RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 SPANXA2-OT1Q8N9U9 137 aa8.54□□□□□ -1.04
VEGFA-215ENST00000497139 SPRR4Q96PI1 79 aa8.54□□□□□ -1.04
VEGFA-215ENST00000497139 LINC00588Q9Y4M8 146 aa8.54□□□□□ -1.04
VEGFA-215ENST00000497139 GCN1Q92616 2671 aaKnown RBP8.54□□□□□ -1.04
VEGFA-215ENST00000497139 OXLD1Q5BKU9 147 aa8.53□□□□□ -1.04
VEGFA-215ENST00000497139 LELP1Q5T871 98 aa8.53□□□□□ -1.04
VEGFA-215ENST00000497139 Q8NBF4 154 aa8.53□□□□□ -1.04
VEGFA-215ENST00000497139 A0A1W2PNM2 257 aa8.52□□□□□ -1.05
VEGFA-215ENST00000497139 DSCR10P59022 87 aa8.52□□□□□ -1.05
VEGFA-215ENST00000497139 B9D2Q9BPU9 175 aa8.52□□□□□ -1.05
VEGFA-215ENST00000497139 RETNQ9HD89 108 aa8.52□□□□□ -1.05
VEGFA-215ENST00000497139 X6R8D5 127 aa8.52□□□□□ -1.05
VEGFA-215ENST00000497139 APCP25054 2843 aa8.52□□□□□ -1.05
VEGFA-215ENST00000497139 HCG22E2RYF7 251 aa8.52□□□□□ -1.05
VEGFA-215ENST00000497139 NDUFS5O43920 106 aa8.52□□□□□ -1.05
VEGFA-215ENST00000497139 Q9BRP9 147 aa8.52□□□□□ -1.05
VEGFA-215ENST00000497139 KCNQ1DNQ9H478 68 aa8.52□□□□□ -1.05
VEGFA-215ENST00000497139 DHRS4-AS1Q9P1J3 65 aa8.52□□□□□ -1.05
VEGFA-215ENST00000497139 ZANQ9Y493 2812 aa8.51□□□□□ -1.05
VEGFA-215ENST00000497139 MP68P56378 58 aa8.51□□□□□ -1.05
VEGFA-215ENST00000497139 TNP2Q05952 138 aa8.51□□□□□ -1.05
VEGFA-215ENST00000497139 HECTD1Q9ULT8 2610 aa8.51□□□□□ -1.05
VEGFA-215ENST00000497139 ATP11AUNQ6ZP68 121 aa8.51□□□□□ -1.05
VEGFA-215ENST00000497139 H3BPC8 53 aa8.5□□□□□ -1.05
VEGFA-215ENST00000497139 CAMK2N2Q96S95 79 aa8.5□□□□□ -1.05
VEGFA-215ENST00000497139 TLN2Q9Y4G6 2542 aa8.5□□□□□ -1.05
VEGFA-215ENST00000497139 C1orf137Q5JT78 98 aa8.5□□□□□ -1.05
VEGFA-215ENST00000497139 KRTAP1-3Q8IUG1 177 aa8.49□□□□□ -1.05
VEGFA-215ENST00000497139 J3QKU1 62 aa8.49□□□□□ -1.05
VEGFA-215ENST00000497139 ST20-AS1Q8NBB2 130 aa8.49□□□□□ -1.05
VEGFA-215ENST00000497139 K7EQZ3 153 aa8.48□□□□□ -1.05
VEGFA-215ENST00000497139 Q8N9P0 234 aaPredicted RBP8.48□□□□□ -1.05
VEGFA-215ENST00000497139 ITPR2Q14571 2701 aa8.48□□□□□ -1.05
VEGFA-215ENST00000497139 CHKB-CPT1BH3BT56 60 aa8.47□□□□□ -1.05
VEGFA-215ENST00000497139 NOTCH2Q04721 2471 aa8.47□□□□□ -1.05
VEGFA-215ENST00000497139 C16orf90A8MZG2 172 aa8.46□□□□□ -1.05
VEGFA-215ENST00000497139 Q75L30 129 aa8.46□□□□□ -1.05
VEGFA-215ENST00000497139 DEFB105AQ8NG35 78 aa8.46□□□□□ -1.05
VEGFA-215ENST00000497139 LINC00208Q96KT6 92 aa8.46□□□□□ -1.05
VEGFA-215ENST00000497139 RBM12B-AS1Q9P1G2 102 aa8.46□□□□□ -1.05
VEGFA-215ENST00000497139 PHF5AQ7RTV0 110 aaKnown RBP8.46□□□□□ -1.06
VEGFA-215ENST00000497139 PRR4Q16378 134 aa8.45□□□□□ -1.06
VEGFA-215ENST00000497139 UNC79Q9P2D8 2635 aa8.44□□□□□ -1.06
VEGFA-215ENST00000497139 LOC101927531A0A1B0GV80 90 aa8.43□□□□□ -1.06
VEGFA-215ENST00000497139 Q6ZRX8 168 aa8.43□□□□□ -1.06
VEGFA-215ENST00000497139 SONP18583 2426 aaKnown RBP8.43□□□□□ -1.06
VEGFA-215ENST00000497139 MXRA5Q9NR99 2828 aa8.43□□□□□ -1.06
VEGFA-215ENST00000497139 NKAPP1Q8N9T2 125 aa8.43□□□□□ -1.06
VEGFA-215ENST00000497139 ACANP16112 2415 aa8.43□□□□□ -1.06
VEGFA-215ENST00000497139 ITPR3Q14573 2671 aa8.42□□□□□ -1.06
VEGFA-215ENST00000497139 DNAJC9-AS1A6NH13 148 aa8.42□□□□□ -1.06
VEGFA-215ENST00000497139 PRR15LQ9BU68 103 aa8.42□□□□□ -1.06
VEGFA-215ENST00000497139 TEX15Q9BXT5 2789 aa8.41□□□□□ -1.06
VEGFA-215ENST00000497139 SETXQ7Z333 2677 aaKnown RBP8.41□□□□□ -1.06
VEGFA-215ENST00000497139 A8MU10 97 aa8.41□□□□□ -1.06
VEGFA-215ENST00000497139 FLNAP21333 2647 aaKnown RBP8.41□□□□□ -1.06
VEGFA-215ENST00000497139 A6NN06 94 aa8.4□□□□□ -1.06
VEGFA-215ENST00000497139 PLA2G2DQ9UNK4 145 aa8.4□□□□□ -1.06
VEGFA-215ENST00000497139 C7orf33Q8WU49 177 aa8.39□□□□□ -1.07
VEGFA-215ENST00000497139 ZNF469Q96JG9 3925 aaPredicted RBP8.39□□□□□ -1.07
VEGFA-215ENST00000497139 KRTAP4-16G5E9R7 235 aaPredicted RBP8.38□□□□□ -1.07
VEGFA-215ENST00000497139 KRTAP26-1Q6PEX3 210 aa8.38□□□□□ -1.07
VEGFA-215ENST00000497139 MYO9AB2RTY4 2548 aa8.38□□□□□ -1.07
VEGFA-215ENST00000497139 C15orf56Q8N910 161 aa8.38□□□□□ -1.07
VEGFA-215ENST00000497139 CDC42SE1Q9NRR8 79 aa8.38□□□□□ -1.07
VEGFA-215ENST00000497139 SPRR1AP35321 89 aa8.38□□□□□ -1.07
VEGFA-215ENST00000497139 IGKV2D-24A0A075B6R9 120 aa8.37□□□□□ -1.07
VEGFA-215ENST00000497139 LCA10Q71F78 164 aa8.37□□□□□ -1.07
VEGFA-215ENST00000497139 SPTSSBQ8NFR3 76 aa8.37□□□□□ -1.07
VEGFA-215ENST00000497139 PDZD2O15018 2839 aa8.36□□□□□ -1.07
VEGFA-215ENST00000497139 IGLV5-37A0A075B6J1 123 aa8.36□□□□□ -1.07
VEGFA-215ENST00000497139 A6NED7 52 aa8.36□□□□□ -1.07
VEGFA-215ENST00000497139 KRTAP29-1A8MX34 341 aaPredicted RBP8.35□□□□□ -1.07
VEGFA-215ENST00000497139 H0Y9P7 68 aa8.35□□□□□ -1.07
VEGFA-215ENST00000497139 C7orf65Q6ZTY9 151 aa8.35□□□□□ -1.07
VEGFA-215ENST00000497139 C9orf163Q8N9P6 203 aa8.35□□□□□ -1.07
VEGFA-215ENST00000497139 JMJD1CQ15652 2540 aa8.34□□□□□ -1.07
VEGFA-215ENST00000497139 AKAP9Q99996 3911 aa8.34□□□□□ -1.07
VEGFA-215ENST00000497139 SPART-AS1P0CW21 52 aa8.33□□□□□ -1.08
VEGFA-215ENST00000497139 KRTAP1-1Q07627 177 aa8.33□□□□□ -1.08
VEGFA-215ENST00000497139 MTORP42345 2549 aa8.33□□□□□ -1.08
VEGFA-215ENST00000497139 FLNBO75369 2602 aaKnown RBP8.33□□□□□ -1.08
VEGFA-215ENST00000497139 TLX1NBP0CAT3 122 aa8.33□□□□□ -1.08
VEGFA-215ENST00000497139 APOC4P55056 127 aa8.33□□□□□ -1.08
VEGFA-215ENST00000497139 IGLV1-50A0A075B6I6 118 aa8.32□□□□□ -1.08
VEGFA-215ENST00000497139 SERTAD4-AS1Q5TG53 156 aa8.32□□□□□ -1.08
VEGFA-215ENST00000497139 WFDC13Q8IUB5 93 aa8.32□□□□□ -1.08
VEGFA-215ENST00000497139 PRB2P02812 416 aaPredicted RBP8.32□□□□□ -1.08
VEGFA-215ENST00000497139 Q8NAQ8 132 aa8.31□□□□□ -1.08
VEGFA-215ENST00000497139 LINC00476Q8WZB0 136 aa8.31□□□□□ -1.08
VEGFA-215ENST00000497139 DEFB4AO15263 64 aa8.3□□□□□ -1.08
VEGFA-215ENST00000497139 DEFB135Q30KP9 77 aa8.3□□□□□ -1.08
VEGFA-215ENST00000497139 COA5Q86WW8 74 aa8.3□□□□□ -1.08
VEGFA-215ENST00000497139 IGLV7-46A0A075B6I9 117 aa8.3□□□□□ -1.08
VEGFA-215ENST00000497139 IGLV8-61A0A075B6I0 122 aa8.29□□□□□ -1.08
VEGFA-215ENST00000497139 CASC2Q6XLA1 102 aa8.29□□□□□ -1.08
VEGFA-215ENST00000497139 WFDC10BQ8IUB3 73 aa8.29□□□□□ -1.08
VEGFA-215ENST00000497139 LINC01558Q9Y6Z2 57 aa8.29□□□□□ -1.08
VEGFA-215ENST00000497139 H3BNG1 76 aa8.28□□□□□ -1.08
VEGFA-215ENST00000497139 HTN3P15516 51 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms