RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 A0A1B0GV72 72 aa5.58□□□□□ -1.52
VTI1A-207ENST00000489357 MT-ATP8P03928 68 aa5.58□□□□□ -1.52
VTI1A-207ENST00000489357 SYCNQ0VAF6 134 aa5.58□□□□□ -1.52
VTI1A-207ENST00000489357 GAGE2BQ13066 116 aa5.58□□□□□ -1.52
VTI1A-207ENST00000489357 GAGE2EQ4V326 116 aa5.58□□□□□ -1.52
VTI1A-207ENST00000489357 C6orf99Q4VX62 202 aa5.58□□□□□ -1.52
VTI1A-207ENST00000489357 LINC00643Q86TS7 51 aa5.58□□□□□ -1.52
VTI1A-207ENST00000489357 DIRC1Q969H9 104 aa5.58□□□□□ -1.52
VTI1A-207ENST00000489357 KRTAP4-7Q9BYR0 210 aa5.58□□□□□ -1.52
VTI1A-207ENST00000489357 Q9HAA7 133 aa5.58□□□□□ -1.52
VTI1A-207ENST00000489357 GAGE2DQ9UEU5 116 aa5.58□□□□□ -1.52
VTI1A-207ENST00000489357 ALMS1Q8TCU4 4167 aa5.58□□□□□ -1.52
VTI1A-207ENST00000489357 TRAV23DV6A0A075B6W5 121 aa5.57□□□□□ -1.52
VTI1A-207ENST00000489357 TRBV7-7A0A0K0K1E9 115 aa5.57□□□□□ -1.52
VTI1A-207ENST00000489357 hADV29S1A0JD25 119 aa5.57□□□□□ -1.52
VTI1A-207ENST00000489357 NCR3O14931 201 aa5.57□□□□□ -1.52
VTI1A-207ENST00000489357 VPREB1P12018 145 aa5.57□□□□□ -1.52
VTI1A-207ENST00000489357 PDE6GP18545 87 aa5.57□□□□□ -1.52
VTI1A-207ENST00000489357 Q6ZRU5 148 aa5.57□□□□□ -1.52
VTI1A-207ENST00000489357 Q8N1X5 172 aa5.57□□□□□ -1.52
VTI1A-207ENST00000489357 LINC00588Q9Y4M8 146 aa5.57□□□□□ -1.52
VTI1A-207ENST00000489357 PRR3P79522 188 aaKnown RBP5.56□□□□□ -1.52
VTI1A-207ENST00000489357 RPL18AQ02543 176 aaKnown RBP5.56□□□□□ -1.52
VTI1A-207ENST00000489357 APLNQ9ULZ1 77 aa5.56□□□□□ -1.52
VTI1A-207ENST00000489357 DNAH6Q9C0G6 4158 aa5.56□□□□□ -1.52
VTI1A-207ENST00000489357 ZNF73O43830 326 aaPredicted RBP5.55□□□□□ -1.52
VTI1A-207ENST00000489357 HIGD2BQ4VC39 106 aa5.55□□□□□ -1.52
VTI1A-207ENST00000489357 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.55□□□□□ -1.52
VTI1A-207ENST00000489357 Q8NDZ9 215 aa5.55□□□□□ -1.52
VTI1A-207ENST00000489357 LINC00526Q96FQ7 95 aa5.55□□□□□ -1.52
VTI1A-207ENST00000489357 KMT2AQ03164 3969 aa5.55□□□□□ -1.52
VTI1A-207ENST00000489357 IGLV5-37A0A075B6J1 123 aa5.54□□□□□ -1.52
VTI1A-207ENST00000489357 TRBV10-3A0A0K0K1G6 114 aa5.54□□□□□ -1.52
VTI1A-207ENST00000489357 ELOF1P60002 83 aaKnown RBP5.54□□□□□ -1.52
VTI1A-207ENST00000489357 PKIGQ9Y2B9 76 aa5.54□□□□□ -1.52
VTI1A-207ENST00000489357 HYDINQ4G0P3 5121 aa5.53□□□□□ -1.52
VTI1A-207ENST00000489357 CCKP06307 115 aa5.53□□□□□ -1.52
VTI1A-207ENST00000489357 COX7BP24311 80 aa5.53□□□□□ -1.52
VTI1A-207ENST00000489357 ATP5EP2Q5VTU8 51 aa5.53□□□□□ -1.52
VTI1A-207ENST00000489357 XAGE1AQ9HD64 81 aa5.53□□□□□ -1.52
VTI1A-207ENST00000489357 RYR2Q92736 4967 aa5.53□□□□□ -1.52
VTI1A-207ENST00000489357 LOC110117498A0A087WWA1 95 aa5.52□□□□□ -1.53
VTI1A-207ENST00000489357 USP17L23D6RBM5 183 aa5.52□□□□□ -1.53
VTI1A-207ENST00000489357 TTC32Q5I0X7 151 aa5.52□□□□□ -1.53
VTI1A-207ENST00000489357 GAGE2AQ6NT46 116 aa5.52□□□□□ -1.53
VTI1A-207ENST00000489357 Q6ZRP5 223 aa5.52□□□□□ -1.53
VTI1A-207ENST00000489357 LINC00476Q8WZB0 136 aa5.52□□□□□ -1.53
VTI1A-207ENST00000489357 KCNQ1DNQ9H478 68 aa5.52□□□□□ -1.53
VTI1A-207ENST00000489357 C14orf177Q52M58 125 aa5.51□□□□□ -1.53
VTI1A-207ENST00000489357 LCE5AQ5TCM9 118 aa5.51□□□□□ -1.53
VTI1A-207ENST00000489357 NKAPP1Q8N9T2 125 aa5.51□□□□□ -1.53
VTI1A-207ENST00000489357 C14orf132Q9NPU4 83 aa5.51□□□□□ -1.53
VTI1A-207ENST00000489357 LOC107984640A0A0U1RRK4 108 aa5.5□□□□□ -1.53
VTI1A-207ENST00000489357 LY6G6CO95867 125 aa5.5□□□□□ -1.53
VTI1A-207ENST00000489357 SLPIP03973 132 aa5.5□□□□□ -1.53
VTI1A-207ENST00000489357 RBM3P98179 157 aaKnown RBP5.5□□□□□ -1.53
VTI1A-207ENST00000489357 Q6JHZ5 121 aa5.5□□□□□ -1.53
VTI1A-207ENST00000489357 PRYO14603 147 aa5.49□□□□□ -1.53
VTI1A-207ENST00000489357 NDUFV3P56181 108 aaKnown RBP5.49□□□□□ -1.53
VTI1A-207ENST00000489357 CNBPP62633 177 aaKnown RBP5.49□□□□□ -1.53
VTI1A-207ENST00000489357 C9orf129Q5T035 196 aaKnown RBP5.49□□□□□ -1.53
VTI1A-207ENST00000489357 Q6ZQY7 126 aa5.49□□□□□ -1.53
VTI1A-207ENST00000489357 ANAPC13Q9BS18 74 aa5.49□□□□□ -1.53
VTI1A-207ENST00000489357 KRTAP4-9Q9BYQ8 210 aa5.49□□□□□ -1.53
VTI1A-207ENST00000489357 SMCR5Q8TEV8 140 aa5.48□□□□□ -1.53
VTI1A-207ENST00000489357 DSCR8Q96T75 97 aa5.48□□□□□ -1.53
VTI1A-207ENST00000489357 DHRS4-AS1Q9P1J3 65 aa5.48□□□□□ -1.53
VTI1A-207ENST00000489357 DNAH10Q8IVF4 4471 aa5.48□□□□□ -1.53
VTI1A-207ENST00000489357 DNAH17Q9UFH2 4485 aa5.47□□□□□ -1.53
VTI1A-207ENST00000489357 A0A1B0GW54 56 aa5.47□□□□□ -1.53
VTI1A-207ENST00000489357 SPRR1AP35321 89 aa5.47□□□□□ -1.53
VTI1A-207ENST00000489357 LAMTOR3Q9UHA4 124 aa5.47□□□□□ -1.53
VTI1A-207ENST00000489357 Q6ZQT0 140 aa5.46□□□□□ -1.54
VTI1A-207ENST00000489357 UBE2DNLQ8IWF7 75 aa5.46□□□□□ -1.54
VTI1A-207ENST00000489357 C7orf33Q8WU49 177 aa5.46□□□□□ -1.54
VTI1A-207ENST00000489357 UBL5Q9BZL1 73 aa5.46□□□□□ -1.54
VTI1A-207ENST00000489357 LINC00846Q9NV44 126 aa5.46□□□□□ -1.54
VTI1A-207ENST00000489357 IGLV1-50A0A075B6I6 118 aa5.45□□□□□ -1.54
VTI1A-207ENST00000489357 TRBV7-4A0A0J9YYF1 115 aa5.45□□□□□ -1.54
VTI1A-207ENST00000489357 Q6ZRX8 168 aa5.45□□□□□ -1.54
VTI1A-207ENST00000489357 DNAH2Q9P225 4427 aa5.45□□□□□ -1.54
VTI1A-207ENST00000489357 C16orf90A8MZG2 172 aa5.44□□□□□ -1.54
VTI1A-207ENST00000489357 MRPL55Q7Z7F7 128 aaKnown RBP5.44□□□□□ -1.54
VTI1A-207ENST00000489357 EPPK1P58107 5090 aaKnown RBP5.43□□□□□ -1.54
VTI1A-207ENST00000489357 KRTAP4-16G5E9R7 235 aaPredicted RBP5.43□□□□□ -1.54
VTI1A-207ENST00000489357 PSCAO43653 123 aa5.43□□□□□ -1.54
VTI1A-207ENST00000489357 HIST1H4AP62805 103 aaKnown RBP5.43□□□□□ -1.54
VTI1A-207ENST00000489357 SERTAD4-AS1Q5TG53 156 aa5.43□□□□□ -1.54
VTI1A-207ENST00000489357 FRAS1Q86XX4 4008 aa5.43□□□□□ -1.54
VTI1A-207ENST00000489357 ETDCA0A1B0GVM5 59 aa5.42□□□□□ -1.54
VTI1A-207ENST00000489357 ATOX1O00244 68 aa5.42□□□□□ -1.54
VTI1A-207ENST00000489357 Q6ZR54 194 aa5.42□□□□□ -1.54
VTI1A-207ENST00000489357 LINC00474Q9P2X8 69 aa5.42□□□□□ -1.54
VTI1A-207ENST00000489357 IGLV5-48A0A075B6I7 105 aa5.41□□□□□ -1.54
VTI1A-207ENST00000489357 FAM236AA0A1B0GUQ0 79 aa5.41□□□□□ -1.54
VTI1A-207ENST00000489357 FAM236BA0A1B0GV22 79 aa5.41□□□□□ -1.54
VTI1A-207ENST00000489357 BCE1O60756 84 aa5.41□□□□□ -1.54
VTI1A-207ENST00000489357 CXCL6P80162 114 aa5.41□□□□□ -1.54
VTI1A-207ENST00000489357 BIRC6Q9NR09 4857 aa5.4□□□□□ -1.54
VTI1A-207ENST00000489357 NBDYA0A0U1RRE5 68 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms