RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 S100A12P80511 92 aa15.08■□□□□ 0
LSM6-202ENST00000502781 LINC00518Q8N0U6 118 aa15.08■□□□□ 0
LSM6-202ENST00000502781 TNXBP22105 4242 aa15.08■□□□□ 0
LSM6-202ENST00000502781 HERC1Q15751 4861 aa15.07■□□□□ 0
LSM6-202ENST00000502781 KRTAP10-8P60410 259 aa15.07■□□□□ 0
LSM6-202ENST00000502781 C14orf144Q96I85 54 aa15.04■□□□□ -0
LSM6-202ENST00000502781 TRAV23DV6A0A075B6W5 121 aa15.03■□□□□ -0
LSM6-202ENST00000502781 ETDCA0A1B0GVM5 59 aa15.02■□□□□ -0
LSM6-202ENST00000502781 CBY1Q9Y3M2 126 aa15.01□□□□□ -0.01
LSM6-202ENST00000502781 B5MCH6 92 aa15□□□□□ -0.01
LSM6-202ENST00000502781 OR13C6PQ8NH95 151 aa15□□□□□ -0.01
LSM6-202ENST00000502781 ZNF73O43830 326 aaPredicted RBP14.99□□□□□ -0.01
LSM6-202ENST00000502781 HIGD2AQ9BW72 106 aa14.99□□□□□ -0.01
LSM6-202ENST00000502781 SLC25A34Q6PIV7 304 aa14.98□□□□□ -0.01
LSM6-202ENST00000502781 PRR26Q8N8Z3 221 aa14.98□□□□□ -0.01
LSM6-202ENST00000502781 Q6ZRX8 168 aa14.97□□□□□ -0.01
LSM6-202ENST00000502781 HIGD1BQ9P298 99 aa14.97□□□□□ -0.01
LSM6-202ENST00000502781 C2orf91Q6ZV80 131 aa14.95□□□□□ -0.02
LSM6-202ENST00000502781 SMCR5Q8TEV8 140 aa14.95□□□□□ -0.02
LSM6-202ENST00000502781 HIST1H4GQ99525 98 aa14.94□□□□□ -0.02
LSM6-202ENST00000502781 A4D1N5 150 aa14.93□□□□□ -0.02
LSM6-202ENST00000502781 Q9BRP9 147 aa14.92□□□□□ -0.02
LSM6-202ENST00000502781 TRAV13-2A0A0B4J235 113 aa14.91□□□□□ -0.02
LSM6-202ENST00000502781 A0A087X002 238 aa14.9□□□□□ -0.02
LSM6-202ENST00000502781 A6NDN8 102 aa14.9□□□□□ -0.02
LSM6-202ENST00000502781 RPL13AP40429 203 aaKnown RBP14.9□□□□□ -0.02
LSM6-202ENST00000502781 ANAPC11Q9NYG5 84 aa14.9□□□□□ -0.02
LSM6-202ENST00000502781 FAM229BQ4G0N7 80 aa14.89□□□□□ -0.03
LSM6-202ENST00000502781 SPRR4Q96PI1 79 aa14.88□□□□□ -0.03
LSM6-202ENST00000502781 CRYGAP11844 174 aa14.87□□□□□ -0.03
LSM6-202ENST00000502781 HINT1P49773 126 aaPredicted RBP14.87□□□□□ -0.03
LSM6-202ENST00000502781 ERC2-IT1O76042 136 aa14.86□□□□□ -0.03
LSM6-202ENST00000502781 C6orf99Q4VX62 202 aa14.86□□□□□ -0.03
LSM6-202ENST00000502781 ZNF706Q9Y5V0 76 aaPredicted RBP14.85□□□□□ -0.03
LSM6-202ENST00000502781 TRBV7-6A0A0J9YX20 115 aa14.84□□□□□ -0.03
LSM6-202ENST00000502781 ELOF1P60002 83 aaKnown RBP14.84□□□□□ -0.03
LSM6-202ENST00000502781 TAL2Q16559 108 aa14.84□□□□□ -0.03
LSM6-202ENST00000502781 KRTAP13-2Q52LG2 175 aa14.83□□□□□ -0.04
LSM6-202ENST00000502781 SMIM11BQ8TCY0 68 aa14.81□□□□□ -0.04
LSM6-202ENST00000502781 COX7BP24311 80 aa14.8□□□□□ -0.04
LSM6-202ENST00000502781 LINC00483Q53H64 154 aa14.8□□□□□ -0.04
LSM6-202ENST00000502781 DHRS4-AS1Q9P1J3 65 aa14.79□□□□□ -0.04
LSM6-202ENST00000502781 C12orf57Q99622 126 aa14.78□□□□□ -0.04
LSM6-202ENST00000502781 A0A1B0GWB2 263 aa14.77□□□□□ -0.04
LSM6-202ENST00000502781 CEND1Q8N111 149 aa14.77□□□□□ -0.04
LSM6-202ENST00000502781 CFC1BP0CG36 223 aa14.76□□□□□ -0.05
LSM6-202ENST00000502781 CFC1P0CG37 223 aa14.76□□□□□ -0.05
LSM6-202ENST00000502781 TYMSOSQ8TAI1 123 aa14.76□□□□□ -0.05
LSM6-202ENST00000502781 UQCR10Q9UDW1 63 aa14.76□□□□□ -0.05
LSM6-202ENST00000502781 SMIM6P0DI80 62 aa14.73□□□□□ -0.05
LSM6-202ENST00000502781 GAGE2AQ6NT46 116 aa14.73□□□□□ -0.05
LSM6-202ENST00000502781 A0A0B4J2C4 111 aa14.73□□□□□ -0.05
LSM6-202ENST00000502781 C3orf22Q8N5N4 141 aa14.72□□□□□ -0.05
LSM6-202ENST00000502781 HMCN2Q8NDA2 5059 aa14.71□□□□□ -0.06
LSM6-202ENST00000502781 HSD52Q0P140 79 aa14.71□□□□□ -0.06
LSM6-202ENST00000502781 ST20-AS1Q8NBB2 130 aa14.71□□□□□ -0.06
LSM6-202ENST00000502781 LOC105371267A0A1B0GV96 52 aa14.7□□□□□ -0.06
LSM6-202ENST00000502781 FXYD2P54710 66 aa14.7□□□□□ -0.06
LSM6-202ENST00000502781 TMEM238LA0A1B0GVL6 79 aa14.68□□□□□ -0.06
LSM6-202ENST00000502781 A6NJY4 79 aa14.68□□□□□ -0.06
LSM6-202ENST00000502781 RAB37Q96AX2 223 aa14.67□□□□□ -0.06
LSM6-202ENST00000502781 SPRR1BP22528 89 aa14.66□□□□□ -0.06
LSM6-202ENST00000502781 VAMP3Q15836 100 aa14.65□□□□□ -0.06
LSM6-202ENST00000502781 PRO1933Q9H354 126 aa14.62□□□□□ -0.07
LSM6-202ENST00000502781 LINC00575Q6W349 94 aa14.61□□□□□ -0.07
LSM6-202ENST00000502781 NHP2Q9NX24 153 aaKnown RBP14.61□□□□□ -0.07
LSM6-202ENST00000502781 BVES-AS1Q5T3Y7 98 aa14.6□□□□□ -0.07
LSM6-202ENST00000502781 LINC00304Q8N9R0 145 aa14.6□□□□□ -0.07
LSM6-202ENST00000502781 PRO1854Q9UHT4 67 aa14.6□□□□□ -0.07
LSM6-202ENST00000502781 H7C2G1 150 aa14.6□□□□□ -0.07
LSM6-202ENST00000502781 LINC01547P58512 204 aaPredicted RBP14.58□□□□□ -0.08
LSM6-202ENST00000502781 IGLV5-48A0A075B6I7 105 aa14.57□□□□□ -0.08
LSM6-202ENST00000502781 SLC25A20O43772 301 aa14.56□□□□□ -0.08
LSM6-202ENST00000502781 CTAG1AP78358 180 aa14.56□□□□□ -0.08
LSM6-202ENST00000502781 IGLV9-49A0A0B4J1Y8 123 aa14.55□□□□□ -0.08
LSM6-202ENST00000502781 TEX49A0A1B0GTD5 131 aa14.55□□□□□ -0.08
LSM6-202ENST00000502781 MOBPQ13875 183 aa14.55□□□□□ -0.08
LSM6-202ENST00000502781 SSBP3-AS1Q7Z2R9 100 aa14.55□□□□□ -0.08
LSM6-202ENST00000502781 hADV29S1A0JD25 119 aa14.53□□□□□ -0.08
LSM6-202ENST00000502781 TSPAN13O95857 204 aa14.53□□□□□ -0.08
LSM6-202ENST00000502781 Q8NBF4 154 aa14.53□□□□□ -0.08
LSM6-202ENST00000502781 DEFB105AQ8NG35 78 aa14.52□□□□□ -0.08
LSM6-202ENST00000502781 SPAG11AQ6PDA7 123 aa14.51□□□□□ -0.09
LSM6-202ENST00000502781 K7ERJ3 54 aa14.5□□□□□ -0.09
LSM6-202ENST00000502781 Q1RN00 199 aa14.5□□□□□ -0.09
LSM6-202ENST00000502781 H0YGX0 51 aa14.49□□□□□ -0.09
LSM6-202ENST00000502781 SMIM29Q86T20 159 aa14.49□□□□□ -0.09
LSM6-202ENST00000502781 LAMTOR3Q9UHA4 124 aa14.49□□□□□ -0.09
LSM6-202ENST00000502781 Q8N377 158 aa14.48□□□□□ -0.09
LSM6-202ENST00000502781 Q6ZQY7 126 aa14.47□□□□□ -0.09
LSM6-202ENST00000502781 C9orf153Q5TBE3 101 aa14.47□□□□□ -0.09
LSM6-202ENST00000502781 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.46□□□□□ -0.1
LSM6-202ENST00000502781 TRIAP1O43715 76 aa14.45□□□□□ -0.1
LSM6-202ENST00000502781 TSTD3H0UI37 97 aa14.44□□□□□ -0.1
LSM6-202ENST00000502781 C4orf48Q5BLP8 95 aa14.44□□□□□ -0.1
LSM6-202ENST00000502781 FAM218AQ96MZ4 157 aa14.44□□□□□ -0.1
LSM6-202ENST00000502781 SPINK1P00995 79 aa14.42□□□□□ -0.1
LSM6-202ENST00000502781 M0R143 59 aa14.4□□□□□ -0.1
LSM6-202ENST00000502781 A0A1B0GX51 115 aa14.39□□□□□ -0.11
LSM6-202ENST00000502781 RPS29P62273 56 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms