RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 CAMK2N2Q96S95 79 aa12.45□□□□□ -0.42
CCM2-216ENST00000488727 IGLV6-57P01721 117 aa12.44□□□□□ -0.42
CCM2-216ENST00000488727 LRP1BQ9NZR2 4599 aa12.44□□□□□ -0.42
CCM2-216ENST00000488727 ORMDL1Q9P0S3 153 aa12.44□□□□□ -0.42
CCM2-216ENST00000488727 SYCNQ0VAF6 134 aa12.42□□□□□ -0.42
CCM2-216ENST00000488727 Q6ZRU5 148 aa12.42□□□□□ -0.42
CCM2-216ENST00000488727 Q6Q795 121 aa12.42□□□□□ -0.42
CCM2-216ENST00000488727 C6orf99Q4VX62 202 aa12.41□□□□□ -0.42
CCM2-216ENST00000488727 BIRC6Q9NR09 4857 aa12.39□□□□□ -0.43
CCM2-216ENST00000488727 RPL18AQ02543 176 aaKnown RBP12.39□□□□□ -0.43
CCM2-216ENST00000488727 SDIM1Q6ZPB5 146 aa12.38□□□□□ -0.43
CCM2-216ENST00000488727 NDUFC2-KCTD14E9PQ53 114 aa12.37□□□□□ -0.43
CCM2-216ENST00000488727 LINC00575Q6W349 94 aa12.37□□□□□ -0.43
CCM2-216ENST00000488727 XAGE1AQ9HD64 81 aa12.37□□□□□ -0.43
CCM2-216ENST00000488727 FAM30AQ9NZY2 134 aa12.37□□□□□ -0.43
CCM2-216ENST00000488727 VPREB1P12018 145 aa12.36□□□□□ -0.43
CCM2-216ENST00000488727 GAGE2BQ13066 116 aa12.36□□□□□ -0.43
CCM2-216ENST00000488727 GAGE2EQ4V326 116 aa12.36□□□□□ -0.43
CCM2-216ENST00000488727 C9orf129Q5T035 196 aaKnown RBP12.36□□□□□ -0.43
CCM2-216ENST00000488727 GAGE2DQ9UEU5 116 aa12.36□□□□□ -0.43
CCM2-216ENST00000488727 TMEM256-PLSCR3K7ERE1 68 aa12.34□□□□□ -0.43
CCM2-216ENST00000488727 TRBV10-3A0A0K0K1G6 114 aa12.34□□□□□ -0.43
CCM2-216ENST00000488727 Q6ZSA8 131 aa12.34□□□□□ -0.43
CCM2-216ENST00000488727 TRAV23DV6A0A075B6W5 121 aa12.33□□□□□ -0.44
CCM2-216ENST00000488727 TRBV7-7A0A0K0K1E9 115 aa12.33□□□□□ -0.44
CCM2-216ENST00000488727 A0A1B0GV72 72 aa12.33□□□□□ -0.44
CCM2-216ENST00000488727 PANO1I0J062 215 aa12.32□□□□□ -0.44
CCM2-216ENST00000488727 GAGE2AQ6NT46 116 aa12.32□□□□□ -0.44
CCM2-216ENST00000488727 LINC00643Q86TS7 51 aa12.32□□□□□ -0.44
CCM2-216ENST00000488727 C14orf132Q9NPU4 83 aa12.32□□□□□ -0.44
CCM2-216ENST00000488727 APOBP04114 4563 aaKnown RBP12.32□□□□□ -0.44
CCM2-216ENST00000488727 JMJD7-PLA2G4BH0Y9G9 81 aa12.31□□□□□ -0.44
CCM2-216ENST00000488727 DIRC1Q969H9 104 aa12.31□□□□□ -0.44
CCM2-216ENST00000488727 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.31□□□□□ -0.44
CCM2-216ENST00000488727 KIAA1109Q2LD37 5005 aa12.31□□□□□ -0.44
CCM2-216ENST00000488727 DNAH8Q96JB1 4490 aa12.31□□□□□ -0.44
CCM2-216ENST00000488727 TRBV7-6A0A0J9YX20 115 aa12.31□□□□□ -0.44
CCM2-216ENST00000488727 hADV29S1A0JD25 119 aa12.31□□□□□ -0.44
CCM2-216ENST00000488727 M0R378 163 aa12.31□□□□□ -0.44
CCM2-216ENST00000488727 CHTF8P0CG12 524 aa12.31□□□□□ -0.44
CCM2-216ENST00000488727 SMCR5Q8TEV8 140 aa12.31□□□□□ -0.44
CCM2-216ENST00000488727 A0A096LNI7 61 aa12.29□□□□□ -0.44
CCM2-216ENST00000488727 HAMPP81172 84 aa12.29□□□□□ -0.44
CCM2-216ENST00000488727 LOC107984640A0A0U1RRK4 108 aa12.28□□□□□ -0.44
CCM2-216ENST00000488727 H3BQ85 93 aa12.28□□□□□ -0.44
CCM2-216ENST00000488727 TLX1NBP0CAT3 122 aa12.28□□□□□ -0.44
CCM2-216ENST00000488727 Q6ZRP5 223 aa12.28□□□□□ -0.44
CCM2-216ENST00000488727 IMUPQ9GZP8 106 aa12.28□□□□□ -0.44
CCM2-216ENST00000488727 IGKV2-24A0A0C4DH68 120 aa12.27□□□□□ -0.45
CCM2-216ENST00000488727 ZNF73O43830 326 aaPredicted RBP12.27□□□□□ -0.45
CCM2-216ENST00000488727 CDK2AP2O75956 126 aa12.27□□□□□ -0.45
CCM2-216ENST00000488727 SPACA4Q8TDM5 124 aa12.25□□□□□ -0.45
CCM2-216ENST00000488727 COX7BP24311 80 aa12.25□□□□□ -0.45
CCM2-216ENST00000488727 ELOF1P60002 83 aaKnown RBP12.25□□□□□ -0.45
CCM2-216ENST00000488727 PKIGQ9Y2B9 76 aa12.25□□□□□ -0.45
CCM2-216ENST00000488727 RYR1P21817 5038 aa12.24□□□□□ -0.45
CCM2-216ENST00000488727 CCKP06307 115 aa12.24□□□□□ -0.45
CCM2-216ENST00000488727 SCXQ7RTU7 201 aa12.24□□□□□ -0.45
CCM2-216ENST00000488727 PLA2G2DQ9UNK4 145 aa12.23□□□□□ -0.45
CCM2-216ENST00000488727 NDUFV3P56181 108 aaKnown RBP12.23□□□□□ -0.45
CCM2-216ENST00000488727 CIRBP-AS1Q8TBR5 109 aa12.23□□□□□ -0.45
CCM2-216ENST00000488727 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.22□□□□□ -0.45
CCM2-216ENST00000488727 HSPG2P98160 4391 aa12.21□□□□□ -0.45
CCM2-216ENST00000488727 ANAPC13Q9BS18 74 aa12.2□□□□□ -0.46
CCM2-216ENST00000488727 LINC00474Q9P2X8 69 aa12.2□□□□□ -0.46
CCM2-216ENST00000488727 Q6ZQY7 126 aa12.2□□□□□ -0.46
CCM2-216ENST00000488727 GHRHP01286 108 aa12.19□□□□□ -0.46
CCM2-216ENST00000488727 DPH3Q96FX2 82 aa12.19□□□□□ -0.46
CCM2-216ENST00000488727 LINC00846Q9NV44 126 aa12.18□□□□□ -0.46
CCM2-216ENST00000488727 IGLV5-37A0A075B6J1 123 aa12.17□□□□□ -0.46
CCM2-216ENST00000488727 LINC00528Q8N1L1 170 aa12.17□□□□□ -0.46
CCM2-216ENST00000488727 Q6JHZ5 121 aa12.17□□□□□ -0.46
CCM2-216ENST00000488727 NKAPP1Q8N9T2 125 aa12.17□□□□□ -0.46
CCM2-216ENST00000488727 LOC110117498A0A087WWA1 95 aa12.16□□□□□ -0.46
CCM2-216ENST00000488727 KCNQ1DNQ9H478 68 aa12.16□□□□□ -0.46
CCM2-216ENST00000488727 PLAC8Q9NZF1 115 aa12.16□□□□□ -0.46
CCM2-216ENST00000488727 RBM3P98179 157 aaKnown RBP12.15□□□□□ -0.46
CCM2-216ENST00000488727 SERTAD4-AS1Q5TG53 156 aa12.15□□□□□ -0.46
CCM2-216ENST00000488727 KRTAP17-1Q9BYP8 105 aa12.15□□□□□ -0.46
CCM2-216ENST00000488727 A0A1W2PNN7 141 aa12.14□□□□□ -0.47
CCM2-216ENST00000488727 FAM168BA1KXE4 195 aa12.14□□□□□ -0.47
CCM2-216ENST00000488727 SMR3BP02814 79 aaPredicted RBP12.14□□□□□ -0.47
CCM2-216ENST00000488727 C7orf33Q8WU49 177 aa12.14□□□□□ -0.47
CCM2-216ENST00000488727 Q6ZQT0 140 aa12.13□□□□□ -0.47
CCM2-216ENST00000488727 LAMTOR3Q9UHA4 124 aa12.13□□□□□ -0.47
CCM2-216ENST00000488727 KRTAP7-1Q8IUC3 87 aa12.12□□□□□ -0.47
CCM2-216ENST00000488727 EPM2AB3EWF7 344 aa12.11□□□□□ -0.47
CCM2-216ENST00000488727 PDE6GP18545 87 aa12.11□□□□□ -0.47
CCM2-216ENST00000488727 HERC2O95714 4834 aa12.09□□□□□ -0.47
CCM2-216ENST00000488727 PRYO14603 147 aa12.08□□□□□ -0.47
CCM2-216ENST00000488727 FAM19A5Q7Z5A7 132 aaPredicted RBP12.08□□□□□ -0.47
CCM2-216ENST00000488727 FAM236AA0A1B0GUQ0 79 aa12.08□□□□□ -0.48
CCM2-216ENST00000488727 FAM236BA0A1B0GV22 79 aa12.08□□□□□ -0.48
CCM2-216ENST00000488727 ATP5EP2Q5VTU8 51 aa12.08□□□□□ -0.48
CCM2-216ENST00000488727 FAT1Q14517 4588 aa12.07□□□□□ -0.48
CCM2-216ENST00000488727 DSCR8Q96T75 97 aa12.07□□□□□ -0.48
CCM2-216ENST00000488727 IGLV1-50A0A075B6I6 118 aa12.05□□□□□ -0.48
CCM2-216ENST00000488727 TRBV7-4A0A0J9YYF1 115 aa12.05□□□□□ -0.48
CCM2-216ENST00000488727 SPRR1AP35321 89 aa12.05□□□□□ -0.48
CCM2-216ENST00000488727 Q8N1X5 172 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 184.6 ms