RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 B9D2Q9BPU9 175 aa6.94□□□□□ -1.3
ABCF1-205ENST00000475993 ZFYVE26Q68DK2 2539 aa6.94□□□□□ -1.3
ABCF1-205ENST00000475993 IGLV5-48A0A075B6I7 105 aa6.94□□□□□ -1.3
ABCF1-205ENST00000475993 ETDCA0A1B0GVM5 59 aa6.94□□□□□ -1.3
ABCF1-205ENST00000475993 ST20-AS1Q8NBB2 130 aa6.94□□□□□ -1.3
ABCF1-205ENST00000475993 A0A1B0GW54 56 aa6.94□□□□□ -1.3
ABCF1-205ENST00000475993 CDC42SE1Q9NRR8 79 aa6.94□□□□□ -1.3
ABCF1-205ENST00000475993 USP9YO00507 2555 aaPredicted RBP6.93□□□□□ -1.3
ABCF1-205ENST00000475993 FAM208BQ5VWN6 2430 aa6.93□□□□□ -1.3
ABCF1-205ENST00000475993 KPRPQ5T749 579 aaPredicted RBP6.92□□□□□ -1.3
ABCF1-205ENST00000475993 Q75L30 129 aa6.92□□□□□ -1.3
ABCF1-205ENST00000475993 POLQO75417 2590 aa6.92□□□□□ -1.3
ABCF1-205ENST00000475993 IGLV1-51P01701 117 aa6.91□□□□□ -1.3
ABCF1-205ENST00000475993 MYO18BQ8IUG5 2567 aa6.91□□□□□ -1.3
ABCF1-205ENST00000475993 NIPBLQ6KC79 2804 aaeCLIP6.91□□□□□ -1.3
ABCF1-205ENST00000475993 LINC00313P59037 77 aa6.9□□□□□ -1.3
ABCF1-205ENST00000475993 LINC01554Q52M75 96 aa6.9□□□□□ -1.3
ABCF1-205ENST00000475993 Q8N377 158 aa6.9□□□□□ -1.3
ABCF1-205ENST00000475993 LINC00208Q96KT6 92 aa6.9□□□□□ -1.3
ABCF1-205ENST00000475993 PRR34Q9NV39 138 aa6.9□□□□□ -1.3
ABCF1-205ENST00000475993 FBN2P35556 2912 aa6.9□□□□□ -1.3
ABCF1-205ENST00000475993 SERTAD4-AS1Q5TG53 156 aa6.9□□□□□ -1.3
ABCF1-205ENST00000475993 APCP25054 2843 aa6.9□□□□□ -1.31
ABCF1-205ENST00000475993 ACACBO00763 2458 aa6.9□□□□□ -1.31
ABCF1-205ENST00000475993 A0A1W2PNM2 257 aa6.9□□□□□ -1.31
ABCF1-205ENST00000475993 DSCR10P59022 87 aa6.89□□□□□ -1.31
ABCF1-205ENST00000475993 FN1P02751 2386 aaKnown RBP6.89□□□□□ -1.31
ABCF1-205ENST00000475993 X6R8D5 127 aa6.89□□□□□ -1.31
ABCF1-205ENST00000475993 UTP20O75691 2785 aaKnown RBP6.89□□□□□ -1.31
ABCF1-205ENST00000475993 USP9XQ93008 2570 aaPredicted RBP6.88□□□□□ -1.31
ABCF1-205ENST00000475993 NDUFB1O75438 58 aa6.88□□□□□ -1.31
ABCF1-205ENST00000475993 PTPN13Q12923 2485 aa6.87□□□□□ -1.31
ABCF1-205ENST00000475993 K7EQZ3 153 aa6.87□□□□□ -1.31
ABCF1-205ENST00000475993 DEFB105AQ8NG35 78 aa6.87□□□□□ -1.31
ABCF1-205ENST00000475993 SETD2Q9BYW2 2564 aaPredicted RBP6.86□□□□□ -1.31
ABCF1-205ENST00000475993 TNP2Q05952 138 aa6.86□□□□□ -1.31
ABCF1-205ENST00000475993 EGFEM1PQ0D2K5 195 aa6.86□□□□□ -1.31
ABCF1-205ENST00000475993 ADM2Q7Z4H4 148 aa6.86□□□□□ -1.31
ABCF1-205ENST00000475993 FLNCQ14315 2725 aa6.86□□□□□ -1.31
ABCF1-205ENST00000475993 Q8NBF4 154 aa6.86□□□□□ -1.31
ABCF1-205ENST00000475993 LOC101927531A0A1B0GV80 90 aa6.85□□□□□ -1.31
ABCF1-205ENST00000475993 LELP1Q5T871 98 aa6.85□□□□□ -1.31
ABCF1-205ENST00000475993 SPRR4Q96PI1 79 aa6.85□□□□□ -1.31
ABCF1-205ENST00000475993 C1orf137Q5JT78 98 aa6.84□□□□□ -1.31
ABCF1-205ENST00000475993 CAMK2N2Q96S95 79 aa6.84□□□□□ -1.31
ABCF1-205ENST00000475993 KCNQ1DNQ9H478 68 aa6.84□□□□□ -1.31
ABCF1-205ENST00000475993 EPG5Q9HCE0 2579 aa6.84□□□□□ -1.32
ABCF1-205ENST00000475993 DNAJC9-AS1A6NH13 148 aa6.83□□□□□ -1.32
ABCF1-205ENST00000475993 PKD1L2Q7Z442 2459 aa6.83□□□□□ -1.32
ABCF1-205ENST00000475993 NBEAL2Q6ZNJ1 2754 aa6.83□□□□□ -1.32
ABCF1-205ENST00000475993 TEX15Q9BXT5 2789 aa6.83□□□□□ -1.32
ABCF1-205ENST00000475993 DEFB116Q30KQ4 102 aa6.83□□□□□ -1.32
ABCF1-205ENST00000475993 LRRK2Q5S007 2527 aa6.82□□□□□ -1.32
ABCF1-205ENST00000475993 SPANXA2-OT1Q8N9U9 137 aa6.81□□□□□ -1.32
ABCF1-205ENST00000475993 MP68P56378 58 aa6.81□□□□□ -1.32
ABCF1-205ENST00000475993 ABCA12Q86UK0 2595 aa6.81□□□□□ -1.32
ABCF1-205ENST00000475993 DOPEY1Q5JWR5 2465 aa6.8□□□□□ -1.32
ABCF1-205ENST00000475993 SPINK7P58062 85 aa6.8□□□□□ -1.32
ABCF1-205ENST00000475993 Q9BRP9 147 aa6.8□□□□□ -1.32
ABCF1-205ENST00000475993 CFAP46Q8IYW2 2715 aa6.8□□□□□ -1.32
ABCF1-205ENST00000475993 DHRS4-AS1Q9P1J3 65 aa6.8□□□□□ -1.32
ABCF1-205ENST00000475993 GCN1Q92616 2671 aaKnown RBP6.79□□□□□ -1.32
ABCF1-205ENST00000475993 SONP18583 2426 aaKnown RBP6.79□□□□□ -1.32
ABCF1-205ENST00000475993 NF1P21359 2839 aa6.79□□□□□ -1.32
ABCF1-205ENST00000475993 DEFB4AO15263 64 aa6.79□□□□□ -1.32
ABCF1-205ENST00000475993 SPAG11AQ6PDA7 123 aa6.79□□□□□ -1.32
ABCF1-205ENST00000475993 KRTAP26-1Q6PEX3 210 aa6.79□□□□□ -1.32
ABCF1-205ENST00000475993 Q6ZRX8 168 aa6.79□□□□□ -1.32
ABCF1-205ENST00000475993 CCDC168Q8NDH2 2452 aa6.78□□□□□ -1.32
ABCF1-205ENST00000475993 CASC2Q6XLA1 102 aa6.78□□□□□ -1.32
ABCF1-205ENST00000475993 COA5Q86WW8 74 aa6.78□□□□□ -1.32
ABCF1-205ENST00000475993 C15orf56Q8N910 161 aa6.78□□□□□ -1.32
ABCF1-205ENST00000475993 C7orf33Q8WU49 177 aa6.78□□□□□ -1.32
ABCF1-205ENST00000475993 KRTAP4-16G5E9R7 235 aaPredicted RBP6.77□□□□□ -1.33
ABCF1-205ENST00000475993 Q8NAQ8 132 aa6.76□□□□□ -1.33
ABCF1-205ENST00000475993 NAV2Q8IVL1 2488 aa6.76□□□□□ -1.33
ABCF1-205ENST00000475993 H3BPC8 53 aa6.75□□□□□ -1.33
ABCF1-205ENST00000475993 WFDC13Q8IUB5 93 aa6.75□□□□□ -1.33
ABCF1-205ENST00000475993 IGKV2D-24A0A075B6R9 120 aa6.74□□□□□ -1.33
ABCF1-205ENST00000475993 KRTAP29-1A8MX34 341 aaPredicted RBP6.74□□□□□ -1.33
ABCF1-205ENST00000475993 SPRR1AP35321 89 aa6.73□□□□□ -1.33
ABCF1-205ENST00000475993 DEFB135Q30KP9 77 aa6.73□□□□□ -1.33
ABCF1-205ENST00000475993 HTN3P15516 51 aa6.72□□□□□ -1.33
ABCF1-205ENST00000475993 H0Y9P7 68 aa6.72□□□□□ -1.33
ABCF1-205ENST00000475993 C9orf163Q8N9P6 203 aa6.72□□□□□ -1.33
ABCF1-205ENST00000475993 LINC01558Q9Y6Z2 57 aa6.72□□□□□ -1.33
ABCF1-205ENST00000475993 ZNF462Q96JM2 2506 aa6.72□□□□□ -1.33
ABCF1-205ENST00000475993 WFDC10BQ8IUB3 73 aa6.71□□□□□ -1.33
ABCF1-205ENST00000475993 LINC00476Q8WZB0 136 aa6.71□□□□□ -1.33
ABCF1-205ENST00000475993 PLA2G1BP04054 148 aaKnown RBP6.71□□□□□ -1.34
ABCF1-205ENST00000475993 ZNF706Q9Y5V0 76 aaPredicted RBP6.71□□□□□ -1.34
ABCF1-205ENST00000475993 IGLV1-50A0A075B6I6 118 aa6.71□□□□□ -1.34
ABCF1-205ENST00000475993 RETNLBQ9BQ08 111 aa6.71□□□□□ -1.34
ABCF1-205ENST00000475993 RPL37AP8A6NKH3 93 aa6.7□□□□□ -1.34
ABCF1-205ENST00000475993 PLA2G2DQ9UNK4 145 aa6.7□□□□□ -1.34
ABCF1-205ENST00000475993 ZNF469Q96JG9 3925 aaPredicted RBP6.7□□□□□ -1.34
ABCF1-205ENST00000475993 IGSF10Q6WRI0 2623 aa6.7□□□□□ -1.34
ABCF1-205ENST00000475993 SPART-AS1P0CW21 52 aa6.69□□□□□ -1.34
ABCF1-205ENST00000475993 NOTCH2Q04721 2471 aa6.68□□□□□ -1.34
ABCF1-205ENST00000475993 IGLV5-37A0A075B6J1 123 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms