RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 C9orf129Q5T035 196 aaKnown RBP7.67□□□□□ -1.18
UPF3A-210ENST00000493727 MUSTN1Q8IVN3 82 aa7.67□□□□□ -1.18
UPF3A-210ENST00000493727 RPL37AP61513 92 aaKnown RBP7.66□□□□□ -1.18
UPF3A-210ENST00000493727 FAM19A5Q7Z5A7 132 aaPredicted RBP7.66□□□□□ -1.18
UPF3A-210ENST00000493727 SPACA4Q8TDM5 124 aa7.66□□□□□ -1.18
UPF3A-210ENST00000493727 RPL24P83731 157 aaKnown RBP7.65□□□□□ -1.18
UPF3A-210ENST00000493727 TAL2Q16559 108 aa7.65□□□□□ -1.18
UPF3A-210ENST00000493727 SOSTDC1Q6X4U4 206 aa7.65□□□□□ -1.18
UPF3A-210ENST00000493727 NKAPP1Q8N9T2 125 aa7.65□□□□□ -1.18
UPF3A-210ENST00000493727 FAM168BA1KXE4 195 aa7.64□□□□□ -1.19
UPF3A-210ENST00000493727 PANO1I0J062 215 aa7.64□□□□□ -1.19
UPF3A-210ENST00000493727 NCR3O14931 201 aa7.63□□□□□ -1.19
UPF3A-210ENST00000493727 DDTP30046 118 aa7.63□□□□□ -1.19
UPF3A-210ENST00000493727 CTAG1AP78358 180 aa7.63□□□□□ -1.19
UPF3A-210ENST00000493727 CEND1Q8N111 149 aa7.63□□□□□ -1.19
UPF3A-210ENST00000493727 LOC107984156A0A0G2JMH3 177 aa7.62□□□□□ -1.19
UPF3A-210ENST00000493727 A0A1W2PNN7 141 aa7.62□□□□□ -1.19
UPF3A-210ENST00000493727 PCP4L1A6NKN8 68 aa7.62□□□□□ -1.19
UPF3A-210ENST00000493727 ARL17AQ8IVW1 177 aa7.62□□□□□ -1.19
UPF3A-210ENST00000493727 PPDPFQ9H3Y8 114 aa7.62□□□□□ -1.19
UPF3A-210ENST00000493727 A0A087WYN8 130 aa7.61□□□□□ -1.19
UPF3A-210ENST00000493727 A4D1N5 150 aa7.61□□□□□ -1.19
UPF3A-210ENST00000493727 M0QXV9 152 aa7.61□□□□□ -1.19
UPF3A-210ENST00000493727 NDUFC2O95298 119 aa7.61□□□□□ -1.19
UPF3A-210ENST00000493727 VPREB1P12018 145 aa7.61□□□□□ -1.19
UPF3A-210ENST00000493727 M0R143 59 aa7.6□□□□□ -1.19
UPF3A-210ENST00000493727 Q8NDZ9 215 aa7.6□□□□□ -1.19
UPF3A-210ENST00000493727 C22orf24Q9Y442 160 aa7.6□□□□□ -1.19
UPF3A-210ENST00000493727 IGLV5-37A0A075B6J1 123 aa7.59□□□□□ -1.19
UPF3A-210ENST00000493727 GAGE10A6NGK3 116 aa7.59□□□□□ -1.19
UPF3A-210ENST00000493727 M0R378 163 aa7.59□□□□□ -1.19
UPF3A-210ENST00000493727 HINT1P49773 126 aaPredicted RBP7.59□□□□□ -1.19
UPF3A-210ENST00000493727 FXYD2P54710 66 aa7.59□□□□□ -1.19
UPF3A-210ENST00000493727 PRR3P79522 188 aaKnown RBP7.59□□□□□ -1.19
UPF3A-210ENST00000493727 LBHQ53QV2 105 aaPredicted RBP7.59□□□□□ -1.19
UPF3A-210ENST00000493727 PLAC8Q9NZF1 115 aa7.59□□□□□ -1.19
UPF3A-210ENST00000493727 UBE2BP63146 152 aa7.58□□□□□ -1.2
UPF3A-210ENST00000493727 S100A7L2Q5SY68 101 aa7.58□□□□□ -1.2
UPF3A-210ENST00000493727 MRPL55Q7Z7F7 128 aaKnown RBP7.58□□□□□ -1.2
UPF3A-210ENST00000493727 OR13C6PQ8NH95 151 aa7.58□□□□□ -1.2
UPF3A-210ENST00000493727 RAB37Q96AX2 223 aa7.58□□□□□ -1.2
UPF3A-210ENST00000493727 TRBV10-2A0A0K0K1G8 114 aa7.57□□□□□ -1.2
UPF3A-210ENST00000493727 BATFQ16520 125 aa7.57□□□□□ -1.2
UPF3A-210ENST00000493727 BVES-AS1Q5T3Y7 98 aa7.57□□□□□ -1.2
UPF3A-210ENST00000493727 PHF5AQ7RTV0 110 aaKnown RBP7.57□□□□□ -1.2
UPF3A-210ENST00000493727 NHP2Q9NX24 153 aaKnown RBP7.57□□□□□ -1.2
UPF3A-210ENST00000493727 IGKV2-28A0A075B6P5 120 aa7.56□□□□□ -1.2
UPF3A-210ENST00000493727 TRAV13-2A0A0B4J235 113 aa7.56□□□□□ -1.2
UPF3A-210ENST00000493727 A6NDN8 102 aa7.56□□□□□ -1.2
UPF3A-210ENST00000493727 IGKV2D-28P01615 120 aa7.56□□□□□ -1.2
UPF3A-210ENST00000493727 MT1HL1P0DM35 61 aa7.56□□□□□ -1.2
UPF3A-210ENST00000493727 KRTAP7-1Q8IUC3 87 aa7.56□□□□□ -1.2
UPF3A-210ENST00000493727 C7orf33Q8WU49 177 aa7.56□□□□□ -1.2
UPF3A-210ENST00000493727 LINC00167Q96N53 147 aa7.55□□□□□ -1.2
UPF3A-210ENST00000493727 A0A0B4J2C4 111 aa7.54□□□□□ -1.2
UPF3A-210ENST00000493727 TRBV10-3A0A0K0K1G6 114 aa7.54□□□□□ -1.2
UPF3A-210ENST00000493727 RPL37AP8A6NKH3 93 aa7.54□□□□□ -1.2
UPF3A-210ENST00000493727 CFC1BP0CG36 223 aa7.54□□□□□ -1.2
UPF3A-210ENST00000493727 CFC1P0CG37 223 aa7.54□□□□□ -1.2
UPF3A-210ENST00000493727 LINC00337Q8N6G1 96 aa7.54□□□□□ -1.2
UPF3A-210ENST00000493727 H7C2G1 150 aa7.53□□□□□ -1.2
UPF3A-210ENST00000493727 RPL13AP40429 203 aaKnown RBP7.53□□□□□ -1.2
UPF3A-210ENST00000493727 TMEM126AQ9H061 195 aa7.53□□□□□ -1.2
UPF3A-210ENST00000493727 CBY1Q9Y3M2 126 aa7.53□□□□□ -1.2
UPF3A-210ENST00000493727 K7ERJ3 54 aa7.52□□□□□ -1.21
UPF3A-210ENST00000493727 PRYO14603 147 aa7.52□□□□□ -1.21
UPF3A-210ENST00000493727 Q1RN00 199 aa7.52□□□□□ -1.21
UPF3A-210ENST00000493727 IGLV6-57P01721 117 aa7.51□□□□□ -1.21
UPF3A-210ENST00000493727 IGLV1-50A0A075B6I6 118 aa7.5□□□□□ -1.21
UPF3A-210ENST00000493727 TRAV23DV6A0A075B6W5 121 aa7.5□□□□□ -1.21
UPF3A-210ENST00000493727 PRO1854Q9UHT4 67 aa7.5□□□□□ -1.21
UPF3A-210ENST00000493727 A0A1B0GWB2 263 aa7.49□□□□□ -1.21
UPF3A-210ENST00000493727 REG3GQ6UW15 175 aa7.48□□□□□ -1.21
UPF3A-210ENST00000493727 DIRC1Q969H9 104 aa7.47□□□□□ -1.21
UPF3A-210ENST00000493727 SNHG12Q9BXW3 62 aa7.47□□□□□ -1.21
UPF3A-210ENST00000493727 KCNQ1DNQ9H478 68 aa7.47□□□□□ -1.21
UPF3A-210ENST00000493727 ETDCA0A1B0GVM5 59 aa7.46□□□□□ -1.22
UPF3A-210ENST00000493727 ZNF73O43830 326 aaPredicted RBP7.46□□□□□ -1.22
UPF3A-210ENST00000493727 C1orf137Q5JT78 98 aa7.46□□□□□ -1.22
UPF3A-210ENST00000493727 KRTAP11-1Q8IUC1 163 aa7.46□□□□□ -1.22
UPF3A-210ENST00000493727 SMIM11BQ8TCY0 68 aa7.46□□□□□ -1.22
UPF3A-210ENST00000493727 PSORS1C2Q9UIG4 136 aa7.46□□□□□ -1.22
UPF3A-210ENST00000493727 PSMB2P49721 201 aa7.45□□□□□ -1.22
UPF3A-210ENST00000493727 C6orf99Q4VX62 202 aa7.45□□□□□ -1.22
UPF3A-210ENST00000493727 TSPAN13O95857 204 aa7.44□□□□□ -1.22
UPF3A-210ENST00000493727 UBE2AP49459 152 aa7.44□□□□□ -1.22
UPF3A-210ENST00000493727 FAM19A1Q7Z5A9 133 aa7.44□□□□□ -1.22
UPF3A-210ENST00000493727 BCE1O60756 84 aa7.43□□□□□ -1.22
UPF3A-210ENST00000493727 RPL28P46779 137 aaKnown RBP7.43□□□□□ -1.22
UPF3A-210ENST00000493727 VAMP3Q15836 100 aa7.43□□□□□ -1.22
UPF3A-210ENST00000493727 COL5A1-AS1Q5SY13 56 aa7.43□□□□□ -1.22
UPF3A-210ENST00000493727 COX7BP24311 80 aa7.42□□□□□ -1.22
UPF3A-210ENST00000493727 LINC01600Q96MT4 127 aa7.42□□□□□ -1.22
UPF3A-210ENST00000493727 COX6CP09669 75 aa7.41□□□□□ -1.22
UPF3A-210ENST00000493727 SPRR1AP35321 89 aa7.41□□□□□ -1.22
UPF3A-210ENST00000493727 SPINK6Q6UWN8 80 aa7.41□□□□□ -1.22
UPF3A-210ENST00000493727 SCGB1C2P0DMR2 95 aa7.4□□□□□ -1.22
UPF3A-210ENST00000493727 PRLHP81277 87 aa7.4□□□□□ -1.22
UPF3A-210ENST00000493727 NAA38Q9BRA0 125 aaKnown RBP7.4□□□□□ -1.22
UPF3A-210ENST00000493727 LPAP08519 4548 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms