RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 A0A1B0GVX0 72 aa4.07□□□□□ -1.76
PRPF4B-205ENST00000480058 SPINK1P00995 79 aa4.07□□□□□ -1.76
PRPF4B-205ENST00000480058 C15orf56Q8N910 161 aa4.07□□□□□ -1.76
PRPF4B-205ENST00000480058 NBDYA0A0U1RRE5 68 aa4.07□□□□□ -1.76
PRPF4B-205ENST00000480058 C9orf163Q8N9P6 203 aa4.07□□□□□ -1.76
PRPF4B-205ENST00000480058 SPRR4Q96PI1 79 aa4.07□□□□□ -1.76
PRPF4B-205ENST00000480058 IGFL1Q6UW32 110 aa4.07□□□□□ -1.76
PRPF4B-205ENST00000480058 LY6G6CO95867 125 aa4.06□□□□□ -1.76
PRPF4B-205ENST00000480058 MDFIQ99750 246 aa4.06□□□□□ -1.76
PRPF4B-205ENST00000480058 NOTCH1P46531 2555 aa4.06□□□□□ -1.76
PRPF4B-205ENST00000480058 EXPH5Q8NEV8 1989 aa4.06□□□□□ -1.76
PRPF4B-205ENST00000480058 A0A1W2PNM2 257 aa4.06□□□□□ -1.76
PRPF4B-205ENST00000480058 M0R2N4 97 aa4.06□□□□□ -1.76
PRPF4B-205ENST00000480058 LINC00588Q9Y4M8 146 aa4.05□□□□□ -1.76
PRPF4B-205ENST00000480058 CNBPP62633 177 aaKnown RBP4.05□□□□□ -1.76
PRPF4B-205ENST00000480058 MIR22HGQ0VDD5 57 aa4.05□□□□□ -1.76
PRPF4B-205ENST00000480058 FLG2Q5D862 2391 aaPredicted RBP4.04□□□□□ -1.76
PRPF4B-205ENST00000480058 UNC79Q9P2D8 2635 aa4.04□□□□□ -1.76
PRPF4B-205ENST00000480058 GIG44P09565 113 aaPredicted RBP4.04□□□□□ -1.76
PRPF4B-205ENST00000480058 PTPRBP23467 1997 aa4.03□□□□□ -1.76
PRPF4B-205ENST00000480058 ZNF861PO60384 105 aa4.03□□□□□ -1.76
PRPF4B-205ENST00000480058 COL4A2P08572 1712 aa4.03□□□□□ -1.76
PRPF4B-205ENST00000480058 A0A096LNT2 108 aa4.03□□□□□ -1.77
PRPF4B-205ENST00000480058 FLNAP21333 2647 aaKnown RBP4.02□□□□□ -1.77
PRPF4B-205ENST00000480058 IGLV7-46A0A075B6I9 117 aa4.02□□□□□ -1.77
PRPF4B-205ENST00000480058 PRRC2CQ9Y520 2896 aaKnown RBP4.02□□□□□ -1.77
PRPF4B-205ENST00000480058 CENPEQ02224 2701 aa4.02□□□□□ -1.77
PRPF4B-205ENST00000480058 ZNF575Q86XF7 245 aa4.01□□□□□ -1.77
PRPF4B-205ENST00000480058 SPACA4Q8TDM5 124 aa4.01□□□□□ -1.77
PRPF4B-205ENST00000480058 PHF5AQ7RTV0 110 aaKnown RBP4.01□□□□□ -1.77
PRPF4B-205ENST00000480058 HELZ2Q9BYK8 2649 aaKnown RBP4.01□□□□□ -1.77
PRPF4B-205ENST00000480058 CRIPTQ9P021 101 aa4□□□□□ -1.77
PRPF4B-205ENST00000480058 SPRR1BP22528 89 aa4□□□□□ -1.77
PRPF4B-205ENST00000480058 Q75L30 129 aa4□□□□□ -1.77
PRPF4B-205ENST00000480058 LINC01558Q9Y6Z2 57 aa4□□□□□ -1.77
PRPF4B-205ENST00000480058 ASB16-AS1Q495Z4 193 aa4□□□□□ -1.77
PRPF4B-205ENST00000480058 RAI1Q7Z5J4 1906 aaPredicted RBP3.99□□□□□ -1.77
PRPF4B-205ENST00000480058 C9orf129Q5T035 196 aaKnown RBP3.99□□□□□ -1.77
PRPF4B-205ENST00000480058 IGLV8-61A0A075B6I0 122 aa3.99□□□□□ -1.77
PRPF4B-205ENST00000480058 TEP1Q99973 2627 aaKnown RBP3.99□□□□□ -1.77
PRPF4B-205ENST00000480058 RTL8CO15255 209 aa3.99□□□□□ -1.77
PRPF4B-205ENST00000480058 SPRR1AP35321 89 aa3.99□□□□□ -1.77
PRPF4B-205ENST00000480058 TYMSOSQ8TAI1 123 aa3.99□□□□□ -1.77
PRPF4B-205ENST00000480058 AKAP13Q12802 2813 aa3.99□□□□□ -1.77
PRPF4B-205ENST00000480058 FAM104AQ969W3 186 aa3.99□□□□□ -1.77
PRPF4B-205ENST00000480058 DSCR10P59022 87 aa3.97□□□□□ -1.77
PRPF4B-205ENST00000480058 Q8N9P0 234 aaPredicted RBP3.97□□□□□ -1.77
PRPF4B-205ENST00000480058 SMR3AQ99954 134 aa3.97□□□□□ -1.77
PRPF4B-205ENST00000480058 ITPR3Q14573 2671 aa3.97□□□□□ -1.77
PRPF4B-205ENST00000480058 STAB2Q8WWQ8 2551 aa3.95□□□□□ -1.78
PRPF4B-205ENST00000480058 COL6A5A8TX70 2615 aa3.95□□□□□ -1.78
PRPF4B-205ENST00000480058 SETXQ7Z333 2677 aaKnown RBP3.94□□□□□ -1.78
PRPF4B-205ENST00000480058 Q5XG85 94 aa3.94□□□□□ -1.78
PRPF4B-205ENST00000480058 FAM229BQ4G0N7 80 aa3.94□□□□□ -1.78
PRPF4B-205ENST00000480058 KRTAP24-1Q3LI83 254 aa3.94□□□□□ -1.78
PRPF4B-205ENST00000480058 SPINT4Q6UDR6 99 aa3.94□□□□□ -1.78
PRPF4B-205ENST00000480058 FP248Q71RG6 208 aaPredicted RBP3.94□□□□□ -1.78
PRPF4B-205ENST00000480058 LINC01554Q52M75 96 aa3.93□□□□□ -1.78
PRPF4B-205ENST00000480058 Q96NJ1 140 aa3.93□□□□□ -1.78
PRPF4B-205ENST00000480058 LAMA2P24043 3122 aaKnown RBP3.93□□□□□ -1.78
PRPF4B-205ENST00000480058 CHTF8P0CG12 524 aa3.93□□□□□ -1.78
PRPF4B-205ENST00000480058 PLA2G1BP04054 148 aaKnown RBP3.92□□□□□ -1.78
PRPF4B-205ENST00000480058 IGLV7-43P04211 117 aa3.92□□□□□ -1.78
PRPF4B-205ENST00000480058 TNP2Q05952 138 aa3.92□□□□□ -1.78
PRPF4B-205ENST00000480058 A0A087WTM6 91 aa3.92□□□□□ -1.78
PRPF4B-205ENST00000480058 BAHCC1Q9P281 2608 aa3.92□□□□□ -1.78
PRPF4B-205ENST00000480058 WWC2-AS2Q96NR7 200 aa3.92□□□□□ -1.78
PRPF4B-205ENST00000480058 LINC00304Q8N9R0 145 aa3.92□□□□□ -1.78
PRPF4B-205ENST00000480058 FAM168BA1KXE4 195 aa3.91□□□□□ -1.78
PRPF4B-205ENST00000480058 PRR26Q8N8Z3 221 aa3.91□□□□□ -1.78
PRPF4B-205ENST00000480058 DMBT1Q9UGM3 2413 aaPredicted RBP3.91□□□□□ -1.78
PRPF4B-205ENST00000480058 CENPFP49454 3210 aa3.9□□□□□ -1.78
PRPF4B-205ENST00000480058 RBM12B-AS1Q9P1G2 102 aa3.9□□□□□ -1.79
PRPF4B-205ENST00000480058 MMP24-AS1A0A0U1RRL7 71 aa3.9□□□□□ -1.79
PRPF4B-205ENST00000480058 LINC00472Q9H8W2 130 aa3.89□□□□□ -1.79
PRPF4B-205ENST00000480058 PSORS1C2Q9UIG4 136 aa3.88□□□□□ -1.79
PRPF4B-205ENST00000480058 CHD6Q8TD26 2715 aa3.88□□□□□ -1.79
PRPF4B-205ENST00000480058 CFAP46Q8IYW2 2715 aa3.88□□□□□ -1.79
PRPF4B-205ENST00000480058 A0A087X002 238 aa3.88□□□□□ -1.79
PRPF4B-205ENST00000480058 NSD1Q96L73 2696 aaPredicted RBP3.87□□□□□ -1.79
PRPF4B-205ENST00000480058 A0A1W2PNN7 141 aa3.87□□□□□ -1.79
PRPF4B-205ENST00000480058 DMAC1Q96GE9 116 aa3.87□□□□□ -1.79
PRPF4B-205ENST00000480058 MAP1AP78559 2803 aaPredicted RBP3.87□□□□□ -1.79
PRPF4B-205ENST00000480058 A0A1B0GU33 70 aa3.87□□□□□ -1.79
PRPF4B-205ENST00000480058 K7EIL1 84 aa3.87□□□□□ -1.79
PRPF4B-205ENST00000480058 LUZP6Q538Z0 58 aa3.87□□□□□ -1.79
PRPF4B-205ENST00000480058 BPTFQ12830 3046 aa3.86□□□□□ -1.79
PRPF4B-205ENST00000480058 HRES1P13985 223 aa3.86□□□□□ -1.79
PRPF4B-205ENST00000480058 APLNQ9ULZ1 77 aa3.86□□□□□ -1.79
PRPF4B-205ENST00000480058 GCN1Q92616 2671 aaKnown RBP3.86□□□□□ -1.79
PRPF4B-205ENST00000480058 Q5VV11 94 aa3.86□□□□□ -1.79
PRPF4B-205ENST00000480058 ZCCHC13Q8WW36 166 aaKnown RBP3.85□□□□□ -1.79
PRPF4B-205ENST00000480058 CR1P17927 2039 aa3.85□□□□□ -1.79
PRPF4B-205ENST00000480058 COL27A1Q8IZC6 1860 aaPredicted RBP3.85□□□□□ -1.79
PRPF4B-205ENST00000480058 TRIOO75962 3097 aa3.84□□□□□ -1.79
PRPF4B-205ENST00000480058 ZNF292O60281 2723 aa3.84□□□□□ -1.8
PRPF4B-205ENST00000480058 PCSK5Q92824 1860 aa3.83□□□□□ -1.8
PRPF4B-205ENST00000480058 PLAC8Q9NZF1 115 aa3.82□□□□□ -1.8
PRPF4B-205ENST00000480058 LCE6AA0A183 80 aa3.82□□□□□ -1.8
PRPF4B-205ENST00000480058 KRTAP1-1Q07627 177 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms