RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 ARPC5O15511 151 aa1.4□□□□□ -2.19
UBR4-215ENST00000492606 ZNF73O43830 326 aaPredicted RBP1.4□□□□□ -2.19
UBR4-215ENST00000492606 MPC2O95563 127 aa1.4□□□□□ -2.19
UBR4-215ENST00000492606 PMP2P02689 132 aa1.4□□□□□ -2.19
UBR4-215ENST00000492606 MT-ND4LP03901 98 aa1.4□□□□□ -2.19
UBR4-215ENST00000492606 CD3DP04234 171 aa1.4□□□□□ -2.19
UBR4-215ENST00000492606 S100A6P06703 90 aa1.4□□□□□ -2.19
UBR4-215ENST00000492606 SLC25A6P12236 298 aa1.4□□□□□ -2.19
UBR4-215ENST00000492606 TAS2R30P59541 319 aa1.4□□□□□ -2.19
UBR4-215ENST00000492606 RAB5BP61020 215 aa1.4□□□□□ -2.19
UBR4-215ENST00000492606 SERF2P84101 59 aa1.4□□□□□ -2.19
UBR4-215ENST00000492606 AKR1C1Q04828 323 aa1.4□□□□□ -2.19
UBR4-215ENST00000492606 RHEBQ15382 184 aa1.4□□□□□ -2.19
UBR4-215ENST00000492606 Q5BKY6 102 aa1.4□□□□□ -2.19
UBR4-215ENST00000492606 SAPCD1Q5SSQ6 148 aa1.4□□□□□ -2.19
UBR4-215ENST00000492606 HRCT1Q6UXD1 115 aa1.4□□□□□ -2.19
UBR4-215ENST00000492606 PPP1R1CQ8WVI7 109 aa1.4□□□□□ -2.19
UBR4-215ENST00000492606 MAP1LC3AQ9H492 121 aa1.4□□□□□ -2.19
UBR4-215ENST00000492606 TMEM242Q9NWH2 141 aa1.4□□□□□ -2.19
UBR4-215ENST00000492606 ANAPC10Q9UM13 185 aa1.4□□□□□ -2.19
UBR4-215ENST00000492606 C1orf196B1AJZ1 125 aa1.39□□□□□ -2.19
UBR4-215ENST00000492606 F8W036 122 aa1.39□□□□□ -2.19
UBR4-215ENST00000492606 COX7A2LO14548 114 aa1.39□□□□□ -2.19
UBR4-215ENST00000492606 UBE2L6O14933 153 aa1.39□□□□□ -2.19
UBR4-215ENST00000492606 SFT2D2O95562 160 aa1.39□□□□□ -2.19
UBR4-215ENST00000492606 APOC3P02656 99 aa1.39□□□□□ -2.19
UBR4-215ENST00000492606 IAPPP10997 89 aa1.39□□□□□ -2.19
UBR4-215ENST00000492606 S100PP25815 95 aa1.39□□□□□ -2.19
UBR4-215ENST00000492606 RPL12P30050 165 aaKnown RBP1.39□□□□□ -2.19
UBR4-215ENST00000492606 RAB4BP61018 213 aa1.39□□□□□ -2.19
UBR4-215ENST00000492606 SLC38A11Q08AI6 406 aa1.39□□□□□ -2.19
UBR4-215ENST00000492606 JOSD1Q15040 202 aaPredicted RBP1.39□□□□□ -2.19
UBR4-215ENST00000492606 SCGB2B2Q4G0G5 96 aa1.39□□□□□ -2.19
UBR4-215ENST00000492606 C5orf38Q86SI9 138 aa1.39□□□□□ -2.19
UBR4-215ENST00000492606 OR5C1Q8NGR4 320 aa1.39□□□□□ -2.19
UBR4-215ENST00000492606 LIMD2Q9BT23 127 aa1.39□□□□□ -2.19
UBR4-215ENST00000492606 NKX6-2Q9C056 277 aaPredicted RBP1.39□□□□□ -2.19
UBR4-215ENST00000492606 LENEPQ9Y5L5 61 aa1.39□□□□□ -2.19
UBR4-215ENST00000492606 IFNA1P01562 189 aa1.38□□□□□ -2.19
UBR4-215ENST00000492606 MT1EP04732 61 aa1.38□□□□□ -2.19
UBR4-215ENST00000492606 SMIM6P0DI80 62 aa1.38□□□□□ -2.19
UBR4-215ENST00000492606 PYYP10082 97 aa1.38□□□□□ -2.19
UBR4-215ENST00000492606 FGF7P21781 194 aa1.38□□□□□ -2.19
UBR4-215ENST00000492606 AKR1D1P51857 326 aa1.38□□□□□ -2.19
UBR4-215ENST00000492606 FOXA3P55318 350 aaPredicted RBP1.38□□□□□ -2.19
UBR4-215ENST00000492606 IAH1Q2TAA2 248 aaPredicted RBP1.38□□□□□ -2.19
UBR4-215ENST00000492606 KHDC3LQ587J8 217 aa1.38□□□□□ -2.19
UBR4-215ENST00000492606 RASL11AQ6T310 242 aa1.38□□□□□ -2.19
UBR4-215ENST00000492606 ALKAL2Q6UX46 152 aa1.38□□□□□ -2.19
UBR4-215ENST00000492606 STX12Q86Y82 276 aa1.38□□□□□ -2.19
UBR4-215ENST00000492606 MT1MQ8N339 61 aa1.38□□□□□ -2.19
UBR4-215ENST00000492606 CIB3Q96Q77 187 aaPredicted RBP1.38□□□□□ -2.19
UBR4-215ENST00000492606 GGACTQ9BVM4 153 aa1.38□□□□□ -2.19
UBR4-215ENST00000492606 EIF5A2Q9GZV4 153 aaKnown RBP1.38□□□□□ -2.19
UBR4-215ENST00000492606 TMEM126AQ9H061 195 aa1.38□□□□□ -2.19
UBR4-215ENST00000492606 TIMM9Q9Y5J7 89 aa1.38□□□□□ -2.19
UBR4-215ENST00000492606 TRAV9-1A0A075B6T8 112 aa1.37□□□□□ -2.19
UBR4-215ENST00000492606 C3orf85A0A1B0GTC6 90 aa1.37□□□□□ -2.19
UBR4-215ENST00000492606 C17orf112F2Z3M2 114 aa1.37□□□□□ -2.19
UBR4-215ENST00000492606 H3BVH4 76 aa1.37□□□□□ -2.19
UBR4-215ENST00000492606 PDE6DO43924 150 aa1.37□□□□□ -2.19
UBR4-215ENST00000492606 ERC2-IT1O76042 136 aa1.37□□□□□ -2.19
UBR4-215ENST00000492606 MT1GP13640 62 aa1.37□□□□□ -2.19
UBR4-215ENST00000492606 SULT1A1P50225 295 aa1.37□□□□□ -2.19
UBR4-215ENST00000492606 KRTAP19-7Q3SYF9 63 aa1.37□□□□□ -2.19
UBR4-215ENST00000492606 AKR1C8PQ5T2L2 129 aa1.37□□□□□ -2.19
UBR4-215ENST00000492606 C2orf91Q6ZV80 131 aa1.37□□□□□ -2.19
UBR4-215ENST00000492606 S100A7AQ86SG5 101 aa1.37□□□□□ -2.19
UBR4-215ENST00000492606 MBD3L1Q8WWY6 194 aa1.37□□□□□ -2.19
UBR4-215ENST00000492606 PSMG3Q9BT73 122 aaPredicted RBP1.37□□□□□ -2.19
UBR4-215ENST00000492606 LYRM2Q9NU23 88 aaPredicted RBP1.37□□□□□ -2.19
UBR4-215ENST00000492606 GSKIPQ9P0R6 139 aa1.37□□□□□ -2.19
UBR4-215ENST00000492606 ARL2-SNX15V9GYD0 113 aa1.37□□□□□ -2.19
UBR4-215ENST00000492606 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.36□□□□□ -2.19
UBR4-215ENST00000492606 IGKV2-29A2NJV5 120 aaPredicted RBP1.36□□□□□ -2.19
UBR4-215ENST00000492606 C7orf77A4D0Y5 90 aa1.36□□□□□ -2.19
UBR4-215ENST00000492606 TSTD3H0UI37 97 aa1.36□□□□□ -2.19
UBR4-215ENST00000492606 H0YAA0 97 aa1.36□□□□□ -2.19
UBR4-215ENST00000492606 M0R378 163 aa1.36□□□□□ -2.19
UBR4-215ENST00000492606 SIX6O95475 246 aa1.36□□□□□ -2.19
UBR4-215ENST00000492606 PDE6HQ13956 83 aa1.36□□□□□ -2.19
UBR4-215ENST00000492606 ZNF56Q15929 161 aa1.36□□□□□ -2.19
UBR4-215ENST00000492606 SFT2D1Q8WV19 159 aa1.36□□□□□ -2.19
UBR4-215ENST00000492606 C12orf57Q99622 126 aa1.36□□□□□ -2.19
UBR4-215ENST00000492606 MANBALQ9NQG1 85 aa1.36□□□□□ -2.19
UBR4-215ENST00000492606 MUC21A0A140T8X8 626 aa1.35□□□□□ -2.19
UBR4-215ENST00000492606 ZNF727A8MUV8 499 aa1.35□□□□□ -2.19
UBR4-215ENST00000492606 ARMS2P0C7Q2 107 aa1.35□□□□□ -2.19
UBR4-215ENST00000492606 METTL15P1P0C7V9 234 aa1.35□□□□□ -2.19
UBR4-215ENST00000492606 S100A4P26447 101 aaKnown RBP1.35□□□□□ -2.19
UBR4-215ENST00000492606 RANP62826 216 aaKnown RBP1.35□□□□□ -2.19
UBR4-215ENST00000492606 C10orf113Q5VZT2 155 aa1.35□□□□□ -2.19
UBR4-215ENST00000492606 RPL7L1Q6DKI1 246 aaKnown RBP1.35□□□□□ -2.19
UBR4-215ENST00000492606 C2orf82Q6UX34 121 aa1.35□□□□□ -2.19
UBR4-215ENST00000492606 PFDN5Q99471 154 aa1.35□□□□□ -2.19
UBR4-215ENST00000492606 MGST2Q99735 147 aa1.35□□□□□ -2.19
UBR4-215ENST00000492606 NAT8Q9UHE5 227 aa1.35□□□□□ -2.19
UBR4-215ENST00000492606 LSM5Q9Y4Y9 91 aaKnown RBP1.35□□□□□ -2.19
UBR4-215ENST00000492606 CTXND1A0A1B0GTU2 59 aa1.34□□□□□ -2.19
UBR4-215ENST00000492606 MAP1LC3B2A6NCE7 125 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms