RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 CCKP06307 115 aa1.67□□□□□ -2.14
SMC6-208ENST00000481708 DYNLRB2Q8TF09 96 aa1.67□□□□□ -2.14
SMC6-208ENST00000481708 ERHP84090 104 aaKnown RBP1.67□□□□□ -2.14
SMC6-208ENST00000481708 Q1T7F1 81 aa1.67□□□□□ -2.14
SMC6-208ENST00000481708 TRBV6-7A0A0A0MS04 114 aa1.67□□□□□ -2.14
SMC6-208ENST00000481708 COX7CP15954 63 aa1.67□□□□□ -2.14
SMC6-208ENST00000481708 KRTAP10-7P60409 375 aaPredicted RBP1.67□□□□□ -2.14
SMC6-208ENST00000481708 RHOHQ15669 191 aa1.67□□□□□ -2.14
SMC6-208ENST00000481708 IQCJQ1A5X6 159 aa1.67□□□□□ -2.14
SMC6-208ENST00000481708 LCE1EQ5T753 118 aa1.67□□□□□ -2.14
SMC6-208ENST00000481708 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.67□□□□□ -2.14
SMC6-208ENST00000481708 TOMM5Q8N4H5 51 aa1.67□□□□□ -2.14
SMC6-208ENST00000481708 C20orf78Q9BR46 151 aa1.67□□□□□ -2.14
SMC6-208ENST00000481708 ATG5Q9H1Y0 275 aa1.67□□□□□ -2.14
SMC6-208ENST00000481708 FAUP35544 74 aaKnown RBP1.66□□□□□ -2.14
SMC6-208ENST00000481708 ARHGAP5-AS1Q96IT6 56 aa1.66□□□□□ -2.14
SMC6-208ENST00000481708 SMIM7Q9BQ49 75 aa1.66□□□□□ -2.14
SMC6-208ENST00000481708 BAALC-AS2P0C853 105 aa1.66□□□□□ -2.14
SMC6-208ENST00000481708 PIGBOS1A0A0B4J2F0 54 aa1.66□□□□□ -2.14
SMC6-208ENST00000481708 CRYM-AS1A6NIL9 109 aa1.66□□□□□ -2.14
SMC6-208ENST00000481708 M0R2N4 97 aa1.66□□□□□ -2.14
SMC6-208ENST00000481708 HINT1P49773 126 aaPredicted RBP1.66□□□□□ -2.14
SMC6-208ENST00000481708 LELP1Q5T871 98 aa1.66□□□□□ -2.14
SMC6-208ENST00000481708 C15orf53Q8NAA6 179 aa1.66□□□□□ -2.14
SMC6-208ENST00000481708 FXYD6Q9H0Q3 95 aa1.66□□□□□ -2.14
SMC6-208ENST00000481708 PIGYQ3MUY2 71 aa1.66□□□□□ -2.14
SMC6-208ENST00000481708 NMES1Q9C002 83 aa1.66□□□□□ -2.14
SMC6-208ENST00000481708 IGKV2D-24A0A075B6R9 120 aa1.65□□□□□ -2.15
SMC6-208ENST00000481708 A6NIN4 97 aa1.65□□□□□ -2.15
SMC6-208ENST00000481708 PSCAO43653 123 aa1.65□□□□□ -2.15
SMC6-208ENST00000481708 ERC2-IT1O76042 136 aa1.65□□□□□ -2.15
SMC6-208ENST00000481708 SFT2D2O95562 160 aa1.65□□□□□ -2.15
SMC6-208ENST00000481708 RNASE3P12724 160 aaKnown RBP1.65□□□□□ -2.15
SMC6-208ENST00000481708 KRTAP5-9P26371 169 aa1.65□□□□□ -2.15
SMC6-208ENST00000481708 CASC2Q6XLA1 102 aa1.65□□□□□ -2.15
SMC6-208ENST00000481708 C6orf201Q7Z4U5 140 aa1.65□□□□□ -2.15
SMC6-208ENST00000481708 TMEM167AQ8TBQ9 72 aa1.65□□□□□ -2.15
SMC6-208ENST00000481708 ZNF431Q8TF32 576 aaPredicted RBP1.65□□□□□ -2.15
SMC6-208ENST00000481708 BET1LQ9NYM9 111 aa1.65□□□□□ -2.15
SMC6-208ENST00000481708 MUC5BQ9HC84 5762 aaPredicted RBP1.65□□□□□ -2.15
SMC6-208ENST00000481708 TRBV7-1A0A0A6YYK4 115 aa1.65□□□□□ -2.15
SMC6-208ENST00000481708 SPTSSBQ8NFR3 76 aa1.65□□□□□ -2.15
SMC6-208ENST00000481708 TMEM30CPA0ZSE6 113 aa1.65□□□□□ -2.15
SMC6-208ENST00000481708 I3L2K1 104 aa1.65□□□□□ -2.15
SMC6-208ENST00000481708 NDUFA4O00483 81 aa1.65□□□□□ -2.15
SMC6-208ENST00000481708 C9orf116Q5BN46 136 aaPredicted RBP1.65□□□□□ -2.15
SMC6-208ENST00000481708 C1orf137Q5JT78 98 aa1.65□□□□□ -2.15
SMC6-208ENST00000481708 S100A13Q99584 98 aa1.65□□□□□ -2.15
SMC6-208ENST00000481708 PPYP01298 95 aa1.64□□□□□ -2.15
SMC6-208ENST00000481708 UBE2DNLQ8IWF7 75 aa1.64□□□□□ -2.15
SMC6-208ENST00000481708 LINC01600Q96MT4 127 aa1.64□□□□□ -2.15
SMC6-208ENST00000481708 SPANXDQ9BXN6 97 aa1.64□□□□□ -2.15
SMC6-208ENST00000481708 IGLC7A0M8Q6 106 aa1.64□□□□□ -2.15
SMC6-208ENST00000481708 SNCGO76070 127 aa1.64□□□□□ -2.15
SMC6-208ENST00000481708 CCL3L1P16619 93 aa1.64□□□□□ -2.15
SMC6-208ENST00000481708 NMSQ5H8A3 153 aa1.64□□□□□ -2.15
SMC6-208ENST00000481708 SPANXN5Q5MJ07 72 aa1.64□□□□□ -2.15
SMC6-208ENST00000481708 TMEM141Q96I45 108 aa1.64□□□□□ -2.15
SMC6-208ENST00000481708 VAMP8Q9BV40 100 aa1.64□□□□□ -2.15
SMC6-208ENST00000481708 CACFD1Q9UGQ2 172 aa1.64□□□□□ -2.15
SMC6-208ENST00000481708 HCG22E2RYF7 251 aa1.64□□□□□ -2.15
SMC6-208ENST00000481708 H3BQ15 152 aa1.64□□□□□ -2.15
SMC6-208ENST00000481708 DEFB136Q30KP8 78 aa1.64□□□□□ -2.15
SMC6-208ENST00000481708 MED9Q9NWA0 146 aa1.64□□□□□ -2.15
SMC6-208ENST00000481708 IGKV3-7A0A075B6H7 116 aa1.63□□□□□ -2.15
SMC6-208ENST00000481708 ZNF818PQ6ZRF7 136 aa1.63□□□□□ -2.15
SMC6-208ENST00000481708 C5orf38Q86SI9 138 aa1.63□□□□□ -2.15
SMC6-208ENST00000481708 TMEM254Q8TBM7 123 aa1.63□□□□□ -2.15
SMC6-208ENST00000481708 AQP10Q96PS8 301 aa1.63□□□□□ -2.15
SMC6-208ENST00000481708 CBLN1P23435 193 aa1.63□□□□□ -2.15
SMC6-208ENST00000481708 IFI27L1Q96BM0 104 aa1.63□□□□□ -2.15
SMC6-208ENST00000481708 TMEM14BQ9NUH8 114 aa1.63□□□□□ -2.15
SMC6-208ENST00000481708 HILPDAQ9Y5L2 63 aa1.63□□□□□ -2.15
SMC6-208ENST00000481708 TEX49A0A1B0GTD5 131 aa1.63□□□□□ -2.15
SMC6-208ENST00000481708 Q5BKY6 102 aa1.63□□□□□ -2.15
SMC6-208ENST00000481708 NDUFA4L2Q9NRX3 87 aa1.63□□□□□ -2.15
SMC6-208ENST00000481708 UBE2L5PA0A1B0GUS4 154 aa1.62□□□□□ -2.15
SMC6-208ENST00000481708 UBE2L3P68036 154 aaKnown RBP1.62□□□□□ -2.15
SMC6-208ENST00000481708 CYTL1Q9NRR1 136 aa1.62□□□□□ -2.15
SMC6-208ENST00000481708 TRBV6-8A0A0A6YYG3 113 aa1.62□□□□□ -2.15
SMC6-208ENST00000481708 SH2D6Q7Z4S9 175 aa1.62□□□□□ -2.15
SMC6-208ENST00000481708 K7EIM0 57 aa1.61□□□□□ -2.15
SMC6-208ENST00000481708 SAA2P0DJI9 122 aaPredicted RBP1.61□□□□□ -2.15
SMC6-208ENST00000481708 KRTAP5-11Q6L8G4 156 aa1.61□□□□□ -2.15
SMC6-208ENST00000481708 LINC00052Q96N35 136 aa1.61□□□□□ -2.15
SMC6-208ENST00000481708 NBDYA0A0U1RRE5 68 aa1.61□□□□□ -2.15
SMC6-208ENST00000481708 KRTAP10-1P60331 282 aa1.61□□□□□ -2.15
SMC6-208ENST00000481708 CRCT1Q9UGL9 99 aa1.61□□□□□ -2.15
SMC6-208ENST00000481708 PPP1R1CQ8WVI7 109 aa1.61□□□□□ -2.15
SMC6-208ENST00000481708 FAM24AA6NFZ4 105 aa1.6□□□□□ -2.15
SMC6-208ENST00000481708 EDDM3BP56851 147 aa1.6□□□□□ -2.15
SMC6-208ENST00000481708 LINC00304Q8N9R0 145 aa1.6□□□□□ -2.15
SMC6-208ENST00000481708 PRCDQ00LT1 54 aa1.6□□□□□ -2.15
SMC6-208ENST00000481708 RNASE2P10153 161 aaKnown RBP1.59□□□□□ -2.15
SMC6-208ENST00000481708 Q5VV11 94 aa1.59□□□□□ -2.15
SMC6-208ENST00000481708 ALKAL2Q6UX46 152 aa1.59□□□□□ -2.15
SMC6-208ENST00000481708 MRPL35Q9NZE8 188 aaKnown RBP1.59□□□□□ -2.15
SMC6-208ENST00000481708 SIX6O95475 246 aa1.59□□□□□ -2.16
SMC6-208ENST00000481708 UBE2D1P51668 147 aa1.59□□□□□ -2.16
SMC6-208ENST00000481708 RPL39P5Q59GN2 51 aa1.59□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms