RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 TCRBV3S1A0A5B6 114 aa3.47□□□□□ -1.85
LRCH3-215ENST00000476664 IGKV1-17P01599 117 aa3.47□□□□□ -1.85
LRCH3-215ENST00000476664 LINC00032P0C843 101 aa3.47□□□□□ -1.85
LRCH3-215ENST00000476664 UNQ5815/PRO19632Q6UWF5 114 aa3.47□□□□□ -1.85
LRCH3-215ENST00000476664 MACF1Q9UPN3 7388 aaKnown RBP3.47□□□□□ -1.85
LRCH3-215ENST00000476664 A6NIN4 97 aa3.46□□□□□ -1.86
LRCH3-215ENST00000476664 C10orf55Q5SWW7 151 aa3.46□□□□□ -1.86
LRCH3-215ENST00000476664 RPL7L1Q6DKI1 246 aaKnown RBP3.46□□□□□ -1.86
LRCH3-215ENST00000476664 ALKAL2Q6UX46 152 aa3.46□□□□□ -1.86
LRCH3-215ENST00000476664 LEAP2Q969E1 77 aa3.46□□□□□ -1.86
LRCH3-215ENST00000476664 TMEM262E9PQX1 116 aa3.45□□□□□ -1.86
LRCH3-215ENST00000476664 CBLN1P23435 193 aa3.45□□□□□ -1.86
LRCH3-215ENST00000476664 S100A13Q99584 98 aa3.45□□□□□ -1.86
LRCH3-215ENST00000476664 TMEM30CPA0ZSE6 113 aa3.44□□□□□ -1.86
LRCH3-215ENST00000476664 HTN3P15516 51 aa3.44□□□□□ -1.86
LRCH3-215ENST00000476664 TDRG1Q3Y452 100 aa3.44□□□□□ -1.86
LRCH3-215ENST00000476664 KLK9Q9UKQ9 250 aa3.44□□□□□ -1.86
LRCH3-215ENST00000476664 CPSF4LA6NMK7 179 aaKnown RBP3.43□□□□□ -1.86
LRCH3-215ENST00000476664 SIX6O95475 246 aa3.43□□□□□ -1.86
LRCH3-215ENST00000476664 SLC25A6P12236 298 aa3.43□□□□□ -1.86
LRCH3-215ENST00000476664 CCL18P55774 89 aa3.43□□□□□ -1.86
LRCH3-215ENST00000476664 Q6ZSA8 131 aa3.43□□□□□ -1.86
LRCH3-215ENST00000476664 Q8N8P6 123 aa3.43□□□□□ -1.86
LRCH3-215ENST00000476664 FAM103A1Q9BTL3 118 aaKnown RBP3.43□□□□□ -1.86
LRCH3-215ENST00000476664 NEBP20929 6669 aa3.42□□□□□ -1.86
LRCH3-215ENST00000476664 TRBV6-4A0A1B0GX49 114 aa3.42□□□□□ -1.86
LRCH3-215ENST00000476664 IGLC1P0CG04 106 aa3.42□□□□□ -1.86
LRCH3-215ENST00000476664 ATP5EP56381 51 aaPredicted RBP3.42□□□□□ -1.86
LRCH3-215ENST00000476664 IQCJQ1A5X6 159 aa3.42□□□□□ -1.86
LRCH3-215ENST00000476664 COA5Q86WW8 74 aa3.42□□□□□ -1.86
LRCH3-215ENST00000476664 DSCR8Q96T75 97 aa3.42□□□□□ -1.86
LRCH3-215ENST00000476664 NUPR1O60356 82 aa3.41□□□□□ -1.86
LRCH3-215ENST00000476664 LYPD5Q6UWN5 251 aa3.41□□□□□ -1.86
LRCH3-215ENST00000476664 V9GYH0 126 aa3.41□□□□□ -1.86
LRCH3-215ENST00000476664 A0A0J9YY99 117 aa3.4□□□□□ -1.87
LRCH3-215ENST00000476664 SPRR5A0A1B0GTR4 108 aa3.4□□□□□ -1.87
LRCH3-215ENST00000476664 RNASE3P12724 160 aaKnown RBP3.4□□□□□ -1.87
LRCH3-215ENST00000476664 RPL37AP61513 92 aaKnown RBP3.4□□□□□ -1.87
LRCH3-215ENST00000476664 UBE2G1P62253 170 aa3.4□□□□□ -1.87
LRCH3-215ENST00000476664 C9orf116Q5BN46 136 aaPredicted RBP3.4□□□□□ -1.87
LRCH3-215ENST00000476664 S100A7L2Q5SY68 101 aa3.4□□□□□ -1.87
LRCH3-215ENST00000476664 C5orf38Q86SI9 138 aa3.4□□□□□ -1.87
LRCH3-215ENST00000476664 UBE2L5PA0A1B0GUS4 154 aa3.39□□□□□ -1.87
LRCH3-215ENST00000476664 H3BQ15 152 aa3.39□□□□□ -1.87
LRCH3-215ENST00000476664 H3BUA1 57 aa3.39□□□□□ -1.87
LRCH3-215ENST00000476664 SPART-AS1P0CW21 52 aa3.39□□□□□ -1.87
LRCH3-215ENST00000476664 UBE2L3P68036 154 aaKnown RBP3.39□□□□□ -1.87
LRCH3-215ENST00000476664 ATG5Q9H1Y0 275 aa3.39□□□□□ -1.87
LRCH3-215ENST00000476664 CDC42SE1Q9NRR8 79 aa3.39□□□□□ -1.87
LRCH3-215ENST00000476664 FCGBPQ9Y6R7 5405 aaPredicted RBP3.38□□□□□ -1.87
LRCH3-215ENST00000476664 TRBV6-5A0A0K0K1A5 114 aa3.38□□□□□ -1.87
LRCH3-215ENST00000476664 SSSCA1O60232 199 aa3.38□□□□□ -1.87
LRCH3-215ENST00000476664 NDUFA3O95167 84 aa3.38□□□□□ -1.87
LRCH3-215ENST00000476664 IGKCP01834 107 aa3.38□□□□□ -1.87
LRCH3-215ENST00000476664 S100A3P33764 101 aa3.38□□□□□ -1.87
LRCH3-215ENST00000476664 RPS27P42677 84 aaKnown RBP3.38□□□□□ -1.87
LRCH3-215ENST00000476664 INSL4Q14641 139 aa3.38□□□□□ -1.87
LRCH3-215ENST00000476664 DMAC1Q96GE9 116 aa3.38□□□□□ -1.87
LRCH3-215ENST00000476664 USMG5Q96IX5 58 aa3.38□□□□□ -1.87
LRCH3-215ENST00000476664 C22orf24Q9Y442 160 aa3.38□□□□□ -1.87
LRCH3-215ENST00000476664 TRBV10-1A0A0K0K1A3 114 aa3.37□□□□□ -1.87
LRCH3-215ENST00000476664 IGLC7A0M8Q6 106 aa3.37□□□□□ -1.87
LRCH3-215ENST00000476664 RBM3P98179 157 aaKnown RBP3.37□□□□□ -1.87
LRCH3-215ENST00000476664 HMGN3Q15651 99 aa3.37□□□□□ -1.87
LRCH3-215ENST00000476664 CSAG1Q6PB30 78 aa3.37□□□□□ -1.87
LRCH3-215ENST00000476664 DPH3P1Q9H4G8 78 aa3.37□□□□□ -1.87
LRCH3-215ENST00000476664 TMEM14BQ9NUH8 114 aa3.37□□□□□ -1.87
LRCH3-215ENST00000476664 BET1LQ9NYM9 111 aa3.37□□□□□ -1.87
LRCH3-215ENST00000476664 CACFD1Q9UGQ2 172 aa3.37□□□□□ -1.87
LRCH3-215ENST00000476664 A0A0G2JND7 137 aa3.36□□□□□ -1.87
LRCH3-215ENST00000476664 C7orf77A4D0Y5 90 aa3.36□□□□□ -1.87
LRCH3-215ENST00000476664 MPV17LQ2QL34 196 aa3.36□□□□□ -1.87
LRCH3-215ENST00000476664 LINC01600Q96MT4 127 aa3.36□□□□□ -1.87
LRCH3-215ENST00000476664 NPVFQ9HCQ7 196 aa3.36□□□□□ -1.87
LRCH3-215ENST00000476664 PLGLAQ15195 96 aa3.35□□□□□ -1.87
LRCH3-215ENST00000476664 KRTAP20-1Q3LI63 56 aa3.35□□□□□ -1.87
LRCH3-215ENST00000476664 DEFB107AQ8IZN7 70 aa3.35□□□□□ -1.87
LRCH3-215ENST00000476664 KRTAP4-2Q9BYR5 136 aa3.35□□□□□ -1.87
LRCH3-215ENST00000476664 MRPL36Q9P0J6 103 aaKnown RBP3.35□□□□□ -1.87
LRCH3-215ENST00000476664 TRBV10-3A0A0K0K1G6 114 aa3.34□□□□□ -1.87
LRCH3-215ENST00000476664 JMJD7-PLA2G4BH0Y9G9 81 aa3.34□□□□□ -1.87
LRCH3-215ENST00000476664 PPYP01298 95 aa3.34□□□□□ -1.87
LRCH3-215ENST00000476664 IGHV3-30P01768 117 aa3.34□□□□□ -1.87
LRCH3-215ENST00000476664 IGHV3-30-5P0DP03 117 aa3.34□□□□□ -1.87
LRCH3-215ENST00000476664 ZNF137PP52743 207 aa3.34□□□□□ -1.87
LRCH3-215ENST00000476664 UQCR10Q9UDW1 63 aa3.34□□□□□ -1.87
LRCH3-215ENST00000476664 USH2AO75445 5202 aa3.33□□□□□ -1.88
LRCH3-215ENST00000476664 KRTAP10-8P60410 259 aa3.33□□□□□ -1.88
LRCH3-215ENST00000476664 FXYD3Q14802 87 aa3.33□□□□□ -1.88
LRCH3-215ENST00000476664 SPTSSBQ8NFR3 76 aa3.33□□□□□ -1.88
LRCH3-215ENST00000476664 VAMP8Q9BV40 100 aa3.33□□□□□ -1.88
LRCH3-215ENST00000476664 TMEM14CQ9P0S9 112 aa3.33□□□□□ -1.88
LRCH3-215ENST00000476664 FAM223BA6NKX1 122 aa3.32□□□□□ -1.88
LRCH3-215ENST00000476664 K7EP34 96 aa3.32□□□□□ -1.88
LRCH3-215ENST00000476664 IGKV4-1P06312 121 aa3.32□□□□□ -1.88
LRCH3-215ENST00000476664 SFTA3P0C7M3 94 aa3.32□□□□□ -1.88
LRCH3-215ENST00000476664 IGLC2P0DOY2 106 aa3.32□□□□□ -1.88
LRCH3-215ENST00000476664 IGLC3P0DOY3 106 aa3.32□□□□□ -1.88
LRCH3-215ENST00000476664 FAM223AQ8IWN6 122 aa3.32□□□□□ -1.88
LRCH3-215ENST00000476664 MRPL35Q9NZE8 188 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms