RNA–Protein interactions for RNA: ENST00000485952.1

SPTLC3-206, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 3

Gene SPTLC3, Length 277 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-206ENST00000485952 C1orf196B1AJZ1 125 aa1.9□□□□□ -2.11
SPTLC3-206ENST00000485952 HMGB3O15347 200 aaKnown RBP1.9□□□□□ -2.11
SPTLC3-206ENST00000485952 KRTAP12-3P60328 96 aa1.9□□□□□ -2.11
SPTLC3-206ENST00000485952 HIST1H4AP62805 103 aaKnown RBP1.9□□□□□ -2.11
SPTLC3-206ENST00000485952 UBE2BP63146 152 aa1.9□□□□□ -2.11
SPTLC3-206ENST00000485952 FP248Q71RG6 208 aaPredicted RBP1.9□□□□□ -2.11
SPTLC3-206ENST00000485952 Q86TA4 180 aa1.9□□□□□ -2.11
SPTLC3-206ENST00000485952 BTF3L4Q96K17 158 aa1.9□□□□□ -2.11
SPTLC3-206ENST00000485952 AP1S3Q96PC3 154 aa1.9□□□□□ -2.11
SPTLC3-206ENST00000485952 RETNLBQ9BQ08 111 aa1.9□□□□□ -2.11
SPTLC3-206ENST00000485952 TCEAL7Q9BRU2 100 aa1.9□□□□□ -2.11
SPTLC3-206ENST00000485952 TIMM21Q9BVV7 248 aa1.9□□□□□ -2.11
SPTLC3-206ENST00000485952 MRPL35Q9NZE8 188 aaKnown RBP1.9□□□□□ -2.11
SPTLC3-206ENST00000485952 F2Z2F3 143 aa1.89□□□□□ -2.11
SPTLC3-206ENST00000485952 J3QQQ9 107 aa1.89□□□□□ -2.11
SPTLC3-206ENST00000485952 NUPR1O60356 82 aa1.89□□□□□ -2.11
SPTLC3-206ENST00000485952 PPBPP02775 128 aa1.89□□□□□ -2.11
SPTLC3-206ENST00000485952 MT1HP80294 61 aa1.89□□□□□ -2.11
SPTLC3-206ENST00000485952 SERF2P84101 59 aa1.89□□□□□ -2.11
SPTLC3-206ENST00000485952 TRIQKQ629K1 86 aa1.89□□□□□ -2.11
SPTLC3-206ENST00000485952 SPAG11AQ6PDA7 123 aa1.89□□□□□ -2.11
SPTLC3-206ENST00000485952 TOMM6Q96B49 74 aa1.89□□□□□ -2.11
SPTLC3-206ENST00000485952 KRTAP4-1Q9BYQ7 146 aa1.89□□□□□ -2.11
SPTLC3-206ENST00000485952 RNASE7Q9H1E1 156 aaKnown RBP1.89□□□□□ -2.11
SPTLC3-206ENST00000485952 TNFSF18Q9UNG2 199 aa1.89□□□□□ -2.11
SPTLC3-206ENST00000485952 HSPB11Q9Y547 144 aa1.89□□□□□ -2.11
SPTLC3-206ENST00000485952 IGKV2D-26A0A0A0MRZ7 120 aa1.88□□□□□ -2.11
SPTLC3-206ENST00000485952 MGPP08493 103 aa1.88□□□□□ -2.11
SPTLC3-206ENST00000485952 TRGC1P0CF51 173 aa1.88□□□□□ -2.11
SPTLC3-206ENST00000485952 TMEM258P61165 79 aa1.88□□□□□ -2.11
SPTLC3-206ENST00000485952 UBE2G1P62253 170 aa1.88□□□□□ -2.11
SPTLC3-206ENST00000485952 TEX261Q6UWH6 196 aa1.88□□□□□ -2.11
SPTLC3-206ENST00000485952 KTN1-AS1Q86SY8 53 aa1.88□□□□□ -2.11
SPTLC3-206ENST00000485952 SIGMAR1Q99720 223 aa1.88□□□□□ -2.11
SPTLC3-206ENST00000485952 PSMG3Q9BT73 122 aaPredicted RBP1.88□□□□□ -2.11
SPTLC3-206ENST00000485952 CDC42SE2Q9NRR3 84 aa1.88□□□□□ -2.11
SPTLC3-206ENST00000485952 MACF1Q9UPN3 7388 aaKnown RBP1.88□□□□□ -2.11
SPTLC3-206ENST00000485952 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.87□□□□□ -2.11
SPTLC3-206ENST00000485952 IGKV2-29A2NJV5 120 aaPredicted RBP1.87□□□□□ -2.11
SPTLC3-206ENST00000485952 I3L3M4 83 aa1.87□□□□□ -2.11
SPTLC3-206ENST00000485952 PDE6DO43924 150 aa1.87□□□□□ -2.11
SPTLC3-206ENST00000485952 BCE1O60756 84 aa1.87□□□□□ -2.11
SPTLC3-206ENST00000485952 KRTAP19-2Q3LHN2 52 aa1.87□□□□□ -2.11
SPTLC3-206ENST00000485952 CCDC32Q9BV29 185 aa1.87□□□□□ -2.11
SPTLC3-206ENST00000485952 SMIM3Q9BZL3 60 aa1.87□□□□□ -2.11
SPTLC3-206ENST00000485952 TRAV9-1A0A075B6T8 112 aa1.86□□□□□ -2.11
SPTLC3-206ENST00000485952 CCDC160A6NGH7 325 aa1.86□□□□□ -2.11
SPTLC3-206ENST00000485952 M0R2T5 61 aa1.86□□□□□ -2.11
SPTLC3-206ENST00000485952 NDUFA1O15239 70 aa1.86□□□□□ -2.11
SPTLC3-206ENST00000485952 LYRM1O43325 122 aa1.86□□□□□ -2.11
SPTLC3-206ENST00000485952 SIX6O95475 246 aa1.86□□□□□ -2.11
SPTLC3-206ENST00000485952 MPC2O95563 127 aa1.86□□□□□ -2.11
SPTLC3-206ENST00000485952 IGLC6P0CF74 106 aa1.86□□□□□ -2.11
SPTLC3-206ENST00000485952 IL7P13232 177 aa1.86□□□□□ -2.11
SPTLC3-206ENST00000485952 SPAG11BQ08648 103 aa1.86□□□□□ -2.11
SPTLC3-206ENST00000485952 PCOTHQ58A44 107 aa1.86□□□□□ -2.11
SPTLC3-206ENST00000485952 C5orf38Q86SI9 138 aa1.86□□□□□ -2.11
SPTLC3-206ENST00000485952 BAGE2Q86Y30 109 aa1.86□□□□□ -2.11
SPTLC3-206ENST00000485952 C9orf62Q8N4C0 152 aa1.86□□□□□ -2.11
SPTLC3-206ENST00000485952 PPP1R1CQ8WVI7 109 aa1.86□□□□□ -2.11
SPTLC3-206ENST00000485952 FCGBPQ9Y6R7 5405 aaPredicted RBP1.86□□□□□ -2.11
SPTLC3-206ENST00000485952 SSPOA2VEC9 5147 aa1.86□□□□□ -2.11
SPTLC3-206ENST00000485952 USH2AO75445 5202 aa1.85□□□□□ -2.11
SPTLC3-206ENST00000485952 TRBV6-5A0A0K0K1A5 114 aa1.85□□□□□ -2.11
SPTLC3-206ENST00000485952 TRBV30A0A0K0K1B3 111 aa1.85□□□□□ -2.11
SPTLC3-206ENST00000485952 TRBV10-2A0A0K0K1G8 114 aa1.85□□□□□ -2.11
SPTLC3-206ENST00000485952 CTXND1A0A1B0GTU2 59 aa1.85□□□□□ -2.11
SPTLC3-206ENST00000485952 HMSDA8MTL9 139 aa1.85□□□□□ -2.11
SPTLC3-206ENST00000485952 AKR1C3P42330 323 aa1.85□□□□□ -2.11
SPTLC3-206ENST00000485952 UNQ6190/PRO20217Q6UXQ8 127 aa1.85□□□□□ -2.11
SPTLC3-206ENST00000485952 C6orf48Q9UBA6 75 aa1.85□□□□□ -2.11
SPTLC3-206ENST00000485952 C22orf24Q9Y442 160 aa1.85□□□□□ -2.11
SPTLC3-206ENST00000485952 TRAV13-1A0A0B4J241 112 aa1.84□□□□□ -2.11
SPTLC3-206ENST00000485952 SPINK1P00995 79 aa1.84□□□□□ -2.11
SPTLC3-206ENST00000485952 IFNA1P01562 189 aa1.84□□□□□ -2.11
SPTLC3-206ENST00000485952 DEFA3P59666 94 aa1.84□□□□□ -2.11
SPTLC3-206ENST00000485952 KRTAP13-4Q3LI77 160 aa1.84□□□□□ -2.11
SPTLC3-206ENST00000485952 SMIM15Q7Z3B0 74 aa1.84□□□□□ -2.11
SPTLC3-206ENST00000485952 CNFNQ9BYD5 112 aa1.84□□□□□ -2.11
SPTLC3-206ENST00000485952 BIN3Q9NQY0 253 aa1.84□□□□□ -2.11
SPTLC3-206ENST00000485952 NDUFA12Q9UI09 145 aa1.84□□□□□ -2.11
SPTLC3-206ENST00000485952 CYSLTR1Q9Y271 337 aa1.84□□□□□ -2.11
SPTLC3-206ENST00000485952 TRBV27A0A0K0K1C4 114 aa1.83□□□□□ -2.12
SPTLC3-206ENST00000485952 C7orf77A4D0Y5 90 aa1.83□□□□□ -2.12
SPTLC3-206ENST00000485952 ZNF727A8MUV8 499 aa1.83□□□□□ -2.12
SPTLC3-206ENST00000485952 POLR2KP53803 58 aaKnown RBP1.83□□□□□ -2.12
SPTLC3-206ENST00000485952 FXYD2P54710 66 aa1.83□□□□□ -2.12
SPTLC3-206ENST00000485952 KRTAP12-1P59990 96 aa1.83□□□□□ -2.12
SPTLC3-206ENST00000485952 RPL39LQ96EH5 51 aaKnown RBP1.83□□□□□ -2.12
SPTLC3-206ENST00000485952 SCGB3A1Q96QR1 104 aa1.83□□□□□ -2.12
SPTLC3-206ENST00000485952 ST20Q9HBF5 79 aa1.83□□□□□ -2.12
SPTLC3-206ENST00000485952 UBE2D4Q9Y2X8 147 aa1.83□□□□□ -2.12
SPTLC3-206ENST00000485952 BORCS7-ASMTA0A0B4J1R7 106 aa1.82□□□□□ -2.12
SPTLC3-206ENST00000485952 MAP1LC3B2A6NCE7 125 aa1.82□□□□□ -2.12
SPTLC3-206ENST00000485952 PPP1R17O96001 155 aa1.82□□□□□ -2.12
SPTLC3-206ENST00000485952 FCER1GP30273 86 aa1.82□□□□□ -2.12
SPTLC3-206ENST00000485952 RPL35P42766 123 aaKnown RBP1.82□□□□□ -2.12
SPTLC3-206ENST00000485952 FOXA3P55318 350 aaPredicted RBP1.82□□□□□ -2.12
SPTLC3-206ENST00000485952 KRTAP12-4P60329 112 aa1.82□□□□□ -2.12
SPTLC3-206ENST00000485952 AKR1C8PQ5T2L2 129 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms