNHG4-202ENST00000505522 C5orf52A6NGY3 159 aa6.71□□□□□ -1.34
SNHG4-202ENST00000505522 LITAFQ99732 161 aa6.71□□□□□ -1.34
SNHG4-202ENST00000505522 COLCA2A8K830 154 aa6.69□□□□□ -1.34
SNHG4-202ENST00000505522 SPRR1BP22528 89 aa6.69□□□□□ -1.34
SNHG4-202ENST00000505522 HINT1P49773 126 aaPredicted RBP6.69□□□□□ -1.34
SNHG4-202ENST00000505522 LCE2CQ5TA81 110 aa6.69□□□□□ -1.34
SNHG4-202ENST00000505522 HRCT1Q6UXD1 115 aa6.69□□□□□ -1.34
SNHG4-202ENST00000505522 LINC00308Q8TCZ7 52 aa6.69□□□□□ -1.34
SNHG4-202ENST00000505522 OR13C6PQ8NH95 151 aa6.68□□□□□ -1.34
SNHG4-202ENST00000505522 SPANXCQ9NY87 97 aa6.68□□□□□ -1.34
SNHG4-202ENST00000505522 CBY1Q9Y3M2 126 aa6.68□□□□□ -1.34
SNHG4-202ENST00000505522 SYS1-DBNDD2H3BUS1 97 aa6.67□□□□□ -1.34
SNHG4-202ENST00000505522 TIMM17BO60830 172 aa6.66□□□□□ -1.34
SNHG4-202ENST00000505522 KRTAP19-2Q3LHN2 52 aa6.66□□□□□ -1.34
SNHG4-202ENST00000505522 LIMD2Q9BT23 127 aa6.66□□□□□ -1.34
SNHG4-202ENST00000505522 DHRS4-AS1Q9P1J3 65 aa6.66□□□□□ -1.34
SNHG4-202ENST00000505522 C9orf92A6NGG3 77 aa6.65□□□□□ -1.34
SNHG4-202ENST00000505522 PCOTHQ58A44 107 aa6.65□□□□□ -1.34
SNHG4-202ENST00000505522 SLC25A34Q6PIV7 304 aa6.65□□□□□ -1.34
SNHG4-202ENST00000505522 SLC7A5P1Q8MH63 180 aa6.65□□□□□ -1.34
SNHG4-202ENST00000505522 SPANXDQ9BXN6 97 aa6.65□□□□□ -1.34
SNHG4-202ENST00000505522 LAMTOR3Q9UHA4 124 aa6.65□□□□□ -1.34
SNHG4-202ENST00000505522 COX7BP24311 80 aa6.64□□□□□ -1.35
SNHG4-202ENST00000505522 ELOF1P60002 83 aaKnown RBP6.64□□□□□ -1.35
SNHG4-202ENST00000505522 LINC01545Q5VT33 79 aa6.64□□□□□ -1.35
SNHG4-202ENST00000505522 TTTY13Q9BZ97 58 aa6.64□□□□□ -1.35
SNHG4-202ENST00000505522 ZNF815PA8K554 130 aa6.63□□□□□ -1.35
SNHG4-202ENST00000505522 C6orf99Q4VX62 202 aa6.63□□□□□ -1.35
SNHG4-202ENST00000505522 IGLV8-61A0A075B6I0 122 aa6.62□□□□□ -1.35
SNHG4-202ENST00000505522 TAL2Q16559 108 aa6.62□□□□□ -1.35
SNHG4-202ENST00000505522 Q1RN00 199 aa6.62□□□□□ -1.35
SNHG4-202ENST00000505522 DEFB105AQ8NG35 78 aa6.62□□□□□ -1.35
SNHG4-202ENST00000505522 LOC100996750A0A140TA64 210 aa6.61□□□□□ -1.35
SNHG4-202ENST00000505522 HIST1H2BKO60814 126 aa6.61□□□□□ -1.35
SNHG4-202ENST00000505522 HIST1H2BJP06899 126 aa6.61□□□□□ -1.35
SNHG4-202ENST00000505522 HIST1H2BOP23527 126 aa6.61□□□□□ -1.35
SNHG4-202ENST00000505522 HIST1H2BBP33778 126 aa6.61□□□□□ -1.35
SNHG4-202ENST00000505522 HIST1H2BDP58876 126 aa6.61□□□□□ -1.35
SNHG4-202ENST00000505522 HIST1H2BCP62807 126 aa6.61□□□□□ -1.35
SNHG4-202ENST00000505522 MT1HP80294 61 aa6.61□□□□□ -1.35
SNHG4-202ENST00000505522 CD164Q04900 197 aa6.61□□□□□ -1.35
SNHG4-202ENST00000505522 HIST2H2BEQ16778 126 aa6.61□□□□□ -1.35
SNHG4-202ENST00000505522 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.61□□□□□ -1.35
SNHG4-202ENST00000505522 LINC00518Q8N0U6 118 aa6.61□□□□□ -1.35
SNHG4-202ENST00000505522 HIST1H2BHQ93079 126 aa6.61□□□□□ -1.35
SNHG4-202ENST00000505522 HIST1H2BNQ99877 126 aa6.61□□□□□ -1.35
SNHG4-202ENST00000505522 HIST1H2BMQ99879 126 aa6.61□□□□□ -1.35
SNHG4-202ENST00000505522 KRTAP4-6Q9BYQ5 205 aa6.61□□□□□ -1.35
SNHG4-202ENST00000505522 H7C2G1 150 aa6.6□□□□□ -1.35
SNHG4-202ENST00000505522 PET117Q6UWS5 81 aa6.6□□□□□ -1.35
SNHG4-202ENST00000505522 TEX49A0A1B0GTD5 131 aa6.59□□□□□ -1.35
SNHG4-202ENST00000505522 SMIM29Q86T20 159 aa6.59□□□□□ -1.35
SNHG4-202ENST00000505522 PRO1933Q9H354 126 aa6.59□□□□□ -1.35
SNHG4-202ENST00000505522 TRBV7-6A0A0J9YX20 115 aa6.58□□□□□ -1.36
SNHG4-202ENST00000505522 C3orf79P0CE67 100 aa6.58□□□□□ -1.36
SNHG4-202ENST00000505522 SMCPP49901 116 aaPredicted RBP6.58□□□□□ -1.36
SNHG4-202ENST00000505522 CRCT1Q9UGL9 99 aa6.58□□□□□ -1.36
SNHG4-202ENST00000505522 A0A0G2JQZ4 141 aa6.57□□□□□ -1.36
SNHG4-202ENST00000505522 C1orf195Q5TG92 126 aa6.56□□□□□ -1.36
SNHG4-202ENST00000505522 Q5XG85 94 aa6.56□□□□□ -1.36
SNHG4-202ENST00000505522 IGLV5-48A0A075B6I7 105 aa6.55□□□□□ -1.36
SNHG4-202ENST00000505522 A0A1B0GWB2 263 aa6.55□□□□□ -1.36
SNHG4-202ENST00000505522 AKR1D1P51857 326 aa6.55□□□□□ -1.36
SNHG4-202ENST00000505522 SCGB1D4Q6XE38 83 aa6.55□□□□□ -1.36
SNHG4-202ENST00000505522 A6NDN8 102 aa6.54□□□□□ -1.36
SNHG4-202ENST00000505522 ANKRD39Q53RE8 183 aa6.54□□□□□ -1.36
SNHG4-202ENST00000505522 IFITM1P13164 125 aa6.53□□□□□ -1.36
SNHG4-202ENST00000505522 KRTDAPP60985 99 aa6.53□□□□□ -1.36
SNHG4-202ENST00000505522 CFC1BP0CG36 223 aa6.52□□□□□ -1.37
SNHG4-202ENST00000505522 MUSTN1Q8IVN3 82 aa6.52□□□□□ -1.37
SNHG4-202ENST00000505522 LORP23490 312 aaPredicted RBP6.51□□□□□ -1.37
SNHG4-202ENST00000505522 KRTAP10-6P60371 365 aaPredicted RBP6.51□□□□□ -1.37
SNHG4-202ENST00000505522 RPL37P61927 97 aaKnown RBP6.51□□□□□ -1.37
SNHG4-202ENST00000505522 ATOH7Q8N100 152 aa6.51□□□□□ -1.37
SNHG4-202ENST00000505522 COPS9Q8WXC6 57 aa6.51□□□□□ -1.37
SNHG4-202ENST00000505522 COA6Q5JTJ3 125 aaKnown RBP6.5□□□□□ -1.37
SNHG4-202ENST00000505522 Q6ZVH6 145 aa6.5□□□□□ -1.37
SNHG4-202ENST00000505522 PCP2Q8IVA1 136 aa6.5□□□□□ -1.37
SNHG4-202ENST00000505522 A4D1N5 150 aa6.49□□□□□ -1.37
SNHG4-202ENST00000505522 SMIM11BQ8TCY0 68 aa6.49□□□□□ -1.37
SNHG4-202ENST00000505522 C20orf202A1L168 122 aa6.48□□□□□ -1.37
SNHG4-202ENST00000505522 TRAV13-2A0A0B4J235 113 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms