RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 CYB5BO43169 146 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 NDUFB3O43676 98 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 NDUFC1O43677 76 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 PDE6DO43924 150 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 NDUFB1O75438 58 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 LEPROTL1O95214 131 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 IGKCP01834 107 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 FABP1P07148 127 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 SPINK8P0C7L1 97 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 LINC00032P0C843 101 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 SPART-AS1P0CW21 52 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 AKAIN1P0CW23 69 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 SAA1P0DJI8 122 aaPredicted RBP-0.09□□□□□ -2.42
SMC4-219ENST00000487747 PYYP10082 97 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 FABP2P12104 132 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 ACYP2P14621 99 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 G0S2P27469 103 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 CD52P31358 61 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 S100A3P33764 101 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 RPL35P42766 123 aaKnown RBP-0.09□□□□□ -2.42
SMC4-219ENST00000487747 DEFB1P60022 68 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 KRTDAPP60985 99 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 PCBD1P61457 104 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 UBE2G1P62253 170 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 RPL39P62891 51 aaKnown RBP-0.09□□□□□ -2.42
SMC4-219ENST00000487747 GNG3P63215 75 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 COTL1Q14019 142 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 SCGB2B2Q4G0G5 96 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 RPL39P5Q59GN2 51 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 TMEM170BQ5T4T1 132 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 C1orf134Q5TEV5 83 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 ATP5EP2Q5VTU8 51 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 SAMD13Q5VXD3 122 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 TRIQKQ629K1 86 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 DCUN1D2Q6PH85 259 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 Q6ZQY7 126 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 WFDC10BQ8IUB3 73 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 IFT20Q8IY31 132 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 DEFB107AQ8IZN7 70 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 SVBPQ8N300 66 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 SMIM20Q8N5G0 67 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 TET1Q8NFU7 2136 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 OR13C6PQ8NH95 151 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 CDC26Q8NHZ8 85 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 Q8TAT8 98 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 COX7B2Q8TF08 81 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 DEFB104AQ8WTQ1 72 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 S100ZQ8WXG8 99 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 MAFIPQ8WZ33 124 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 BORCS7Q96B45 105 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 RPL39LQ96EH5 51 aaKnown RBP-0.09□□□□□ -2.42
SMC4-219ENST00000487747 ARHGAP5-AS1Q96IT6 56 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 PFDN5Q99471 154 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 S100A13Q99584 98 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 CCL19Q99731 98 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 PMCHL2Q9BQD1 86 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 PDCD10Q9BUL8 212 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 RHPN1-AS1Q9BWJ2 59 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 CCDC90BQ9GZT6 254 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 BIN3Q9NQY0 253 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 TMEM167BQ9NRX6 74 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 FKBP11Q9NYL4 201 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 PSENENQ9NZ42 101 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 CALML5Q9NZT1 146 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 MED11Q9P086 117 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 UQCR10Q9UDW1 63 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 PRO1854Q9UHT4 67 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 UFC1Q9Y3C8 167 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.09□□□□□ -2.42
SMC4-219ENST00000487747 TSC2P49815 1807 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 NUP98P52948 1817 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 PSME4Q14997 1843 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 KIAA1549LQ6ZVL6 1849 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 XIRP1Q702N8 1843 aaKnown RBP-0.09□□□□□ -2.42
SMC4-219ENST00000487747 KIF13AQ9H1H9 1805 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 WNK1Q9H4A3 2382 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 SCN7AQ01118 1682 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 F5P12259 2224 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 UNC13CQ8NB66 2214 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 PLCE1Q9P212 2302 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 RGPD8O14715 1765 aaPredicted RBP-0.09□□□□□ -2.42
SMC4-219ENST00000487747 ANKRD36CQ5JPF3 1778 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 KDM3BQ7LBC6 1761 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 N4BP2Q86UW6 1770 aaPredicted RBP-0.09□□□□□ -2.42
SMC4-219ENST00000487747 SCN11AQ9UI33 1791 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 DLEC1Q9Y238 1755 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 ARFGEF2Q9Y6D5 1785 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 PKHD1P08F94 4074 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 CMYA5Q8N3K9 4069 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 TNRC18O15417 2968 aaPredicted RBP-0.09□□□□□ -2.42
SMC4-219ENST00000487747 CHD3Q12873 2000 aaKnown RBP-0.09□□□□□ -2.42
SMC4-219ENST00000487747 ACANP16112 2415 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 ABCA2Q9BZC7 2435 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 MEGF8Q7Z7M0 2845 aa-0.09□□□□□ -2.42
SMC4-219ENST00000487747 TRPM7Q96QT4 1865 aa-0.1□□□□□ -2.42
SMC4-219ENST00000487747 HEATR1Q9H583 2144 aaKnown RBP-0.1□□□□□ -2.42
SMC4-219ENST00000487747 CHD1O14646 1710 aa-0.1□□□□□ -2.42
SMC4-219ENST00000487747 POLR1AO95602 1720 aaPredicted RBP-0.1□□□□□ -2.42
SMC4-219ENST00000487747 DDX60LQ5H9U9 1706 aaKnown RBP-0.1□□□□□ -2.42
SMC4-219ENST00000487747 MON2Q7Z3U7 1717 aa-0.1□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms