RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 TYMSOSQ8TAI1 123 aa14.93□□□□□ -0.02
PVT1-201ENST00000504719 HIGD2AQ9BW72 106 aa14.93□□□□□ -0.02
PVT1-201ENST00000504719 ETDCA0A1B0GVM5 59 aa14.92□□□□□ -0.02
PVT1-201ENST00000504719 KRTAP4-16G5E9R7 235 aaPredicted RBP14.92□□□□□ -0.02
PVT1-201ENST00000504719 FAM229BQ4G0N7 80 aa14.89□□□□□ -0.03
PVT1-201ENST00000504719 KRTAP13-2Q52LG2 175 aa14.89□□□□□ -0.03
PVT1-201ENST00000504719 TRAV23DV6A0A075B6W5 121 aa14.88□□□□□ -0.03
PVT1-201ENST00000504719 RNF213Q63HN8 5207 aa14.88□□□□□ -0.03
PVT1-201ENST00000504719 IFITM1P13164 125 aa14.87□□□□□ -0.03
PVT1-201ENST00000504719 Q6ZVH6 145 aa14.87□□□□□ -0.03
PVT1-201ENST00000504719 OR13C6PQ8NH95 151 aa14.87□□□□□ -0.03
PVT1-201ENST00000504719 COPS9Q8WXC6 57 aa14.87□□□□□ -0.03
PVT1-201ENST00000504719 B5MCH6 92 aa14.86□□□□□ -0.03
PVT1-201ENST00000504719 TSPAN13O95857 204 aa14.86□□□□□ -0.03
PVT1-201ENST00000504719 PRR4Q16378 134 aa14.85□□□□□ -0.03
PVT1-201ENST00000504719 MUSTN1Q8IVN3 82 aa14.84□□□□□ -0.03
PVT1-201ENST00000504719 LINC00518Q8N0U6 118 aa14.84□□□□□ -0.03
PVT1-201ENST00000504719 PPDPFQ9H3Y8 114 aa14.83□□□□□ -0.04
PVT1-201ENST00000504719 ZNF73O43830 326 aaPredicted RBP14.82□□□□□ -0.04
PVT1-201ENST00000504719 SMCR5Q8TEV8 140 aa14.82□□□□□ -0.04
PVT1-201ENST00000504719 CBY1Q9Y3M2 126 aa14.82□□□□□ -0.04
PVT1-201ENST00000504719 TMA7Q9Y2S6 64 aaKnown RBP14.81□□□□□ -0.04
PVT1-201ENST00000504719 Q6ZRX8 168 aa14.8□□□□□ -0.04
PVT1-201ENST00000504719 SPRR4Q96PI1 79 aa14.79□□□□□ -0.04
PVT1-201ENST00000504719 JOSD1Q15040 202 aaPredicted RBP14.78□□□□□ -0.04
PVT1-201ENST00000504719 Q9BRP9 147 aa14.78□□□□□ -0.04
PVT1-201ENST00000504719 COX8AP10176 69 aa14.77□□□□□ -0.05
PVT1-201ENST00000504719 ZNF706Q9Y5V0 76 aaPredicted RBP14.77□□□□□ -0.05
PVT1-201ENST00000504719 LINC00304Q8N9R0 145 aa14.76□□□□□ -0.05
PVT1-201ENST00000504719 PAM16Q9Y3D7 125 aa14.76□□□□□ -0.05
PVT1-201ENST00000504719 ERC2-IT1O76042 136 aa14.74□□□□□ -0.05
PVT1-201ENST00000504719 HINT1P49773 126 aaPredicted RBP14.74□□□□□ -0.05
PVT1-201ENST00000504719 SPATA45Q537H7 98 aa14.73□□□□□ -0.05
PVT1-201ENST00000504719 VAMP8Q9BV40 100 aa14.73□□□□□ -0.05
PVT1-201ENST00000504719 A6NDN8 102 aa14.72□□□□□ -0.05
PVT1-201ENST00000504719 C3orf22Q8N5N4 141 aa14.71□□□□□ -0.05
PVT1-201ENST00000504719 C14orf144Q96I85 54 aa14.71□□□□□ -0.05
PVT1-201ENST00000504719 DLEU1O43261 78 aa14.7□□□□□ -0.06
PVT1-201ENST00000504719 C6orf99Q4VX62 202 aa14.68□□□□□ -0.06
PVT1-201ENST00000504719 TRAV13-2A0A0B4J235 113 aa14.67□□□□□ -0.06
PVT1-201ENST00000504719 CTAG1AP78358 180 aa14.67□□□□□ -0.06
PVT1-201ENST00000504719 GAGE2AQ6NT46 116 aa14.67□□□□□ -0.06
PVT1-201ENST00000504719 HIST1H4GQ99525 98 aa14.67□□□□□ -0.06
PVT1-201ENST00000504719 A4D1N5 150 aa14.65□□□□□ -0.06
PVT1-201ENST00000504719 LINC00483Q53H64 154 aa14.65□□□□□ -0.06
PVT1-201ENST00000504719 PYY3Q5JQD4 70 aa14.65□□□□□ -0.06
PVT1-201ENST00000504719 COX7BP24311 80 aa14.64□□□□□ -0.07
PVT1-201ENST00000504719 ELOF1P60002 83 aaKnown RBP14.64□□□□□ -0.07
PVT1-201ENST00000504719 SLC25A34Q6PIV7 304 aa14.62□□□□□ -0.07
PVT1-201ENST00000504719 RETNLBQ9BQ08 111 aa14.62□□□□□ -0.07
PVT1-201ENST00000504719 DHRS4-AS1Q9P1J3 65 aa14.61□□□□□ -0.07
PVT1-201ENST00000504719 TRBV7-6A0A0J9YX20 115 aa14.6□□□□□ -0.07
PVT1-201ENST00000504719 ST20-AS1Q8NBB2 130 aa14.6□□□□□ -0.07
PVT1-201ENST00000504719 SMIM11BQ8TCY0 68 aa14.59□□□□□ -0.07
PVT1-201ENST00000504719 HIGD1BQ9P298 99 aa14.59□□□□□ -0.07
PVT1-201ENST00000504719 SPAG11AQ6PDA7 123 aa14.57□□□□□ -0.08
PVT1-201ENST00000504719 C2orf91Q6ZV80 131 aa14.57□□□□□ -0.08
PVT1-201ENST00000504719 C12orf57Q99622 126 aa14.57□□□□□ -0.08
PVT1-201ENST00000504719 A0A1B0GWB2 263 aa14.55□□□□□ -0.08
PVT1-201ENST00000504719 IGLV9-49A0A0B4J1Y8 123 aa14.54□□□□□ -0.08
PVT1-201ENST00000504719 Q8NBF4 154 aa14.52□□□□□ -0.09
PVT1-201ENST00000504719 C4orf48Q5BLP8 95 aa14.51□□□□□ -0.09
PVT1-201ENST00000504719 MOBPQ13875 183 aa14.5□□□□□ -0.09
PVT1-201ENST00000504719 IGLV7-46A0A075B6I9 117 aa14.49□□□□□ -0.09
PVT1-201ENST00000504719 TPRXLQ17RH7 258 aa14.47□□□□□ -0.09
PVT1-201ENST00000504719 CFC1BP0CG36 223 aa14.46□□□□□ -0.09
PVT1-201ENST00000504719 CFC1P0CG37 223 aa14.46□□□□□ -0.09
PVT1-201ENST00000504719 SPRR1BP22528 89 aa14.46□□□□□ -0.09
PVT1-201ENST00000504719 VAMP3Q15836 100 aa14.46□□□□□ -0.09
PVT1-201ENST00000504719 TAL2Q16559 108 aa14.45□□□□□ -0.1
PVT1-201ENST00000504719 DEFB105AQ8NG35 78 aa14.45□□□□□ -0.1
PVT1-201ENST00000504719 C9orf153Q5TBE3 101 aa14.44□□□□□ -0.1
PVT1-201ENST00000504719 SSBP3-AS1Q7Z2R9 100 aa14.44□□□□□ -0.1
PVT1-201ENST00000504719 CEND1Q8N111 149 aa14.44□□□□□ -0.1
PVT1-201ENST00000504719 SPINK1P00995 79 aa14.43□□□□□ -0.1
PVT1-201ENST00000504719 RAB37Q96AX2 223 aa14.43□□□□□ -0.1
PVT1-201ENST00000504719 NHP2Q9NX24 153 aaKnown RBP14.43□□□□□ -0.1
PVT1-201ENST00000504719 MUC2Q02817 5179 aa14.41□□□□□ -0.1
PVT1-201ENST00000504719 H7C2G1 150 aa14.4□□□□□ -0.1
PVT1-201ENST00000504719 CDIP1Q9H305 208 aa14.4□□□□□ -0.1
PVT1-201ENST00000504719 A0A0B4J2C4 111 aa14.39□□□□□ -0.11
PVT1-201ENST00000504719 TEX49A0A1B0GTD5 131 aa14.39□□□□□ -0.11
PVT1-201ENST00000504719 SLC25A20O43772 301 aa14.39□□□□□ -0.11
PVT1-201ENST00000504719 LINC00575Q6W349 94 aa14.39□□□□□ -0.11
PVT1-201ENST00000504719 FP248Q71RG6 208 aaPredicted RBP14.39□□□□□ -0.11
PVT1-201ENST00000504719 LAMTOR3Q9UHA4 124 aa14.39□□□□□ -0.11
PVT1-201ENST00000504719 TMEM238LA0A1B0GVL6 79 aa14.37□□□□□ -0.11
PVT1-201ENST00000504719 A6NJY4 79 aa14.37□□□□□ -0.11
PVT1-201ENST00000504719 IGLV5-48A0A075B6I7 105 aa14.36□□□□□ -0.11
PVT1-201ENST00000504719 FXYD2P54710 66 aa14.36□□□□□ -0.11
PVT1-201ENST00000504719 LINC01547P58512 204 aaPredicted RBP14.36□□□□□ -0.11
PVT1-201ENST00000504719 Q1RN00 199 aa14.36□□□□□ -0.11
PVT1-201ENST00000504719 BVES-AS1Q5T3Y7 98 aa14.36□□□□□ -0.11
PVT1-201ENST00000504719 UQCR10Q9UDW1 63 aa14.36□□□□□ -0.11
PVT1-201ENST00000504719 MUC17Q685J3 4493 aa14.35□□□□□ -0.11
PVT1-201ENST00000504719 HSD52Q0P140 79 aa14.34□□□□□ -0.11
PVT1-201ENST00000504719 hADV29S1A0JD25 119 aa14.33□□□□□ -0.12
PVT1-201ENST00000504719 RPS29P62273 56 aaKnown RBP14.33□□□□□ -0.12
PVT1-201ENST00000504719 SMIM29Q86T20 159 aa14.31□□□□□ -0.12
PVT1-201ENST00000504719 Q8N377 158 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms