RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 A0A0G2JQZ4 141 aa6.79□□□□□ -1.32
EXOSC3-207ENST00000490516 Q1RN00 199 aa6.79□□□□□ -1.32
EXOSC3-207ENST00000490516 PRO1933Q9H354 126 aa6.79□□□□□ -1.32
EXOSC3-207ENST00000490516 LINC01546A6NGU7 62 aa6.78□□□□□ -1.32
EXOSC3-207ENST00000490516 TRAV23DV6A0A075B6W5 121 aa6.77□□□□□ -1.33
EXOSC3-207ENST00000490516 TRBV10-2A0A0K0K1G8 114 aa6.77□□□□□ -1.33
EXOSC3-207ENST00000490516 OBSCN-AS1Q96MR7 158 aa6.77□□□□□ -1.33
EXOSC3-207ENST00000490516 ZNF73O43830 326 aaPredicted RBP6.76□□□□□ -1.33
EXOSC3-207ENST00000490516 C10orf91Q5T1B1 145 aa6.76□□□□□ -1.33
EXOSC3-207ENST00000490516 FA2HQ7L5A8 372 aa6.76□□□□□ -1.33
EXOSC3-207ENST00000490516 FAM236DA0A1B0GTK5 79 aa6.75□□□□□ -1.33
EXOSC3-207ENST00000490516 FAM236CP0DP71 79 aa6.75□□□□□ -1.33
EXOSC3-207ENST00000490516 S100A7L2Q5SY68 101 aa6.75□□□□□ -1.33
EXOSC3-207ENST00000490516 PCP2Q8IVA1 136 aa6.75□□□□□ -1.33
EXOSC3-207ENST00000490516 TCTE3Q8IZS6 198 aa6.74□□□□□ -1.33
EXOSC3-207ENST00000490516 AKR1D1P51857 326 aa6.73□□□□□ -1.33
EXOSC3-207ENST00000490516 SPANXB1Q9NS25 103 aaPredicted RBP6.73□□□□□ -1.33
EXOSC3-207ENST00000490516 TMEM223A0PJW6 202 aa6.72□□□□□ -1.33
EXOSC3-207ENST00000490516 LOC107984156A0A0G2JMH3 177 aa6.71□□□□□ -1.34
EXOSC3-207ENST00000490516 ARL17AQ8IVW1 177 aa6.71□□□□□ -1.34
EXOSC3-207ENST00000490516 DEFB105AQ8NG35 78 aa6.71□□□□□ -1.34
EXOSC3-207ENST00000490516 A0A096LNJ9 63 aa6.7□□□□□ -1.34
EXOSC3-207ENST00000490516 HERV-K104P63124 156 aa6.7□□□□□ -1.34
EXOSC3-207ENST00000490516 BAGE3Q86Y29 109 aa6.7□□□□□ -1.34
EXOSC3-207ENST00000490516 TMEM238LA0A1B0GVL6 79 aa6.69□□□□□ -1.34
EXOSC3-207ENST00000490516 TCL1BO95988 128 aa6.69□□□□□ -1.34
EXOSC3-207ENST00000490516 PEA15Q15121 130 aa6.69□□□□□ -1.34
EXOSC3-207ENST00000490516 C6orf99Q4VX62 202 aa6.69□□□□□ -1.34
EXOSC3-207ENST00000490516 MAP1LC3CQ9BXW4 147 aa6.69□□□□□ -1.34
EXOSC3-207ENST00000490516 HINT1P49773 126 aaPredicted RBP6.68□□□□□ -1.34
EXOSC3-207ENST00000490516 TAL2Q16559 108 aa6.68□□□□□ -1.34
EXOSC3-207ENST00000490516 SMCO4Q9NRQ5 59 aa6.68□□□□□ -1.34
EXOSC3-207ENST00000490516 LINC00587B1AMM8 73 aa6.67□□□□□ -1.34
EXOSC3-207ENST00000490516 DHRS4-AS1Q9P1J3 65 aa6.67□□□□□ -1.34
EXOSC3-207ENST00000490516 KRTAP2-3P0C7H8 128 aa6.66□□□□□ -1.34
EXOSC3-207ENST00000490516 Q96NJ1 140 aa6.66□□□□□ -1.34
EXOSC3-207ENST00000490516 KRTAP2-4Q9BYR9 128 aa6.66□□□□□ -1.34
EXOSC3-207ENST00000490516 TEX49A0A1B0GTD5 131 aa6.64□□□□□ -1.35
EXOSC3-207ENST00000490516 NDUFC2O95298 119 aa6.64□□□□□ -1.35
EXOSC3-207ENST00000490516 HBDP02042 147 aa6.64□□□□□ -1.35
EXOSC3-207ENST00000490516 ANAPC16Q96DE5 110 aa6.64□□□□□ -1.35
EXOSC3-207ENST00000490516 MDN1Q9NU22 5596 aa6.63□□□□□ -1.35
EXOSC3-207ENST00000490516 MYMXA0A1B0GTQ4 84 aa6.63□□□□□ -1.35
EXOSC3-207ENST00000490516 EIF4EBP3O60516 100 aaPredicted RBP6.63□□□□□ -1.35
EXOSC3-207ENST00000490516 MT-ND4LP03901 98 aa6.63□□□□□ -1.35
EXOSC3-207ENST00000490516 PMCHL1Q16048 86 aa6.63□□□□□ -1.35
EXOSC3-207ENST00000490516 Q8N9P0 234 aaPredicted RBP6.63□□□□□ -1.35
EXOSC3-207ENST00000490516 MIEN1Q9BRT3 115 aa6.63□□□□□ -1.35
EXOSC3-207ENST00000490516 KMT2DO14686 5537 aa6.62□□□□□ -1.35
EXOSC3-207ENST00000490516 MPLKIPQ8TAP9 179 aa6.61□□□□□ -1.35
EXOSC3-207ENST00000490516 NPC2P61916 151 aa6.6□□□□□ -1.35
EXOSC3-207ENST00000490516 IGFL1Q6UW32 110 aa6.6□□□□□ -1.35
EXOSC3-207ENST00000490516 COMMD7Q86VX2 200 aa6.6□□□□□ -1.35
EXOSC3-207ENST00000490516 RPS10P5Q9NQ39 176 aa6.6□□□□□ -1.35
EXOSC3-207ENST00000490516 RBM12B-AS1Q9P1G2 102 aa6.6□□□□□ -1.35
EXOSC3-207ENST00000490516 A8MUU9 505 aa6.59□□□□□ -1.35
EXOSC3-207ENST00000490516 KRTAP5-9P26371 169 aa6.59□□□□□ -1.35
EXOSC3-207ENST00000490516 TSPEAR-AS2P59090 65 aa6.59□□□□□ -1.35
EXOSC3-207ENST00000490516 SOSTDC1Q6X4U4 206 aa6.59□□□□□ -1.35
EXOSC3-207ENST00000490516 URB1-AS1Q96HZ7 61 aa6.59□□□□□ -1.35
EXOSC3-207ENST00000490516 KRTAP16-1A8MUX0 517 aa6.58□□□□□ -1.36
EXOSC3-207ENST00000490516 HRES1P13985 223 aa6.58□□□□□ -1.36
EXOSC3-207ENST00000490516 ELOF1P60002 83 aaKnown RBP6.57□□□□□ -1.36
EXOSC3-207ENST00000490516 COX7BP24311 80 aa6.56□□□□□ -1.36
EXOSC3-207ENST00000490516 Q6ZVH6 145 aa6.56□□□□□ -1.36
EXOSC3-207ENST00000490516 CBY1Q9Y3M2 126 aa6.56□□□□□ -1.36
EXOSC3-207ENST00000490516 OR13C6PQ8NH95 151 aa6.55□□□□□ -1.36
EXOSC3-207ENST00000490516 IGLV5-48A0A075B6I7 105 aa6.53□□□□□ -1.36
EXOSC3-207ENST00000490516 LINC00614P0C842 121 aa6.53□□□□□ -1.36
EXOSC3-207ENST00000490516 RHEBQ15382 184 aa6.53□□□□□ -1.36
EXOSC3-207ENST00000490516 TRAV12-1A0A0B4J245 112 aa6.52□□□□□ -1.37
EXOSC3-207ENST00000490516 FABP9Q0Z7S8 132 aa6.51□□□□□ -1.37
EXOSC3-207ENST00000490516 ADAMTSL4-AS1Q5T5F5 129 aa6.51□□□□□ -1.37
EXOSC3-207ENST00000490516 TRBV7-7A0A0K0K1E9 115 aa6.5□□□□□ -1.37
EXOSC3-207ENST00000490516 A6NN06 94 aa6.5□□□□□ -1.37
EXOSC3-207ENST00000490516 A8MWP4 228 aa6.5□□□□□ -1.37
EXOSC3-207ENST00000490516 LEPROTO15243 131 aa6.5□□□□□ -1.37
EXOSC3-207ENST00000490516 IFITM2Q01629 132 aa6.5□□□□□ -1.37
EXOSC3-207ENST00000490516 C18orf32Q8TCD1 76 aa6.49□□□□□ -1.37
EXOSC3-207ENST00000490516 NOTCH2NLQ7Z3S9 236 aa6.48□□□□□ -1.37
EXOSC3-207ENST00000490516 J3QQQ9 107 aa6.47□□□□□ -1.37
EXOSC3-207ENST00000490516 IFI27L1Q96BM0 104 aa6.47□□□□□ -1.37
EXOSC3-207ENST00000490516 SEC11CQ9BY50 192 aa6.46□□□□□ -1.38
EXOSC3-207ENST00000490516 SPANXDQ9BXN6 97 aa6.45□□□□□ -1.38
EXOSC3-207ENST00000490516 SPANXCQ9NY87 97 aa6.44□□□□□ -1.38
EXOSC3-207ENST00000490516 LST1O00453 97 aa6.43□□□□□ -1.38
EXOSC3-207ENST00000490516 NMUP48645 174 aa6.43□□□□□ -1.38
EXOSC3-207ENST00000490516 A0A0J9YXY3 114 aa6.42□□□□□ -1.38
EXOSC3-207ENST00000490516 F8WEM9 126 aa6.42□□□□□ -1.38
EXOSC3-207ENST00000490516 DSCR10P59022 87 aa6.41□□□□□ -1.38
EXOSC3-207ENST00000490516 COX19Q49B96 90 aa6.41□□□□□ -1.38
EXOSC3-207ENST00000490516 LINC00308Q8TCZ7 52 aa6.41□□□□□ -1.38
EXOSC3-207ENST00000490516 CLEC2BQ92478 149 aa6.41□□□□□ -1.38
EXOSC3-207ENST00000490516 KRTAP2-2Q9BYT5 123 aa6.41□□□□□ -1.38
EXOSC3-207ENST00000490516 KRTAP2-1Q9BYU5 128 aa6.41□□□□□ -1.38
EXOSC3-207ENST00000490516 TRBV7-6A0A0J9YX20 115 aa6.4□□□□□ -1.38
EXOSC3-207ENST00000490516 H0Y8G0 127 aa6.4□□□□□ -1.38
EXOSC3-207ENST00000490516 LINC00518Q8N0U6 118 aa6.4□□□□□ -1.38
EXOSC3-207ENST00000490516 MTURNQ8N3F0 131 aa6.4□□□□□ -1.38
EXOSC3-207ENST00000490516 A0A1B0GWB2 263 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms