RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 DHRS4-AS1Q9P1J3 65 aa7.41□□□□□ -1.22
COL27A1-204ENST00000477421 C1orf137Q5JT78 98 aa7.41□□□□□ -1.22
COL27A1-204ENST00000477421 WFDC13Q8IUB5 93 aa7.41□□□□□ -1.22
COL27A1-204ENST00000477421 LINC00612Q8N6U2 182 aa7.41□□□□□ -1.22
COL27A1-204ENST00000477421 PKIGQ9Y2B9 76 aa7.4□□□□□ -1.22
COL27A1-204ENST00000477421 CSMD2Q7Z408 3487 aa7.4□□□□□ -1.23
COL27A1-204ENST00000477421 HRCT1Q6UXD1 115 aa7.4□□□□□ -1.23
COL27A1-204ENST00000477421 Q6ZRP5 223 aa7.4□□□□□ -1.23
COL27A1-204ENST00000477421 PRR4Q16378 134 aa7.39□□□□□ -1.23
COL27A1-204ENST00000477421 C14orf177Q52M58 125 aa7.39□□□□□ -1.23
COL27A1-204ENST00000477421 LRCOL1A6NCL2 159 aa7.39□□□□□ -1.23
COL27A1-204ENST00000477421 LINC01547P58512 204 aaPredicted RBP7.39□□□□□ -1.23
COL27A1-204ENST00000477421 C22orf24Q9Y442 160 aa7.39□□□□□ -1.23
COL27A1-204ENST00000477421 STAB2Q8WWQ8 2551 aa7.39□□□□□ -1.23
COL27A1-204ENST00000477421 MRPL55Q7Z7F7 128 aaKnown RBP7.38□□□□□ -1.23
COL27A1-204ENST00000477421 B9D2Q9BPU9 175 aa7.38□□□□□ -1.23
COL27A1-204ENST00000477421 LINC00588Q9Y4M8 146 aa7.38□□□□□ -1.23
COL27A1-204ENST00000477421 FAM168BA1KXE4 195 aa7.37□□□□□ -1.23
COL27A1-204ENST00000477421 TNP2Q05952 138 aa7.37□□□□□ -1.23
COL27A1-204ENST00000477421 LINC00167Q96N53 147 aa7.37□□□□□ -1.23
COL27A1-204ENST00000477421 IGLV9-49A0A0B4J1Y8 123 aa7.36□□□□□ -1.23
COL27A1-204ENST00000477421 PRR34Q9NV39 138 aa7.36□□□□□ -1.23
COL27A1-204ENST00000477421 NDUFB1O75438 58 aa7.36□□□□□ -1.23
COL27A1-204ENST00000477421 REG3GQ6UW15 175 aa7.36□□□□□ -1.23
COL27A1-204ENST00000477421 FAM30AQ9NZY2 134 aa7.36□□□□□ -1.23
COL27A1-204ENST00000477421 FAM236DA0A1B0GTK5 79 aa7.35□□□□□ -1.23
COL27A1-204ENST00000477421 NHLRC4P0CG21 123 aaPredicted RBP7.35□□□□□ -1.23
COL27A1-204ENST00000477421 FAM236CP0DP71 79 aa7.35□□□□□ -1.23
COL27A1-204ENST00000477421 MP68P56378 58 aa7.35□□□□□ -1.23
COL27A1-204ENST00000477421 LY6G6CO95867 125 aa7.34□□□□□ -1.23
COL27A1-204ENST00000477421 ST20-AS1Q8NBB2 130 aa7.34□□□□□ -1.24
COL27A1-204ENST00000477421 A0A087WSZ3 146 aa7.33□□□□□ -1.24
COL27A1-204ENST00000477421 H3BNG1 76 aa7.33□□□□□ -1.24
COL27A1-204ENST00000477421 IGLV6-57P01721 117 aa7.33□□□□□ -1.24
COL27A1-204ENST00000477421 C1orf195Q5TG92 126 aa7.33□□□□□ -1.24
COL27A1-204ENST00000477421 SPINK6Q6UWN8 80 aa7.33□□□□□ -1.24
COL27A1-204ENST00000477421 Q6ZQT0 140 aa7.33□□□□□ -1.24
COL27A1-204ENST00000477421 MPLKIPQ8TAP9 179 aa7.33□□□□□ -1.24
COL27A1-204ENST00000477421 OXTP01178 125 aa7.33□□□□□ -1.24
COL27A1-204ENST00000477421 ELOF1P60002 83 aaKnown RBP7.33□□□□□ -1.24
COL27A1-204ENST00000477421 CHTF8P0CG12 524 aa7.32□□□□□ -1.24
COL27A1-204ENST00000477421 C15orf56Q8N910 161 aa7.32□□□□□ -1.24
COL27A1-204ENST00000477421 TENM1Q9UKZ4 2725 aa7.32□□□□□ -1.24
COL27A1-204ENST00000477421 VWFP04275 2813 aa7.32□□□□□ -1.24
COL27A1-204ENST00000477421 CASC10Q5T4H9 136 aa7.31□□□□□ -1.24
COL27A1-204ENST00000477421 TMEM258P61165 79 aa7.31□□□□□ -1.24
COL27A1-204ENST00000477421 TENM4Q6N022 2769 aa7.31□□□□□ -1.24
COL27A1-204ENST00000477421 TRAV7A0A075B6U4 112 aa7.3□□□□□ -1.24
COL27A1-204ENST00000477421 PRO0628Q9UI54 55 aa7.3□□□□□ -1.24
COL27A1-204ENST00000477421 FBN1P35555 2871 aaKnown RBP7.29□□□□□ -1.24
COL27A1-204ENST00000477421 K7EIL1 84 aa7.29□□□□□ -1.24
COL27A1-204ENST00000477421 GVQW2A0A096LPI5 108 aaPredicted RBP7.29□□□□□ -1.24
COL27A1-204ENST00000477421 PRR26Q8N8Z3 221 aa7.28□□□□□ -1.24
COL27A1-204ENST00000477421 Q8NDZ9 215 aa7.28□□□□□ -1.24
COL27A1-204ENST00000477421 Q9BRP9 147 aa7.28□□□□□ -1.24
COL27A1-204ENST00000477421 A0A0G2JQZ4 141 aa7.28□□□□□ -1.24
COL27A1-204ENST00000477421 A0A1W2PNN7 141 aa7.28□□□□□ -1.24
COL27A1-204ENST00000477421 BSNQ9UPA5 3926 aa7.28□□□□□ -1.24
COL27A1-204ENST00000477421 PRYO14603 147 aa7.27□□□□□ -1.24
COL27A1-204ENST00000477421 DNAH10OSP0CZ25 163 aa7.27□□□□□ -1.25
COL27A1-204ENST00000477421 OTOGQ6ZRI0 2925 aa7.27□□□□□ -1.25
COL27A1-204ENST00000477421 MDFIQ99750 246 aa7.27□□□□□ -1.25
COL27A1-204ENST00000477421 Q6ZRX8 168 aa7.26□□□□□ -1.25
COL27A1-204ENST00000477421 PHF5AQ7RTV0 110 aaKnown RBP7.26□□□□□ -1.25
COL27A1-204ENST00000477421 IGKV4-1P06312 121 aa7.25□□□□□ -1.25
COL27A1-204ENST00000477421 LINC00528Q8N1L1 170 aa7.24□□□□□ -1.25
COL27A1-204ENST00000477421 NUPR2A6NF83 97 aa7.24□□□□□ -1.25
COL27A1-204ENST00000477421 TMEM254Q8TBM7 123 aa7.23□□□□□ -1.25
COL27A1-204ENST00000477421 TM2D3Q9BRN9 247 aa7.23□□□□□ -1.25
COL27A1-204ENST00000477421 NBPF19A0A087WUL8 3843 aa7.23□□□□□ -1.25
COL27A1-204ENST00000477421 PDZD2O15018 2839 aa7.23□□□□□ -1.25
COL27A1-204ENST00000477421 LOC110117498A0A087WWA1 95 aa7.22□□□□□ -1.25
COL27A1-204ENST00000477421 CXCL6P80162 114 aa7.22□□□□□ -1.25
COL27A1-204ENST00000477421 LINC00208Q96KT6 92 aa7.22□□□□□ -1.25
COL27A1-204ENST00000477421 CD164Q04900 197 aa7.21□□□□□ -1.25
COL27A1-204ENST00000477421 SMIM29Q86T20 159 aa7.21□□□□□ -1.25
COL27A1-204ENST00000477421 BRK1Q8WUW1 75 aa7.21□□□□□ -1.26
COL27A1-204ENST00000477421 LINC00474Q9P2X8 69 aa7.21□□□□□ -1.26
COL27A1-204ENST00000477421 ZFHX3Q15911 3703 aa7.21□□□□□ -1.26
COL27A1-204ENST00000477421 CRYGAP11844 174 aa7.21□□□□□ -1.26
COL27A1-204ENST00000477421 TENM3Q9P273 2699 aa7.2□□□□□ -1.26
COL27A1-204ENST00000477421 LINC00476Q8WZB0 136 aa7.2□□□□□ -1.26
COL27A1-204ENST00000477421 TRBV7-6A0A0J9YX20 115 aa7.19□□□□□ -1.26
COL27A1-204ENST00000477421 Q8N377 158 aa7.19□□□□□ -1.26
COL27A1-204ENST00000477421 KCNQ1DNQ9H478 68 aa7.19□□□□□ -1.26
COL27A1-204ENST00000477421 IGLV5-52A0A0A0MRZ9 124 aa7.18□□□□□ -1.26
COL27A1-204ENST00000477421 IGLV1-50A0A075B6I6 118 aa7.18□□□□□ -1.26
COL27A1-204ENST00000477421 ERC2-IT1O76042 136 aa7.18□□□□□ -1.26
COL27A1-204ENST00000477421 Q8NBF4 154 aa7.18□□□□□ -1.26
COL27A1-204ENST00000477421 CIRBP-AS1Q8TBR5 109 aa7.18□□□□□ -1.26
COL27A1-204ENST00000477421 EPM2AB3EWF7 344 aa7.18□□□□□ -1.26
COL27A1-204ENST00000477421 NDUFC1O43677 76 aa7.18□□□□□ -1.26
COL27A1-204ENST00000477421 RPL37AP61513 92 aaKnown RBP7.17□□□□□ -1.26
COL27A1-204ENST00000477421 C16orf90A8MZG2 172 aa7.16□□□□□ -1.26
COL27A1-204ENST00000477421 IGHV6-1A0A0B4J1U7 121 aa7.16□□□□□ -1.26
COL27A1-204ENST00000477421 NBDYA0A0U1RRE5 68 aa7.16□□□□□ -1.26
COL27A1-204ENST00000477421 CASC2Q6XLA1 102 aa7.15□□□□□ -1.26
COL27A1-204ENST00000477421 LINC01600Q96MT4 127 aa7.15□□□□□ -1.26
COL27A1-204ENST00000477421 PLA2G2DQ9UNK4 145 aa7.15□□□□□ -1.27
COL27A1-204ENST00000477421 TRBV7-4A0A0J9YYF1 115 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 256.9 ms