RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 PPDPFQ9H3Y8 114 aa13.88□□□□□ -0.19
CLIC3-203ENST00000494426 TRAV23DV6A0A075B6W5 121 aa13.87□□□□□ -0.19
CLIC3-203ENST00000494426 RPL13AP40429 203 aaKnown RBP13.87□□□□□ -0.19
CLIC3-203ENST00000494426 MUSTN1Q8IVN3 82 aa13.87□□□□□ -0.19
CLIC3-203ENST00000494426 HMCN2Q8NDA2 5059 aa13.87□□□□□ -0.19
CLIC3-203ENST00000494426 SMCR5Q8TEV8 140 aa13.86□□□□□ -0.19
CLIC3-203ENST00000494426 CRYGAP11844 174 aa13.85□□□□□ -0.19
CLIC3-203ENST00000494426 LINC00518Q8N0U6 118 aa13.84□□□□□ -0.19
CLIC3-203ENST00000494426 OR13C6PQ8NH95 151 aa13.84□□□□□ -0.19
CLIC3-203ENST00000494426 JOSD1Q15040 202 aaPredicted RBP13.83□□□□□ -0.2
CLIC3-203ENST00000494426 FAM229BQ4G0N7 80 aa13.83□□□□□ -0.2
CLIC3-203ENST00000494426 KRTAP13-2Q52LG2 175 aa13.83□□□□□ -0.2
CLIC3-203ENST00000494426 COPS9Q8WXC6 57 aa13.83□□□□□ -0.2
CLIC3-203ENST00000494426 ZNF73O43830 326 aaPredicted RBP13.82□□□□□ -0.2
CLIC3-203ENST00000494426 SPRR4Q96PI1 79 aa13.82□□□□□ -0.2
CLIC3-203ENST00000494426 Q9BRP9 147 aa13.82□□□□□ -0.2
CLIC3-203ENST00000494426 Q6ZRX8 168 aa13.81□□□□□ -0.2
CLIC3-203ENST00000494426 ERC2-IT1O76042 136 aa13.8□□□□□ -0.2
CLIC3-203ENST00000494426 COX8AP10176 69 aa13.8□□□□□ -0.2
CLIC3-203ENST00000494426 TMA7Q9Y2S6 64 aaKnown RBP13.8□□□□□ -0.2
CLIC3-203ENST00000494426 CBY1Q9Y3M2 126 aa13.78□□□□□ -0.2
CLIC3-203ENST00000494426 TYMSOSQ8TAI1 123 aa13.77□□□□□ -0.21
CLIC3-203ENST00000494426 PAM16Q9Y3D7 125 aa13.76□□□□□ -0.21
CLIC3-203ENST00000494426 DLEU1O43261 78 aa13.75□□□□□ -0.21
CLIC3-203ENST00000494426 SPATA45Q537H7 98 aa13.75□□□□□ -0.21
CLIC3-203ENST00000494426 ZNF706Q9Y5V0 76 aaPredicted RBP13.75□□□□□ -0.21
CLIC3-203ENST00000494426 C14orf144Q96I85 54 aa13.74□□□□□ -0.21
CLIC3-203ENST00000494426 VAMP8Q9BV40 100 aa13.73□□□□□ -0.21
CLIC3-203ENST00000494426 C3orf22Q8N5N4 141 aa13.72□□□□□ -0.21
CLIC3-203ENST00000494426 A6NDN8 102 aa13.71□□□□□ -0.21
CLIC3-203ENST00000494426 HINT1P49773 126 aaPredicted RBP13.71□□□□□ -0.21
CLIC3-203ENST00000494426 C6orf99Q4VX62 202 aa13.71□□□□□ -0.21
CLIC3-203ENST00000494426 PYY3Q5JQD4 70 aa13.71□□□□□ -0.21
CLIC3-203ENST00000494426 LINC00483Q53H64 154 aa13.7□□□□□ -0.22
CLIC3-203ENST00000494426 A4D1N5 150 aa13.69□□□□□ -0.22
CLIC3-203ENST00000494426 GAGE2AQ6NT46 116 aa13.68□□□□□ -0.22
CLIC3-203ENST00000494426 TRAV13-2A0A0B4J235 113 aa13.67□□□□□ -0.22
CLIC3-203ENST00000494426 ELOF1P60002 83 aaKnown RBP13.67□□□□□ -0.22
CLIC3-203ENST00000494426 COX7BP24311 80 aa13.66□□□□□ -0.22
CLIC3-203ENST00000494426 HIST1H4GQ99525 98 aa13.66□□□□□ -0.22
CLIC3-203ENST00000494426 ST20-AS1Q8NBB2 130 aa13.65□□□□□ -0.22
CLIC3-203ENST00000494426 SLC25A34Q6PIV7 304 aa13.64□□□□□ -0.23
CLIC3-203ENST00000494426 HIGD1BQ9P298 99 aa13.64□□□□□ -0.23
CLIC3-203ENST00000494426 TRBV7-6A0A0J9YX20 115 aa13.63□□□□□ -0.23
CLIC3-203ENST00000494426 TSPAN13O95857 204 aa13.63□□□□□ -0.23
CLIC3-203ENST00000494426 C2orf91Q6ZV80 131 aa13.63□□□□□ -0.23
CLIC3-203ENST00000494426 SMIM11BQ8TCY0 68 aa13.63□□□□□ -0.23
CLIC3-203ENST00000494426 DHRS4-AS1Q9P1J3 65 aa13.62□□□□□ -0.23
CLIC3-203ENST00000494426 LINC00304Q8N9R0 145 aa13.61□□□□□ -0.23
CLIC3-203ENST00000494426 A0A1B0GWB2 263 aa13.58□□□□□ -0.24
CLIC3-203ENST00000494426 C12orf57Q99622 126 aa13.58□□□□□ -0.24
CLIC3-203ENST00000494426 IGLV9-49A0A0B4J1Y8 123 aa13.54□□□□□ -0.24
CLIC3-203ENST00000494426 SPRR1BP22528 89 aa13.54□□□□□ -0.24
CLIC3-203ENST00000494426 Q8NBF4 154 aa13.54□□□□□ -0.24
CLIC3-203ENST00000494426 MOBPQ13875 183 aa13.52□□□□□ -0.25
CLIC3-203ENST00000494426 LRP2P98164 4655 aa13.51□□□□□ -0.25
CLIC3-203ENST00000494426 CFC1BP0CG36 223 aa13.51□□□□□ -0.25
CLIC3-203ENST00000494426 CFC1P0CG37 223 aa13.51□□□□□ -0.25
CLIC3-203ENST00000494426 TAL2Q16559 108 aa13.51□□□□□ -0.25
CLIC3-203ENST00000494426 CTAG1AP78358 180 aa13.49□□□□□ -0.25
CLIC3-203ENST00000494426 SPAG11AQ6PDA7 123 aa13.49□□□□□ -0.25
CLIC3-203ENST00000494426 SSBP3-AS1Q7Z2R9 100 aa13.49□□□□□ -0.25
CLIC3-203ENST00000494426 CEND1Q8N111 149 aa13.49□□□□□ -0.25
CLIC3-203ENST00000494426 PRR4Q16378 134 aa13.47□□□□□ -0.25
CLIC3-203ENST00000494426 LPAP08519 4548 aa13.46□□□□□ -0.25
CLIC3-203ENST00000494426 LINC01547P58512 204 aaPredicted RBP13.46□□□□□ -0.25
CLIC3-203ENST00000494426 DEFB105AQ8NG35 78 aa13.46□□□□□ -0.25
CLIC3-203ENST00000494426 VAMP3Q15836 100 aa13.45□□□□□ -0.26
CLIC3-203ENST00000494426 A0A0B4J2C4 111 aa13.44□□□□□ -0.26
CLIC3-203ENST00000494426 C4orf48Q5BLP8 95 aa13.44□□□□□ -0.26
CLIC3-203ENST00000494426 LINC00575Q6W349 94 aa13.44□□□□□ -0.26
CLIC3-203ENST00000494426 IGLV5-48A0A075B6I7 105 aa13.43□□□□□ -0.26
CLIC3-203ENST00000494426 TEX49A0A1B0GTD5 131 aa13.43□□□□□ -0.26
CLIC3-203ENST00000494426 FXYD2P54710 66 aa13.43□□□□□ -0.26
CLIC3-203ENST00000494426 C9orf153Q5TBE3 101 aa13.43□□□□□ -0.26
CLIC3-203ENST00000494426 RAB37Q96AX2 223 aa13.43□□□□□ -0.26
CLIC3-203ENST00000494426 RETNLBQ9BQ08 111 aa13.43□□□□□ -0.26
CLIC3-203ENST00000494426 NHP2Q9NX24 153 aaKnown RBP13.42□□□□□ -0.26
CLIC3-203ENST00000494426 H7C2G1 150 aa13.41□□□□□ -0.26
CLIC3-203ENST00000494426 SMIM29Q86T20 159 aa13.41□□□□□ -0.26
CLIC3-203ENST00000494426 LAMTOR3Q9UHA4 124 aa13.41□□□□□ -0.26
CLIC3-203ENST00000494426 UQCR10Q9UDW1 63 aa13.4□□□□□ -0.26
CLIC3-203ENST00000494426 SPINK1P00995 79 aa13.39□□□□□ -0.27
CLIC3-203ENST00000494426 SLC25A20O43772 301 aa13.38□□□□□ -0.27
CLIC3-203ENST00000494426 HSD52Q0P140 79 aa13.38□□□□□ -0.27
CLIC3-203ENST00000494426 Q1RN00 199 aa13.38□□□□□ -0.27
CLIC3-203ENST00000494426 Q8N377 158 aa13.38□□□□□ -0.27
CLIC3-203ENST00000494426 hADV29S1A0JD25 119 aa13.37□□□□□ -0.27
CLIC3-203ENST00000494426 BVES-AS1Q5T3Y7 98 aa13.37□□□□□ -0.27
CLIC3-203ENST00000494426 TMEM238LA0A1B0GVL6 79 aa13.36□□□□□ -0.27
CLIC3-203ENST00000494426 A6NJY4 79 aa13.36□□□□□ -0.27
CLIC3-203ENST00000494426 PRO1854Q9UHT4 67 aa13.35□□□□□ -0.27
CLIC3-203ENST00000494426 Q6ZQY7 126 aa13.33□□□□□ -0.28
CLIC3-203ENST00000494426 RPS29P62273 56 aaKnown RBP13.32□□□□□ -0.28
CLIC3-203ENST00000494426 PRO1933Q9H354 126 aa13.29□□□□□ -0.28
CLIC3-203ENST00000494426 H0YGX0 51 aa13.27□□□□□ -0.29
CLIC3-203ENST00000494426 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.27□□□□□ -0.29
CLIC3-203ENST00000494426 FAM218AQ96MZ4 157 aa13.27□□□□□ -0.29
CLIC3-203ENST00000494426 IGLV7-46A0A075B6I9 117 aa13.26□□□□□ -0.29
CLIC3-203ENST00000494426 K7ERJ3 54 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 440.3 ms