RNA–Protein interactions for RNA: ENST00000478620.2

COL19A1-203, Transcript of collagen type XIX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL19A1, Length 589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL19A1-203ENST00000478620 SPRR1AP35321 89 aa12.54□□□□□ -0.4
COL19A1-203ENST00000478620 LINC00518Q8N0U6 118 aa12.54□□□□□ -0.4
COL19A1-203ENST00000478620 CBY1Q9Y3M2 126 aa12.54□□□□□ -0.4
COL19A1-203ENST00000478620 TRAV23DV6A0A075B6W5 121 aa12.53□□□□□ -0.4
COL19A1-203ENST00000478620 MUSTN1Q8IVN3 82 aa12.53□□□□□ -0.4
COL19A1-203ENST00000478620 RPL13AP40429 203 aaKnown RBP12.52□□□□□ -0.41
COL19A1-203ENST00000478620 CRYGAP11844 174 aa12.5□□□□□ -0.41
COL19A1-203ENST00000478620 ANAPC11Q9NYG5 84 aa12.5□□□□□ -0.41
COL19A1-203ENST00000478620 HERC1Q15751 4861 aa12.5□□□□□ -0.41
COL19A1-203ENST00000478620 KRTAP4-16G5E9R7 235 aaPredicted RBP12.49□□□□□ -0.41
COL19A1-203ENST00000478620 HINT1P49773 126 aaPredicted RBP12.49□□□□□ -0.41
COL19A1-203ENST00000478620 SMCR5Q8TEV8 140 aa12.49□□□□□ -0.41
COL19A1-203ENST00000478620 B5MCH6 92 aa12.48□□□□□ -0.41
COL19A1-203ENST00000478620 ZNF73O43830 326 aaPredicted RBP12.48□□□□□ -0.41
COL19A1-203ENST00000478620 JOSD1Q15040 202 aaPredicted RBP12.48□□□□□ -0.41
COL19A1-203ENST00000478620 PAM16Q9Y3D7 125 aa12.48□□□□□ -0.41
COL19A1-203ENST00000478620 COX8AP10176 69 aa12.47□□□□□ -0.41
COL19A1-203ENST00000478620 VAMP8Q9BV40 100 aa12.47□□□□□ -0.41
COL19A1-203ENST00000478620 A6NDN8 102 aa12.46□□□□□ -0.41
COL19A1-203ENST00000478620 SPATA45Q537H7 98 aa12.46□□□□□ -0.41
COL19A1-203ENST00000478620 PPDPFQ9H3Y8 114 aa12.46□□□□□ -0.41
COL19A1-203ENST00000478620 ZNF706Q9Y5V0 76 aaPredicted RBP12.46□□□□□ -0.41
COL19A1-203ENST00000478620 SMCPP49901 116 aaPredicted RBP12.44□□□□□ -0.42
COL19A1-203ENST00000478620 TYMSOSQ8TAI1 123 aa12.44□□□□□ -0.42
COL19A1-203ENST00000478620 C14orf144Q96I85 54 aa12.44□□□□□ -0.42
COL19A1-203ENST00000478620 A0A087X002 238 aa12.43□□□□□ -0.42
COL19A1-203ENST00000478620 FAM229BQ4G0N7 80 aa12.43□□□□□ -0.42
COL19A1-203ENST00000478620 Q6ZRX8 168 aa12.43□□□□□ -0.42
COL19A1-203ENST00000478620 DLEU1O43261 78 aa12.41□□□□□ -0.42
COL19A1-203ENST00000478620 SPRR4Q96PI1 79 aa12.41□□□□□ -0.42
COL19A1-203ENST00000478620 HIST1H4GQ99525 98 aa12.41□□□□□ -0.42
COL19A1-203ENST00000478620 TNXBP22105 4242 aa12.39□□□□□ -0.43
COL19A1-203ENST00000478620 TRAV13-2A0A0B4J235 113 aa12.39□□□□□ -0.43
COL19A1-203ENST00000478620 SLC25A34Q6PIV7 304 aa12.38□□□□□ -0.43
COL19A1-203ENST00000478620 Q9BRP9 147 aa12.38□□□□□ -0.43
COL19A1-203ENST00000478620 ERC2-IT1O76042 136 aa12.37□□□□□ -0.43
COL19A1-203ENST00000478620 C6orf99Q4VX62 202 aa12.37□□□□□ -0.43
COL19A1-203ENST00000478620 GAGE2AQ6NT46 116 aa12.37□□□□□ -0.43
COL19A1-203ENST00000478620 A4D1N5 150 aa12.36□□□□□ -0.43
COL19A1-203ENST00000478620 COX7BP24311 80 aa12.36□□□□□ -0.43
COL19A1-203ENST00000478620 PYY3Q5JQD4 70 aa12.36□□□□□ -0.43
COL19A1-203ENST00000478620 KRTAP13-2Q52LG2 175 aa12.35□□□□□ -0.43
COL19A1-203ENST00000478620 DHRS4-AS1Q9P1J3 65 aa12.33□□□□□ -0.44
COL19A1-203ENST00000478620 TSPAN13O95857 204 aa12.31□□□□□ -0.44
COL19A1-203ENST00000478620 C3orf22Q8N5N4 141 aa12.31□□□□□ -0.44
COL19A1-203ENST00000478620 HIGD1BQ9P298 99 aa12.31□□□□□ -0.44
COL19A1-203ENST00000478620 ELOF1P60002 83 aaKnown RBP12.3□□□□□ -0.44
COL19A1-203ENST00000478620 SMIM11BQ8TCY0 68 aa12.29□□□□□ -0.44
COL19A1-203ENST00000478620 C12orf57Q99622 126 aa12.29□□□□□ -0.44
COL19A1-203ENST00000478620 TRBV7-6A0A0J9YX20 115 aa12.28□□□□□ -0.44
COL19A1-203ENST00000478620 A0A1B0GWB2 263 aa12.28□□□□□ -0.44
COL19A1-203ENST00000478620 LINC00483Q53H64 154 aa12.28□□□□□ -0.44
COL19A1-203ENST00000478620 VAMP3Q15836 100 aa12.27□□□□□ -0.45
COL19A1-203ENST00000478620 LINC00304Q8N9R0 145 aa12.27□□□□□ -0.45
COL19A1-203ENST00000478620 ST20-AS1Q8NBB2 130 aa12.27□□□□□ -0.45
COL19A1-203ENST00000478620 C2orf91Q6ZV80 131 aa12.25□□□□□ -0.45
COL19A1-203ENST00000478620 IGLV9-49A0A0B4J1Y8 123 aa12.24□□□□□ -0.45
COL19A1-203ENST00000478620 TAL2Q16559 108 aa12.23□□□□□ -0.45
COL19A1-203ENST00000478620 RAB37Q96AX2 223 aa12.23□□□□□ -0.45
COL19A1-203ENST00000478620 DEFB105AQ8NG35 78 aa12.22□□□□□ -0.45
COL19A1-203ENST00000478620 H7C2G1 150 aa12.2□□□□□ -0.46
COL19A1-203ENST00000478620 SLC25A20O43772 301 aa12.2□□□□□ -0.46
COL19A1-203ENST00000478620 CEND1Q8N111 149 aa12.2□□□□□ -0.46
COL19A1-203ENST00000478620 NHP2Q9NX24 153 aaKnown RBP12.2□□□□□ -0.46
COL19A1-203ENST00000478620 CFC1BP0CG36 223 aa12.19□□□□□ -0.46
COL19A1-203ENST00000478620 CFC1P0CG37 223 aa12.19□□□□□ -0.46
COL19A1-203ENST00000478620 MOBPQ13875 183 aa12.19□□□□□ -0.46
COL19A1-203ENST00000478620 Q8NBF4 154 aa12.19□□□□□ -0.46
COL19A1-203ENST00000478620 C9orf153Q5TBE3 101 aa12.18□□□□□ -0.46
COL19A1-203ENST00000478620 SPAG11AQ6PDA7 123 aa12.18□□□□□ -0.46
COL19A1-203ENST00000478620 TMEM238LA0A1B0GVL6 79 aa12.17□□□□□ -0.46
COL19A1-203ENST00000478620 A6NJY4 79 aa12.17□□□□□ -0.46
COL19A1-203ENST00000478620 PRR4Q16378 134 aa12.17□□□□□ -0.46
COL19A1-203ENST00000478620 SSBP3-AS1Q7Z2R9 100 aa12.17□□□□□ -0.46
COL19A1-203ENST00000478620 UQCR10Q9UDW1 63 aa12.16□□□□□ -0.46
COL19A1-203ENST00000478620 LAMTOR3Q9UHA4 124 aa12.16□□□□□ -0.46
COL19A1-203ENST00000478620 A0A0B4J2C4 111 aa12.14□□□□□ -0.47
COL19A1-203ENST00000478620 TEX49A0A1B0GTD5 131 aa12.14□□□□□ -0.47
COL19A1-203ENST00000478620 SPRR1BP22528 89 aa12.14□□□□□ -0.47
COL19A1-203ENST00000478620 BVES-AS1Q5T3Y7 98 aa12.13□□□□□ -0.47
COL19A1-203ENST00000478620 HMCN2Q8NDA2 5059 aa12.13□□□□□ -0.47
COL19A1-203ENST00000478620 HSD52Q0P140 79 aa12.12□□□□□ -0.47
COL19A1-203ENST00000478620 Q1RN00 199 aa12.12□□□□□ -0.47
COL19A1-203ENST00000478620 LINC00575Q6W349 94 aa12.12□□□□□ -0.47
COL19A1-203ENST00000478620 CTAG1AP78358 180 aa12.11□□□□□ -0.47
COL19A1-203ENST00000478620 hADV29S1A0JD25 119 aa12.1□□□□□ -0.47
COL19A1-203ENST00000478620 FXYD2P54710 66 aa12.1□□□□□ -0.47
COL19A1-203ENST00000478620 PRO1854Q9UHT4 67 aa12.1□□□□□ -0.47
COL19A1-203ENST00000478620 SPINK1P00995 79 aa12.07□□□□□ -0.48
COL19A1-203ENST00000478620 RETNLBQ9BQ08 111 aa12.07□□□□□ -0.48
COL19A1-203ENST00000478620 SNCGO76070 127 aa12.06□□□□□ -0.48
COL19A1-203ENST00000478620 PRO1933Q9H354 126 aa12.06□□□□□ -0.48
COL19A1-203ENST00000478620 IGLV5-48A0A075B6I7 105 aa12.05□□□□□ -0.48
COL19A1-203ENST00000478620 H0YGX0 51 aa12.03□□□□□ -0.48
COL19A1-203ENST00000478620 SMIM6P0DI80 62 aa12.03□□□□□ -0.48
COL19A1-203ENST00000478620 LINC01547P58512 204 aaPredicted RBP12.03□□□□□ -0.48
COL19A1-203ENST00000478620 Q6ZQY7 126 aa12.03□□□□□ -0.48
COL19A1-203ENST00000478620 Q8N377 158 aa12.02□□□□□ -0.49
COL19A1-203ENST00000478620 SMIM29Q86T20 159 aa12□□□□□ -0.49
COL19A1-203ENST00000478620 HRCT1Q6UXD1 115 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms