RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 DIRC1Q969H9 104 aa13.13□□□□□ -0.31
SND1-214ENST00000489417 K7EP34 96 aa13.11□□□□□ -0.31
SND1-214ENST00000489417 FAM30AQ9NZY2 134 aa13.11□□□□□ -0.31
SND1-214ENST00000489417 H0YGX0 51 aa13.1□□□□□ -0.31
SND1-214ENST00000489417 TCL1BO95988 128 aa13.1□□□□□ -0.31
SND1-214ENST00000489417 Q6ZSA8 131 aa13.1□□□□□ -0.31
SND1-214ENST00000489417 CLEC2BQ92478 149 aa13.1□□□□□ -0.31
SND1-214ENST00000489417 TRBV20-1A0A075B6N2 111 aa13.09□□□□□ -0.31
SND1-214ENST00000489417 UBE2BP63146 152 aa13.09□□□□□ -0.31
SND1-214ENST00000489417 GTF2H5Q6ZYL4 71 aa13.08□□□□□ -0.32
SND1-214ENST00000489417 TRBV7-6A0A0J9YX20 115 aa13.06□□□□□ -0.32
SND1-214ENST00000489417 COX7BP24311 80 aa13.05□□□□□ -0.32
SND1-214ENST00000489417 SPRR1AP35321 89 aa13.05□□□□□ -0.32
SND1-214ENST00000489417 ATXN8Q156A1 80 aa13.05□□□□□ -0.32
SND1-214ENST00000489417 REG3GQ6UW15 175 aa13.05□□□□□ -0.32
SND1-214ENST00000489417 DNAH8Q96JB1 4490 aa13.05□□□□□ -0.32
SND1-214ENST00000489417 LST1O00453 97 aa13.05□□□□□ -0.32
SND1-214ENST00000489417 KRTAP11-1Q8IUC1 163 aa13.05□□□□□ -0.32
SND1-214ENST00000489417 FAM218AQ96MZ4 157 aa13.05□□□□□ -0.32
SND1-214ENST00000489417 ELOF1P60002 83 aaKnown RBP13.04□□□□□ -0.32
SND1-214ENST00000489417 CIRBP-AS1Q8TBR5 109 aa13.04□□□□□ -0.32
SND1-214ENST00000489417 ETDCA0A1B0GVM5 59 aa13.02□□□□□ -0.33
SND1-214ENST00000489417 KRTAP4-16G5E9R7 235 aaPredicted RBP13.02□□□□□ -0.33
SND1-214ENST00000489417 H3BMG7 143 aa13.02□□□□□ -0.33
SND1-214ENST00000489417 UBE2V1Q13404 147 aa13.02□□□□□ -0.33
SND1-214ENST00000489417 SCXQ7RTU7 201 aa13.02□□□□□ -0.33
SND1-214ENST00000489417 LINC00575Q6W349 94 aa13□□□□□ -0.33
SND1-214ENST00000489417 LINC00528Q8N1L1 170 aa12.99□□□□□ -0.33
SND1-214ENST00000489417 B5MCH6 92 aa12.98□□□□□ -0.33
SND1-214ENST00000489417 TRACP01848 142 aa12.98□□□□□ -0.33
SND1-214ENST00000489417 A0A1B0GX51 115 aa12.97□□□□□ -0.33
SND1-214ENST00000489417 HAMPP81172 84 aa12.96□□□□□ -0.33
SND1-214ENST00000489417 Q6ZRX8 168 aa12.96□□□□□ -0.33
SND1-214ENST00000489417 SLC25A20O43772 301 aa12.96□□□□□ -0.34
SND1-214ENST00000489417 SNCGO76070 127 aa12.96□□□□□ -0.34
SND1-214ENST00000489417 LCE2DQ5TA82 110 aaPredicted RBP12.96□□□□□ -0.34
SND1-214ENST00000489417 FAM19A1Q7Z5A9 133 aa12.96□□□□□ -0.34
SND1-214ENST00000489417 hADV29S1A0JD25 119 aa12.95□□□□□ -0.34
SND1-214ENST00000489417 BCE1O60756 84 aa12.94□□□□□ -0.34
SND1-214ENST00000489417 DYNC1H1Q14204 4646 aaKnown RBP12.93□□□□□ -0.34
SND1-214ENST00000489417 C9JAW5 83 aa12.93□□□□□ -0.34
SND1-214ENST00000489417 DNAL4O96015 105 aa12.93□□□□□ -0.34
SND1-214ENST00000489417 INAFM2P0DMQ5 153 aa12.93□□□□□ -0.34
SND1-214ENST00000489417 MTURNQ8N3F0 131 aa12.92□□□□□ -0.34
SND1-214ENST00000489417 PSORS1C2Q9UIG4 136 aa12.92□□□□□ -0.34
SND1-214ENST00000489417 DHRS4-AS1Q9P1J3 65 aa12.91□□□□□ -0.34
SND1-214ENST00000489417 PRLHP81277 87 aa12.9□□□□□ -0.34
SND1-214ENST00000489417 Q9BRP9 147 aa12.9□□□□□ -0.34
SND1-214ENST00000489417 PRO0461Q9UI25 63 aa12.9□□□□□ -0.34
SND1-214ENST00000489417 LRP1BQ9NZR2 4599 aa12.89□□□□□ -0.35
SND1-214ENST00000489417 UBE2AP49459 152 aa12.88□□□□□ -0.35
SND1-214ENST00000489417 H0Y9J4 135 aa12.88□□□□□ -0.35
SND1-214ENST00000489417 PKHD1P08F94 4074 aa12.87□□□□□ -0.35
SND1-214ENST00000489417 F8W1H4 67 aa12.87□□□□□ -0.35
SND1-214ENST00000489417 C1orf137Q5JT78 98 aa12.87□□□□□ -0.35
SND1-214ENST00000489417 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.86□□□□□ -0.35
SND1-214ENST00000489417 Q6ZQY7 126 aa12.86□□□□□ -0.35
SND1-214ENST00000489417 SMCR5Q8TEV8 140 aa12.86□□□□□ -0.35
SND1-214ENST00000489417 XGP55808 180 aa12.85□□□□□ -0.35
SND1-214ENST00000489417 KRTAP13-1Q8IUC0 172 aa12.85□□□□□ -0.35
SND1-214ENST00000489417 ORMDL1Q9P0S3 153 aa12.85□□□□□ -0.35
SND1-214ENST00000489417 H3BT86 120 aa12.84□□□□□ -0.35
SND1-214ENST00000489417 SMCPP49901 116 aaPredicted RBP12.84□□□□□ -0.35
SND1-214ENST00000489417 BAALC-AS2P0C853 105 aa12.83□□□□□ -0.36
SND1-214ENST00000489417 HIGD2AQ9BW72 106 aa12.83□□□□□ -0.36
SND1-214ENST00000489417 ERC2-IT1O76042 136 aa12.82□□□□□ -0.36
SND1-214ENST00000489417 ANKRD29Q8N6D5 301 aa12.82□□□□□ -0.36
SND1-214ENST00000489417 LINC01600Q96MT4 127 aa12.8□□□□□ -0.36
SND1-214ENST00000489417 OCIAD2Q56VL3 154 aa12.79□□□□□ -0.36
SND1-214ENST00000489417 IGLV7-43P04211 117 aa12.78□□□□□ -0.36
SND1-214ENST00000489417 H3BQ85 93 aa12.77□□□□□ -0.37
SND1-214ENST00000489417 ZNF861PO60384 105 aa12.77□□□□□ -0.37
SND1-214ENST00000489417 GHRHP01286 108 aa12.77□□□□□ -0.37
SND1-214ENST00000489417 ST20-AS1Q8NBB2 130 aa12.77□□□□□ -0.37
SND1-214ENST00000489417 TMEM256-PLSCR3K7ERE1 68 aa12.75□□□□□ -0.37
SND1-214ENST00000489417 APOBP04114 4563 aaKnown RBP12.74□□□□□ -0.37
SND1-214ENST00000489417 LINC01547P58512 204 aaPredicted RBP12.73□□□□□ -0.37
SND1-214ENST00000489417 DEFB105AQ8NG35 78 aa12.73□□□□□ -0.37
SND1-214ENST00000489417 IGLV5-48A0A075B6I7 105 aa12.72□□□□□ -0.37
SND1-214ENST00000489417 SMR3BP02814 79 aaPredicted RBP12.71□□□□□ -0.37
SND1-214ENST00000489417 ETDBQ3ZM63 59 aa12.71□□□□□ -0.37
SND1-214ENST00000489417 PPDPFLQ8WWR9 84 aa12.71□□□□□ -0.37
SND1-214ENST00000489417 EPPK1P58107 5090 aaKnown RBP12.71□□□□□ -0.37
SND1-214ENST00000489417 RPL37AP61513 92 aaKnown RBP12.71□□□□□ -0.38
SND1-214ENST00000489417 Q8N377 158 aa12.71□□□□□ -0.38
SND1-214ENST00000489417 TEN1Q86WV5 123 aa12.7□□□□□ -0.38
SND1-214ENST00000489417 CDK2AP2O75956 126 aa12.69□□□□□ -0.38
SND1-214ENST00000489417 TEX49A0A1B0GTD5 131 aa12.68□□□□□ -0.38
SND1-214ENST00000489417 LAMTOR3Q9UHA4 124 aa12.65□□□□□ -0.38
SND1-214ENST00000489417 ZNF706Q9Y5V0 76 aaPredicted RBP12.65□□□□□ -0.38
SND1-214ENST00000489417 NDUFV3P56181 108 aaKnown RBP12.64□□□□□ -0.39
SND1-214ENST00000489417 GAGE2AQ6NT46 116 aa12.64□□□□□ -0.39
SND1-214ENST00000489417 SPRR4Q96PI1 79 aa12.64□□□□□ -0.39
SND1-214ENST00000489417 SPRR1BP22528 89 aa12.63□□□□□ -0.39
SND1-214ENST00000489417 OBSCN-AS1Q96MR7 158 aa12.62□□□□□ -0.39
SND1-214ENST00000489417 A0A1B0GV72 72 aa12.61□□□□□ -0.39
SND1-214ENST00000489417 JMJD7-PLA2G4BH0Y9G9 81 aa12.61□□□□□ -0.39
SND1-214ENST00000489417 C3orf22Q8N5N4 141 aa12.61□□□□□ -0.39
SND1-214ENST00000489417 SMIM29Q86T20 159 aa12.6□□□□□ -0.39
SND1-214ENST00000489417 BIRC6Q9NR09 4857 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 173.3 ms