RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 MYO18BQ8IUG5 2567 aa13.94□□□□□ -0.18
SDF4-206ENST00000478938 GCN1Q92616 2671 aaKnown RBP13.93□□□□□ -0.18
SDF4-206ENST00000478938 C11orf45Q8TAV5 145 aa13.93□□□□□ -0.18
SDF4-206ENST00000478938 USP9XQ93008 2570 aaPredicted RBP13.93□□□□□ -0.18
SDF4-206ENST00000478938 A6NN06 94 aa13.92□□□□□ -0.18
SDF4-206ENST00000478938 Q8N377 158 aa13.92□□□□□ -0.18
SDF4-206ENST00000478938 SETD2Q9BYW2 2564 aaPredicted RBP13.91□□□□□ -0.18
SDF4-206ENST00000478938 ATP11AUNQ6ZP68 121 aa13.9□□□□□ -0.18
SDF4-206ENST00000478938 PRO0255Q9UI72 69 aa13.9□□□□□ -0.18
SDF4-206ENST00000478938 TEX15Q9BXT5 2789 aa13.9□□□□□ -0.18
SDF4-206ENST00000478938 NDUFB1O75438 58 aa13.9□□□□□ -0.18
SDF4-206ENST00000478938 LIMD2Q9BT23 127 aa13.9□□□□□ -0.18
SDF4-206ENST00000478938 SONP18583 2426 aaKnown RBP13.9□□□□□ -0.18
SDF4-206ENST00000478938 IGLV5-48A0A075B6I7 105 aa13.89□□□□□ -0.19
SDF4-206ENST00000478938 GVQW2A0A096LPI5 108 aaPredicted RBP13.89□□□□□ -0.19
SDF4-206ENST00000478938 NDUFS5O43920 106 aa13.89□□□□□ -0.19
SDF4-206ENST00000478938 DEFB116Q30KQ4 102 aa13.89□□□□□ -0.19
SDF4-206ENST00000478938 APOC4P55056 127 aa13.88□□□□□ -0.19
SDF4-206ENST00000478938 A6NED7 52 aa13.88□□□□□ -0.19
SDF4-206ENST00000478938 FAM208BQ5VWN6 2430 aa13.88□□□□□ -0.19
SDF4-206ENST00000478938 LINC00208Q96KT6 92 aa13.87□□□□□ -0.19
SDF4-206ENST00000478938 C4orf48Q5BLP8 95 aa13.85□□□□□ -0.19
SDF4-206ENST00000478938 PHF5AQ7RTV0 110 aaKnown RBP13.85□□□□□ -0.19
SDF4-206ENST00000478938 NF1P21359 2839 aa13.85□□□□□ -0.19
SDF4-206ENST00000478938 C19orf73Q9NVV2 129 aa13.85□□□□□ -0.19
SDF4-206ENST00000478938 ZNF462Q96JM2 2506 aa13.83□□□□□ -0.19
SDF4-206ENST00000478938 DSCR9P59020 149 aa13.83□□□□□ -0.2
SDF4-206ENST00000478938 C1orf137Q5JT78 98 aa13.82□□□□□ -0.2
SDF4-206ENST00000478938 Q75L30 129 aa13.81□□□□□ -0.2
SDF4-206ENST00000478938 POLQO75417 2590 aa13.81□□□□□ -0.2
SDF4-206ENST00000478938 MP68P56378 58 aa13.81□□□□□ -0.2
SDF4-206ENST00000478938 WFDC13Q8IUB5 93 aa13.81□□□□□ -0.2
SDF4-206ENST00000478938 Q8NBF4 154 aa13.8□□□□□ -0.2
SDF4-206ENST00000478938 KCNQ1DNQ9H478 68 aa13.78□□□□□ -0.2
SDF4-206ENST00000478938 LRRK2Q5S007 2527 aa13.78□□□□□ -0.2
SDF4-206ENST00000478938 C7orf65Q6ZTY9 151 aa13.77□□□□□ -0.21
SDF4-206ENST00000478938 CAMK2N2Q96S95 79 aa13.77□□□□□ -0.21
SDF4-206ENST00000478938 DOPEY1Q5JWR5 2465 aa13.76□□□□□ -0.21
SDF4-206ENST00000478938 A0A1B0GW54 56 aa13.75□□□□□ -0.21
SDF4-206ENST00000478938 Q9BRP9 147 aa13.75□□□□□ -0.21
SDF4-206ENST00000478938 J3QKU1 62 aa13.75□□□□□ -0.21
SDF4-206ENST00000478938 DEFB4AO15263 64 aa13.74□□□□□ -0.21
SDF4-206ENST00000478938 WFDC10BQ8IUB3 73 aa13.74□□□□□ -0.21
SDF4-206ENST00000478938 NAV2Q8IVL1 2488 aa13.74□□□□□ -0.21
SDF4-206ENST00000478938 FSHBP01225 129 aa13.74□□□□□ -0.21
SDF4-206ENST00000478938 CMC4P56277 68 aaPredicted RBP13.74□□□□□ -0.21
SDF4-206ENST00000478938 DNAJC9-AS1A6NH13 148 aa13.73□□□□□ -0.21
SDF4-206ENST00000478938 TNP2Q05952 138 aa13.73□□□□□ -0.21
SDF4-206ENST00000478938 CDC42SE1Q9NRR8 79 aa13.73□□□□□ -0.21
SDF4-206ENST00000478938 SPANXA2-OT1Q8N9U9 137 aa13.72□□□□□ -0.21
SDF4-206ENST00000478938 SPRR4Q96PI1 79 aa13.72□□□□□ -0.21
SDF4-206ENST00000478938 UBR5O95071 2799 aaPredicted RBP13.72□□□□□ -0.21
SDF4-206ENST00000478938 ANKRD17O75179 2603 aaKnown RBP13.72□□□□□ -0.21
SDF4-206ENST00000478938 PRR34Q9NV39 138 aa13.72□□□□□ -0.21
SDF4-206ENST00000478938 LOC101927531A0A1B0GV80 90 aa13.71□□□□□ -0.21
SDF4-206ENST00000478938 C8orf87E5RJ46 101 aa13.71□□□□□ -0.22
SDF4-206ENST00000478938 MOBPQ13875 183 aa13.71□□□□□ -0.22
SDF4-206ENST00000478938 C7orf33Q8WU49 177 aa13.69□□□□□ -0.22
SDF4-206ENST00000478938 X6R8D5 127 aa13.69□□□□□ -0.22
SDF4-206ENST00000478938 A0A0G2JQZ4 141 aa13.69□□□□□ -0.22
SDF4-206ENST00000478938 A0A1W2PNN7 141 aa13.69□□□□□ -0.22
SDF4-206ENST00000478938 H0Y9P7 68 aa13.69□□□□□ -0.22
SDF4-206ENST00000478938 EGFEM1PQ0D2K5 195 aa13.69□□□□□ -0.22
SDF4-206ENST00000478938 COA5Q86WW8 74 aa13.67□□□□□ -0.22
SDF4-206ENST00000478938 ABCA12Q86UK0 2595 aa13.66□□□□□ -0.22
SDF4-206ENST00000478938 IGLV1-51P01701 117 aa13.66□□□□□ -0.22
SDF4-206ENST00000478938 IGKV2D-24A0A075B6R9 120 aa13.65□□□□□ -0.22
SDF4-206ENST00000478938 SERTAD4-AS1Q5TG53 156 aa13.63□□□□□ -0.23
SDF4-206ENST00000478938 NKAPP1Q8N9T2 125 aa13.62□□□□□ -0.23
SDF4-206ENST00000478938 OTOGQ6ZRI0 2925 aa13.62□□□□□ -0.23
SDF4-206ENST00000478938 LELP1Q5T871 98 aa13.62□□□□□ -0.23
SDF4-206ENST00000478938 RPL37AP61513 92 aaKnown RBP13.61□□□□□ -0.23
SDF4-206ENST00000478938 Q6ZRX8 168 aa13.61□□□□□ -0.23
SDF4-206ENST00000478938 RPL37AP8A6NKH3 93 aa13.6□□□□□ -0.23
SDF4-206ENST00000478938 HTN3P15516 51 aa13.6□□□□□ -0.23
SDF4-206ENST00000478938 DHRS4-AS1Q9P1J3 65 aa13.6□□□□□ -0.23
SDF4-206ENST00000478938 C9orf163Q8N9P6 203 aa13.59□□□□□ -0.23
SDF4-206ENST00000478938 KRTAP29-1A8MX34 341 aaPredicted RBP13.56□□□□□ -0.24
SDF4-206ENST00000478938 SPAG11AQ6PDA7 123 aa13.56□□□□□ -0.24
SDF4-206ENST00000478938 C15orf56Q8N910 161 aa13.56□□□□□ -0.24
SDF4-206ENST00000478938 ZNF469Q96JG9 3925 aaPredicted RBP13.55□□□□□ -0.24
SDF4-206ENST00000478938 SPINK7P58062 85 aa13.55□□□□□ -0.24
SDF4-206ENST00000478938 LINC00476Q8WZB0 136 aa13.54□□□□□ -0.24
SDF4-206ENST00000478938 TENM4Q6N022 2769 aa13.54□□□□□ -0.24
SDF4-206ENST00000478938 PRAC1Q96KF2 57 aa13.52□□□□□ -0.24
SDF4-206ENST00000478938 H3BPC8 53 aa13.52□□□□□ -0.25
SDF4-206ENST00000478938 F8P00451 2351 aa13.51□□□□□ -0.25
SDF4-206ENST00000478938 KRTAP4-16G5E9R7 235 aaPredicted RBP13.51□□□□□ -0.25
SDF4-206ENST00000478938 CASC2Q6XLA1 102 aa13.51□□□□□ -0.25
SDF4-206ENST00000478938 H3BS24 57 aa13.5□□□□□ -0.25
SDF4-206ENST00000478938 HELZ2Q9BYK8 2649 aaKnown RBP13.5□□□□□ -0.25
SDF4-206ENST00000478938 DEFB135Q30KP9 77 aa13.49□□□□□ -0.25
SDF4-206ENST00000478938 KRTAP26-1Q6PEX3 210 aa13.49□□□□□ -0.25
SDF4-206ENST00000478938 A0A087WSZ3 146 aa13.49□□□□□ -0.25
SDF4-206ENST00000478938 LINC01558Q9Y6Z2 57 aa13.48□□□□□ -0.25
SDF4-206ENST00000478938 LINC00313P59037 77 aa13.48□□□□□ -0.25
SDF4-206ENST00000478938 IGFL1Q6UW32 110 aa13.47□□□□□ -0.25
SDF4-206ENST00000478938 PLAC8Q9NZF1 115 aa13.47□□□□□ -0.25
SDF4-206ENST00000478938 FAM168BA1KXE4 195 aa13.46□□□□□ -0.25
SDF4-206ENST00000478938 KRTAP10-9P60411 292 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms