RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 SMIM11BQ8TCY0 68 aa8.08□□□□□ -1.12
CHD3-210ENST00000479080 TMEM126AQ9H061 195 aa8.08□□□□□ -1.12
CHD3-210ENST00000479080 PSORS1C2Q9UIG4 136 aa8.08□□□□□ -1.12
CHD3-210ENST00000479080 TRAV23DV6A0A075B6W5 121 aa8.07□□□□□ -1.12
CHD3-210ENST00000479080 PRYO14603 147 aa8.07□□□□□ -1.12
CHD3-210ENST00000479080 UBE2BP63146 152 aa8.07□□□□□ -1.12
CHD3-210ENST00000479080 RAB37Q96AX2 223 aa8.07□□□□□ -1.12
CHD3-210ENST00000479080 PRO1854Q9UHT4 67 aa8.07□□□□□ -1.12
CHD3-210ENST00000479080 TSPAN13O95857 204 aa8.06□□□□□ -1.12
CHD3-210ENST00000479080 LINC00528Q8N1L1 170 aa8.06□□□□□ -1.12
CHD3-210ENST00000479080 H7C2G1 150 aa8.05□□□□□ -1.12
CHD3-210ENST00000479080 TAX1BP3O14907 124 aa8.05□□□□□ -1.12
CHD3-210ENST00000479080 KRTAP13-1Q8IUC0 172 aa8.05□□□□□ -1.12
CHD3-210ENST00000479080 C6orf99Q4VX62 202 aa8.04□□□□□ -1.12
CHD3-210ENST00000479080 REG3GQ6UW15 175 aa8.04□□□□□ -1.12
CHD3-210ENST00000479080 ZNF73O43830 326 aaPredicted RBP8.03□□□□□ -1.12
CHD3-210ENST00000479080 RPL28P46779 137 aaKnown RBP8.03□□□□□ -1.12
CHD3-210ENST00000479080 NAA38Q9BRA0 125 aaKnown RBP8.03□□□□□ -1.12
CHD3-210ENST00000479080 ABCA13Q86UQ4 5058 aa8.02□□□□□ -1.13
CHD3-210ENST00000479080 B5MCH6 92 aa8.02□□□□□ -1.13
CHD3-210ENST00000479080 TRIAP1O43715 76 aa8.02□□□□□ -1.13
CHD3-210ENST00000479080 BCE1O60756 84 aa8.02□□□□□ -1.13
CHD3-210ENST00000479080 C1orf137Q5JT78 98 aa8.01□□□□□ -1.13
CHD3-210ENST00000479080 DIRC1Q969H9 104 aa8.01□□□□□ -1.13
CHD3-210ENST00000479080 RPL37AP61513 92 aaKnown RBP8□□□□□ -1.13
CHD3-210ENST00000479080 PRLHP81277 87 aa8□□□□□ -1.13
CHD3-210ENST00000479080 ELOF1P60002 83 aaKnown RBP7.99□□□□□ -1.13
CHD3-210ENST00000479080 Q1RN00 199 aa7.99□□□□□ -1.13
CHD3-210ENST00000479080 FAM19A1Q7Z5A9 133 aa7.99□□□□□ -1.13
CHD3-210ENST00000479080 Q9BRP9 147 aa7.99□□□□□ -1.13
CHD3-210ENST00000479080 IGLV7-43P04211 117 aa7.98□□□□□ -1.13
CHD3-210ENST00000479080 SMCR5Q8TEV8 140 aa7.98□□□□□ -1.13
CHD3-210ENST00000479080 FAM218AQ96MZ4 157 aa7.98□□□□□ -1.13
CHD3-210ENST00000479080 ETDCA0A1B0GVM5 59 aa7.97□□□□□ -1.13
CHD3-210ENST00000479080 ERC2-IT1O76042 136 aa7.97□□□□□ -1.13
CHD3-210ENST00000479080 COL5A1-AS1Q5SY13 56 aa7.97□□□□□ -1.13
CHD3-210ENST00000479080 Q6ZRX8 168 aa7.97□□□□□ -1.13
CHD3-210ENST00000479080 TRBV7-6A0A0J9YX20 115 aa7.96□□□□□ -1.14
CHD3-210ENST00000479080 COX7BP24311 80 aa7.96□□□□□ -1.14
CHD3-210ENST00000479080 Q5VSD8 79 aa7.96□□□□□ -1.14
CHD3-210ENST00000479080 C9orf118A6NHY6 69 aa7.95□□□□□ -1.14
CHD3-210ENST00000479080 H0Y9J4 135 aa7.95□□□□□ -1.14
CHD3-210ENST00000479080 H3BUT2 72 aa7.95□□□□□ -1.14
CHD3-210ENST00000479080 Q8N1X5 172 aa7.95□□□□□ -1.14
CHD3-210ENST00000479080 KRTAP4-5Q9BYR2 181 aa7.95□□□□□ -1.14
CHD3-210ENST00000479080 CBY1Q9Y3M2 126 aa7.95□□□□□ -1.14
CHD3-210ENST00000479080 ZNF861PO60384 105 aa7.94□□□□□ -1.14
CHD3-210ENST00000479080 CLEC2BQ92478 149 aa7.94□□□□□ -1.14
CHD3-210ENST00000479080 FAT3Q8TDW7 4589 aa7.94□□□□□ -1.14
CHD3-210ENST00000479080 UBE2AP49459 152 aa7.93□□□□□ -1.14
CHD3-210ENST00000479080 LINC00575Q6W349 94 aa7.93□□□□□ -1.14
CHD3-210ENST00000479080 PSMB2P49721 201 aa7.92□□□□□ -1.14
CHD3-210ENST00000479080 A0A1W2PPM0 123 aa7.91□□□□□ -1.14
CHD3-210ENST00000479080 HIGD2AQ9BW72 106 aa7.91□□□□□ -1.14
CHD3-210ENST00000479080 FAM229AH3BQW9 127 aa7.9□□□□□ -1.14
CHD3-210ENST00000479080 ST20-AS1Q8NBB2 130 aa7.9□□□□□ -1.14
CHD3-210ENST00000479080 LRP1Q07954 4544 aaKnown RBP7.89□□□□□ -1.15
CHD3-210ENST00000479080 H0YGX0 51 aa7.89□□□□□ -1.15
CHD3-210ENST00000479080 TCL1BO95988 128 aa7.89□□□□□ -1.15
CHD3-210ENST00000479080 LINC01547P58512 204 aaPredicted RBP7.89□□□□□ -1.15
CHD3-210ENST00000479080 SRRM2Q9UQ35 2752 aaKnown RBP7.89□□□□□ -1.15
CHD3-210ENST00000479080 LST1O00453 97 aa7.88□□□□□ -1.15
CHD3-210ENST00000479080 PLA2G1BP04054 148 aaKnown RBP7.88□□□□□ -1.15
CHD3-210ENST00000479080 INAFM2P0DMQ5 153 aa7.88□□□□□ -1.15
CHD3-210ENST00000479080 VAMP3Q15836 100 aa7.88□□□□□ -1.15
CHD3-210ENST00000479080 hADV29S1A0JD25 119 aa7.87□□□□□ -1.15
CHD3-210ENST00000479080 KRTAP1-4P0C5Y4 121 aa7.87□□□□□ -1.15
CHD3-210ENST00000479080 DHRS4-AS1Q9P1J3 65 aa7.87□□□□□ -1.15
CHD3-210ENST00000479080 COX6CP09669 75 aa7.85□□□□□ -1.15
CHD3-210ENST00000479080 SCGB1C2P0DMR2 95 aa7.85□□□□□ -1.15
CHD3-210ENST00000479080 SPINK6Q6UWN8 80 aa7.85□□□□□ -1.15
CHD3-210ENST00000479080 Q6ZQY7 126 aa7.85□□□□□ -1.15
CHD3-210ENST00000479080 SPRR4Q96PI1 79 aa7.85□□□□□ -1.15
CHD3-210ENST00000479080 MYCBP2O75592 4640 aa7.85□□□□□ -1.15
CHD3-210ENST00000479080 IGLV5-48A0A075B6I7 105 aa7.83□□□□□ -1.16
CHD3-210ENST00000479080 A0A1B0GX51 115 aa7.83□□□□□ -1.16
CHD3-210ENST00000479080 TRACP01848 142 aa7.83□□□□□ -1.16
CHD3-210ENST00000479080 FABP2P12104 132 aa7.83□□□□□ -1.16
CHD3-210ENST00000479080 ANAPC11Q9NYG5 84 aa7.83□□□□□ -1.16
CHD3-210ENST00000479080 Q8N377 158 aa7.82□□□□□ -1.16
CHD3-210ENST00000479080 SPCS1Q9Y6A9 102 aa7.82□□□□□ -1.16
CHD3-210ENST00000479080 TNXBP22105 4242 aa7.82□□□□□ -1.16
CHD3-210ENST00000479080 K7EP34 96 aa7.81□□□□□ -1.16
CHD3-210ENST00000479080 SPRR1BP22528 89 aa7.81□□□□□ -1.16
CHD3-210ENST00000479080 ATXN8Q156A1 80 aa7.81□□□□□ -1.16
CHD3-210ENST00000479080 LINC00483Q53H64 154 aa7.81□□□□□ -1.16
CHD3-210ENST00000479080 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.81□□□□□ -1.16
CHD3-210ENST00000479080 A0A1B0GV90 55 aa7.8□□□□□ -1.16
CHD3-210ENST00000479080 SLC25A20O43772 301 aa7.8□□□□□ -1.16
CHD3-210ENST00000479080 LYRM7Q5U5X0 104 aa7.8□□□□□ -1.16
CHD3-210ENST00000479080 SMIM29Q86T20 159 aa7.8□□□□□ -1.16
CHD3-210ENST00000479080 TRBV20-1A0A075B6N2 111 aa7.79□□□□□ -1.16
CHD3-210ENST00000479080 H3BMG7 143 aa7.79□□□□□ -1.16
CHD3-210ENST00000479080 GAGE2AQ6NT46 116 aa7.79□□□□□ -1.16
CHD3-210ENST00000479080 A0A087X002 238 aa7.78□□□□□ -1.16
CHD3-210ENST00000479080 MTURNQ8N3F0 131 aa7.78□□□□□ -1.16
CHD3-210ENST00000479080 C3orf22Q8N5N4 141 aa7.78□□□□□ -1.16
CHD3-210ENST00000479080 DEFB105AQ8NG35 78 aa7.78□□□□□ -1.16
CHD3-210ENST00000479080 KRTAP13-2Q52LG2 175 aa7.77□□□□□ -1.17
CHD3-210ENST00000479080 PRO0461Q9UI25 63 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms