RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 S100A7L2Q5SY68 101 aa13.41□□□□□ -0.26
CDKN2A-208ENST00000498124 C14orf144Q96I85 54 aa13.41□□□□□ -0.26
CDKN2A-208ENST00000498124 LINC00518Q8N0U6 118 aa13.4□□□□□ -0.26
CDKN2A-208ENST00000498124 KCNQ1DNQ9H478 68 aa13.4□□□□□ -0.26
CDKN2A-208ENST00000498124 UBE2AP49459 152 aa13.39□□□□□ -0.27
CDKN2A-208ENST00000498124 MUSTN1Q8IVN3 82 aa13.39□□□□□ -0.27
CDKN2A-208ENST00000498124 IGLV6-57P01721 117 aa13.38□□□□□ -0.27
CDKN2A-208ENST00000498124 SLC25A34Q6PIV7 304 aa13.38□□□□□ -0.27
CDKN2A-208ENST00000498124 CBY1Q9Y3M2 126 aa13.37□□□□□ -0.27
CDKN2A-208ENST00000498124 MUC2Q02817 5179 aa13.36□□□□□ -0.27
CDKN2A-208ENST00000498124 FAM19A1Q7Z5A9 133 aa13.36□□□□□ -0.27
CDKN2A-208ENST00000498124 KRTAP13-1Q8IUC0 172 aa13.34□□□□□ -0.27
CDKN2A-208ENST00000498124 OR13C6PQ8NH95 151 aa13.34□□□□□ -0.27
CDKN2A-208ENST00000498124 A0A087X002 238 aa13.33□□□□□ -0.28
CDKN2A-208ENST00000498124 SPRR1AP35321 89 aa13.33□□□□□ -0.28
CDKN2A-208ENST00000498124 LINC00337Q8N6G1 96 aa13.33□□□□□ -0.28
CDKN2A-208ENST00000498124 HIST1H4GQ99525 98 aa13.32□□□□□ -0.28
CDKN2A-208ENST00000498124 HIGD1BQ9P298 99 aa13.32□□□□□ -0.28
CDKN2A-208ENST00000498124 TRAV23DV6A0A075B6W5 121 aa13.31□□□□□ -0.28
CDKN2A-208ENST00000498124 ETDCA0A1B0GVM5 59 aa13.31□□□□□ -0.28
CDKN2A-208ENST00000498124 PRLHP81277 87 aa13.31□□□□□ -0.28
CDKN2A-208ENST00000498124 PRR4Q16378 134 aa13.31□□□□□ -0.28
CDKN2A-208ENST00000498124 KRTAP4-16G5E9R7 235 aaPredicted RBP13.28□□□□□ -0.28
CDKN2A-208ENST00000498124 C2orf91Q6ZV80 131 aa13.27□□□□□ -0.29
CDKN2A-208ENST00000498124 TRAV13-2A0A0B4J235 113 aa13.26□□□□□ -0.29
CDKN2A-208ENST00000498124 A4D1N5 150 aa13.26□□□□□ -0.29
CDKN2A-208ENST00000498124 ZNF73O43830 326 aaPredicted RBP13.26□□□□□ -0.29
CDKN2A-208ENST00000498124 A6NDN8 102 aa13.25□□□□□ -0.29
CDKN2A-208ENST00000498124 TSPAN13O95857 204 aa13.24□□□□□ -0.29
CDKN2A-208ENST00000498124 SMIM6P0DI80 62 aa13.24□□□□□ -0.29
CDKN2A-208ENST00000498124 HINT1P49773 126 aaPredicted RBP13.24□□□□□ -0.29
CDKN2A-208ENST00000498124 HIGD2AQ9BW72 106 aa13.24□□□□□ -0.29
CDKN2A-208ENST00000498124 B5MCH6 92 aa13.23□□□□□ -0.29
CDKN2A-208ENST00000498124 ANAPC11Q9NYG5 84 aa13.23□□□□□ -0.29
CDKN2A-208ENST00000498124 CRYGAP11844 174 aa13.22□□□□□ -0.29
CDKN2A-208ENST00000498124 TAL2Q16559 108 aa13.22□□□□□ -0.29
CDKN2A-208ENST00000498124 UQCR10Q9UDW1 63 aa13.22□□□□□ -0.29
CDKN2A-208ENST00000498124 KRTAP13-2Q52LG2 175 aa13.21□□□□□ -0.29
CDKN2A-208ENST00000498124 Q6ZRX8 168 aa13.2□□□□□ -0.3
CDKN2A-208ENST00000498124 TYMSOSQ8TAI1 123 aa13.2□□□□□ -0.3
CDKN2A-208ENST00000498124 LOC105371267A0A1B0GV96 52 aa13.19□□□□□ -0.3
CDKN2A-208ENST00000498124 C6orf99Q4VX62 202 aa13.17□□□□□ -0.3
CDKN2A-208ENST00000498124 CEND1Q8N111 149 aa13.16□□□□□ -0.3
CDKN2A-208ENST00000498124 SMCR5Q8TEV8 140 aa13.16□□□□□ -0.3
CDKN2A-208ENST00000498124 C12orf57Q99622 126 aa13.16□□□□□ -0.3
CDKN2A-208ENST00000498124 ZNF706Q9Y5V0 76 aaPredicted RBP13.15□□□□□ -0.3
CDKN2A-208ENST00000498124 HSD52Q0P140 79 aa13.14□□□□□ -0.31
CDKN2A-208ENST00000498124 FAM229BQ4G0N7 80 aa13.14□□□□□ -0.31
CDKN2A-208ENST00000498124 Q9BRP9 147 aa13.14□□□□□ -0.31
CDKN2A-208ENST00000498124 TRBV7-6A0A0J9YX20 115 aa13.13□□□□□ -0.31
CDKN2A-208ENST00000498124 TMEM238LA0A1B0GVL6 79 aa13.13□□□□□ -0.31
CDKN2A-208ENST00000498124 A6NJY4 79 aa13.13□□□□□ -0.31
CDKN2A-208ENST00000498124 COX7BP24311 80 aa13.13□□□□□ -0.31
CDKN2A-208ENST00000498124 ELOF1P60002 83 aaKnown RBP13.12□□□□□ -0.31
CDKN2A-208ENST00000498124 SMIM11BQ8TCY0 68 aa13.12□□□□□ -0.31
CDKN2A-208ENST00000498124 RAB37Q96AX2 223 aa13.11□□□□□ -0.31
CDKN2A-208ENST00000498124 MUC17Q685J3 4493 aa13.1□□□□□ -0.31
CDKN2A-208ENST00000498124 CFC1BP0CG36 223 aa13.1□□□□□ -0.31
CDKN2A-208ENST00000498124 CFC1P0CG37 223 aa13.1□□□□□ -0.31
CDKN2A-208ENST00000498124 SPRR4Q96PI1 79 aa13.1□□□□□ -0.31
CDKN2A-208ENST00000498124 PRO1933Q9H354 126 aa13.1□□□□□ -0.31
CDKN2A-208ENST00000498124 DHRS4-AS1Q9P1J3 65 aa13.1□□□□□ -0.31
CDKN2A-208ENST00000498124 A0A0B4J2C4 111 aa13.09□□□□□ -0.31
CDKN2A-208ENST00000498124 A0A1B0GWB2 263 aa13.09□□□□□ -0.31
CDKN2A-208ENST00000498124 ERC2-IT1O76042 136 aa13.08□□□□□ -0.32
CDKN2A-208ENST00000498124 FAT4Q6V0I7 4981 aa13.07□□□□□ -0.32
CDKN2A-208ENST00000498124 FXYD2P54710 66 aa13.07□□□□□ -0.32
CDKN2A-208ENST00000498124 LINC00304Q8N9R0 145 aa13.07□□□□□ -0.32
CDKN2A-208ENST00000498124 RETNLBQ9BQ08 111 aa13.07□□□□□ -0.32
CDKN2A-208ENST00000498124 VAMP3Q15836 100 aa13.06□□□□□ -0.32
CDKN2A-208ENST00000498124 H7C2G1 150 aa13.02□□□□□ -0.33
CDKN2A-208ENST00000498124 GAGE2AQ6NT46 116 aa13.02□□□□□ -0.33
CDKN2A-208ENST00000498124 LINC00483Q53H64 154 aa13.01□□□□□ -0.33
CDKN2A-208ENST00000498124 PRO1854Q9UHT4 67 aa13.01□□□□□ -0.33
CDKN2A-208ENST00000498124 TSTD3H0UI37 97 aa13□□□□□ -0.33
CDKN2A-208ENST00000498124 NHP2Q9NX24 153 aaKnown RBP13□□□□□ -0.33
CDKN2A-208ENST00000498124 C3orf22Q8N5N4 141 aa12.99□□□□□ -0.33
CDKN2A-208ENST00000498124 BVES-AS1Q5T3Y7 98 aa12.98□□□□□ -0.33
CDKN2A-208ENST00000498124 ST20-AS1Q8NBB2 130 aa12.98□□□□□ -0.33
CDKN2A-208ENST00000498124 SLC25A20O43772 301 aa12.97□□□□□ -0.33
CDKN2A-208ENST00000498124 Q1RN00 199 aa12.97□□□□□ -0.33
CDKN2A-208ENST00000498124 A0A0U1RQV1 116 aa12.95□□□□□ -0.34
CDKN2A-208ENST00000498124 TPRXLQ17RH7 258 aa12.95□□□□□ -0.34
CDKN2A-208ENST00000498124 CTAG1AP78358 180 aa12.94□□□□□ -0.34
CDKN2A-208ENST00000498124 LINC00575Q6W349 94 aa12.94□□□□□ -0.34
CDKN2A-208ENST00000498124 K7ERJ3 54 aa12.92□□□□□ -0.34
CDKN2A-208ENST00000498124 M0R143 59 aa12.92□□□□□ -0.34
CDKN2A-208ENST00000498124 IGLV7-46A0A075B6I9 117 aa12.91□□□□□ -0.34
CDKN2A-208ENST00000498124 SPRR1BP22528 89 aa12.91□□□□□ -0.34
CDKN2A-208ENST00000498124 LCE2AQ5TA79 106 aaPredicted RBP12.91□□□□□ -0.34
CDKN2A-208ENST00000498124 H0YGX0 51 aa12.9□□□□□ -0.34
CDKN2A-208ENST00000498124 hADV29S1A0JD25 119 aa12.89□□□□□ -0.35
CDKN2A-208ENST00000498124 DEFB105AQ8NG35 78 aa12.88□□□□□ -0.35
CDKN2A-208ENST00000498124 CDIP1Q9H305 208 aa12.88□□□□□ -0.35
CDKN2A-208ENST00000498124 TEX49A0A1B0GTD5 131 aa12.87□□□□□ -0.35
CDKN2A-208ENST00000498124 IGLV5-48A0A075B6I7 105 aa12.86□□□□□ -0.35
CDKN2A-208ENST00000498124 IGLV9-49A0A0B4J1Y8 123 aa12.86□□□□□ -0.35
CDKN2A-208ENST00000498124 SNCGO76070 127 aa12.86□□□□□ -0.35
CDKN2A-208ENST00000498124 LAMTOR3Q9UHA4 124 aa12.85□□□□□ -0.35
CDKN2A-208ENST00000498124 TRIAP1O43715 76 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms