RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 PRLHP81277 87 aa8.11□□□□□ -1.11
HDAC1-208ENST00000482310 HSD52Q0P140 79 aa8.11□□□□□ -1.11
HDAC1-208ENST00000482310 PPDPFQ9H3Y8 114 aa8.11□□□□□ -1.11
HDAC1-208ENST00000482310 FXYD2P54710 66 aa8.1□□□□□ -1.11
HDAC1-208ENST00000482310 TAL2Q16559 108 aa8.1□□□□□ -1.11
HDAC1-208ENST00000482310 ETDCA0A1B0GVM5 59 aa8.09□□□□□ -1.11
HDAC1-208ENST00000482310 RPL13AP40429 203 aaKnown RBP8.09□□□□□ -1.11
HDAC1-208ENST00000482310 KCNQ1DNQ9H478 68 aa8.09□□□□□ -1.11
HDAC1-208ENST00000482310 MYCBP2O75592 4640 aa8.08□□□□□ -1.12
HDAC1-208ENST00000482310 TRAV13-2A0A0B4J235 113 aa8.08□□□□□ -1.12
HDAC1-208ENST00000482310 H7C2G1 150 aa8.08□□□□□ -1.12
HDAC1-208ENST00000482310 INAFM2P0DMQ5 153 aa8.08□□□□□ -1.12
HDAC1-208ENST00000482310 CTAG1AP78358 180 aa8.08□□□□□ -1.12
HDAC1-208ENST00000482310 RAB37Q96AX2 223 aa8.08□□□□□ -1.12
HDAC1-208ENST00000482310 ZNF73O43830 326 aaPredicted RBP8.07□□□□□ -1.12
HDAC1-208ENST00000482310 CFC1BP0CG36 223 aa8.07□□□□□ -1.12
HDAC1-208ENST00000482310 CFC1P0CG37 223 aa8.07□□□□□ -1.12
HDAC1-208ENST00000482310 TMEM238LA0A1B0GVL6 79 aa8.06□□□□□ -1.12
HDAC1-208ENST00000482310 A6NJY4 79 aa8.06□□□□□ -1.12
HDAC1-208ENST00000482310 DIRC1Q969H9 104 aa8.06□□□□□ -1.12
HDAC1-208ENST00000482310 NHP2Q9NX24 153 aaKnown RBP8.06□□□□□ -1.12
HDAC1-208ENST00000482310 K7ERJ3 54 aa8.05□□□□□ -1.12
HDAC1-208ENST00000482310 ZNF861PO60384 105 aa8.05□□□□□ -1.12
HDAC1-208ENST00000482310 RPL28P46779 137 aaKnown RBP8.05□□□□□ -1.12
HDAC1-208ENST00000482310 HINT1P49773 126 aaPredicted RBP8.05□□□□□ -1.12
HDAC1-208ENST00000482310 C6orf99Q4VX62 202 aa8.05□□□□□ -1.12
HDAC1-208ENST00000482310 HIGD2AQ9BW72 106 aa8.05□□□□□ -1.12
HDAC1-208ENST00000482310 DMBT1Q9UGM3 2413 aaPredicted RBP8.05□□□□□ -1.12
HDAC1-208ENST00000482310 FLG2Q5D862 2391 aaPredicted RBP8.05□□□□□ -1.12
HDAC1-208ENST00000482310 SPRR1AP35321 89 aa8.04□□□□□ -1.12
HDAC1-208ENST00000482310 Q1RN00 199 aa8.04□□□□□ -1.12
HDAC1-208ENST00000482310 SPINK6Q6UWN8 80 aa8.04□□□□□ -1.12
HDAC1-208ENST00000482310 SMIM11BQ8TCY0 68 aa8.04□□□□□ -1.12
HDAC1-208ENST00000482310 CBY1Q9Y3M2 126 aa8.04□□□□□ -1.12
HDAC1-208ENST00000482310 A0A0B4J2C4 111 aa8.03□□□□□ -1.12
HDAC1-208ENST00000482310 B5MCH6 92 aa8.03□□□□□ -1.12
HDAC1-208ENST00000482310 BVES-AS1Q5T3Y7 98 aa8.03□□□□□ -1.12
HDAC1-208ENST00000482310 KRTAP13-1Q8IUC0 172 aa8.03□□□□□ -1.12
HDAC1-208ENST00000482310 KRTAP4-16G5E9R7 235 aaPredicted RBP8.02□□□□□ -1.13
HDAC1-208ENST00000482310 H0Y9J4 135 aa8.02□□□□□ -1.13
HDAC1-208ENST00000482310 BATFQ16520 125 aa8.02□□□□□ -1.13
HDAC1-208ENST00000482310 COX7BP24311 80 aa8.01□□□□□ -1.13
HDAC1-208ENST00000482310 Q6ZRX8 168 aa8.01□□□□□ -1.13
HDAC1-208ENST00000482310 LCE2BO14633 110 aa8□□□□□ -1.13
HDAC1-208ENST00000482310 M0R143 59 aa7.99□□□□□ -1.13
HDAC1-208ENST00000482310 SMCR5Q8TEV8 140 aa7.99□□□□□ -1.13
HDAC1-208ENST00000482310 Q9BRP9 147 aa7.99□□□□□ -1.13
HDAC1-208ENST00000482310 PRO1854Q9UHT4 67 aa7.99□□□□□ -1.13
HDAC1-208ENST00000482310 ERC2-IT1O76042 136 aa7.98□□□□□ -1.13
HDAC1-208ENST00000482310 PCP4L1A6NKN8 68 aa7.97□□□□□ -1.13
HDAC1-208ENST00000482310 ELOF1P60002 83 aaKnown RBP7.97□□□□□ -1.13
HDAC1-208ENST00000482310 A0A1B0GWB2 263 aa7.96□□□□□ -1.14
HDAC1-208ENST00000482310 ANAPC11Q9NYG5 84 aa7.96□□□□□ -1.14
HDAC1-208ENST00000482310 FAT3Q8TDW7 4589 aa7.96□□□□□ -1.14
HDAC1-208ENST00000482310 VAMP3Q15836 100 aa7.95□□□□□ -1.14
HDAC1-208ENST00000482310 LRP1Q07954 4544 aaKnown RBP7.95□□□□□ -1.14
HDAC1-208ENST00000482310 TSPAN13O95857 204 aa7.94□□□□□ -1.14
HDAC1-208ENST00000482310 PSMB2P49721 201 aa7.94□□□□□ -1.14
HDAC1-208ENST00000482310 TRBV7-6A0A0J9YX20 115 aa7.93□□□□□ -1.14
HDAC1-208ENST00000482310 ST20-AS1Q8NBB2 130 aa7.93□□□□□ -1.14
HDAC1-208ENST00000482310 TRIAP1O43715 76 aa7.92□□□□□ -1.14
HDAC1-208ENST00000482310 KRTAP1-4P0C5Y4 121 aa7.92□□□□□ -1.14
HDAC1-208ENST00000482310 GAGE2AQ6NT46 116 aa7.92□□□□□ -1.14
HDAC1-208ENST00000482310 SPRR4Q96PI1 79 aa7.92□□□□□ -1.14
HDAC1-208ENST00000482310 NAA38Q9BRA0 125 aaKnown RBP7.92□□□□□ -1.14
HDAC1-208ENST00000482310 DHRS4-AS1Q9P1J3 65 aa7.92□□□□□ -1.14
HDAC1-208ENST00000482310 PRR26Q8N8Z3 221 aa7.91□□□□□ -1.14
HDAC1-208ENST00000482310 ZNF706Q9Y5V0 76 aaPredicted RBP7.91□□□□□ -1.14
HDAC1-208ENST00000482310 SLC25A20O43772 301 aa7.9□□□□□ -1.14
HDAC1-208ENST00000482310 DEFB105AQ8NG35 78 aa7.9□□□□□ -1.14
HDAC1-208ENST00000482310 LINC00575Q6W349 94 aa7.89□□□□□ -1.15
HDAC1-208ENST00000482310 CLEC2BQ92478 149 aa7.89□□□□□ -1.15
HDAC1-208ENST00000482310 A0A087X002 238 aa7.88□□□□□ -1.15
HDAC1-208ENST00000482310 J3QL48 77 aa7.88□□□□□ -1.15
HDAC1-208ENST00000482310 FAM218AQ96MZ4 157 aa7.88□□□□□ -1.15
HDAC1-208ENST00000482310 HMCN2Q8NDA2 5059 aa7.88□□□□□ -1.15
HDAC1-208ENST00000482310 hADV29S1A0JD25 119 aa7.87□□□□□ -1.15
HDAC1-208ENST00000482310 OXTP01178 125 aa7.87□□□□□ -1.15
HDAC1-208ENST00000482310 SCGB1C2P0DMR2 95 aa7.87□□□□□ -1.15
HDAC1-208ENST00000482310 LINC01600Q96MT4 127 aa7.87□□□□□ -1.15
HDAC1-208ENST00000482310 SNHG12Q9BXW3 62 aa7.86□□□□□ -1.15
HDAC1-208ENST00000482310 IGLV9-49A0A0B4J1Y8 123 aa7.85□□□□□ -1.15
HDAC1-208ENST00000482310 KRTAP29-1A8MX34 341 aaPredicted RBP7.85□□□□□ -1.15
HDAC1-208ENST00000482310 H0YGX0 51 aa7.85□□□□□ -1.15
HDAC1-208ENST00000482310 COX6CP09669 75 aa7.85□□□□□ -1.15
HDAC1-208ENST00000482310 Q6ZQY7 126 aa7.85□□□□□ -1.15
HDAC1-208ENST00000482310 C3orf22Q8N5N4 141 aa7.85□□□□□ -1.15
HDAC1-208ENST00000482310 UBR4Q5T4S7 5183 aa7.84□□□□□ -1.15
HDAC1-208ENST00000482310 CRYGAP11844 174 aa7.84□□□□□ -1.15
HDAC1-208ENST00000482310 SMCPP49901 116 aaPredicted RBP7.84□□□□□ -1.15
HDAC1-208ENST00000482310 TNXBP22105 4242 aa7.83□□□□□ -1.16
HDAC1-208ENST00000482310 MT1HL1P0DM35 61 aa7.83□□□□□ -1.16
HDAC1-208ENST00000482310 KRTAP13-2Q52LG2 175 aa7.83□□□□□ -1.16
HDAC1-208ENST00000482310 H3BUT2 72 aa7.82□□□□□ -1.16
HDAC1-208ENST00000482310 FAM229BQ4G0N7 80 aa7.82□□□□□ -1.16
HDAC1-208ENST00000482310 LINC00483Q53H64 154 aa7.82□□□□□ -1.16
HDAC1-208ENST00000482310 C9orf153Q5TBE3 101 aa7.82□□□□□ -1.16
HDAC1-208ENST00000482310 TYMSOSQ8TAI1 123 aa7.82□□□□□ -1.16
HDAC1-208ENST00000482310 TAX1BP3O14907 124 aa7.81□□□□□ -1.16
HDAC1-208ENST00000482310 SNCGO76070 127 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms