RNA–Protein interactions for RNA: ENST00000474851.1

LSAMP-203, Transcript of limbic system associated membrane protein, humanhuman

TSL 5

Gene LSAMP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-203ENST00000474851 ZNF22P17026 224 aaPredicted RBP4.62□□□□□ -1.67
LSAMP-203ENST00000474851 KRTAP10-4P60372 401 aaPredicted RBP4.62□□□□□ -1.67
LSAMP-203ENST00000474851 CNBPP62633 177 aaKnown RBP4.62□□□□□ -1.67
LSAMP-203ENST00000474851 GAGE2AQ6NT46 116 aa4.62□□□□□ -1.67
LSAMP-203ENST00000474851 SMCR5Q8TEV8 140 aa4.62□□□□□ -1.67
LSAMP-203ENST00000474851 KRTAP4-11Q9BYQ6 195 aa4.62□□□□□ -1.67
LSAMP-203ENST00000474851 LRP1Q07954 4544 aaKnown RBP4.62□□□□□ -1.67
LSAMP-203ENST00000474851 NDUFC2-KCTD14E9PQ53 114 aa4.61□□□□□ -1.67
LSAMP-203ENST00000474851 F8WDY8 70 aa4.61□□□□□ -1.67
LSAMP-203ENST00000474851 PANO1I0J062 215 aa4.61□□□□□ -1.67
LSAMP-203ENST00000474851 C15orf56Q8N910 161 aa4.61□□□□□ -1.67
LSAMP-203ENST00000474851 CHCHD10Q8WYQ3 142 aaPredicted RBP4.61□□□□□ -1.67
LSAMP-203ENST00000474851 CDC42SE2Q9NRR3 84 aa4.61□□□□□ -1.67
LSAMP-203ENST00000474851 IGKV3OR2-268A0A0C4DH90 116 aa4.6□□□□□ -1.67
LSAMP-203ENST00000474851 A0A0J9YXY3 114 aa4.6□□□□□ -1.67
LSAMP-203ENST00000474851 LINC00959A0A1B0GUT2 108 aa4.6□□□□□ -1.67
LSAMP-203ENST00000474851 TIMM17BO60830 172 aa4.6□□□□□ -1.67
LSAMP-203ENST00000474851 OXTP01178 125 aa4.6□□□□□ -1.67
LSAMP-203ENST00000474851 FAM104AQ969W3 186 aa4.6□□□□□ -1.67
LSAMP-203ENST00000474851 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.6□□□□□ -1.67
LSAMP-203ENST00000474851 COX6CP09669 75 aa4.59□□□□□ -1.67
LSAMP-203ENST00000474851 LGALS3P17931 250 aaKnown RBP4.59□□□□□ -1.67
LSAMP-203ENST00000474851 CIRBPQ14011 172 aaKnown RBP4.59□□□□□ -1.67
LSAMP-203ENST00000474851 TIMM21Q9BVV7 248 aa4.59□□□□□ -1.67
LSAMP-203ENST00000474851 C22orf24Q9Y442 160 aa4.59□□□□□ -1.67
LSAMP-203ENST00000474851 FAT3Q8TDW7 4589 aa4.58□□□□□ -1.68
LSAMP-203ENST00000474851 TRACP01848 142 aa4.58□□□□□ -1.68
LSAMP-203ENST00000474851 XCL1P47992 114 aa4.58□□□□□ -1.68
LSAMP-203ENST00000474851 RPL18AQ02543 176 aaKnown RBP4.58□□□□□ -1.68
LSAMP-203ENST00000474851 SERP2Q8N6R1 65 aa4.58□□□□□ -1.68
LSAMP-203ENST00000474851 PLA2G2DQ9UNK4 145 aa4.58□□□□□ -1.68
LSAMP-203ENST00000474851 UBE2D4Q9Y2X8 147 aa4.58□□□□□ -1.68
LSAMP-203ENST00000474851 FLG2Q5D862 2391 aaPredicted RBP4.58□□□□□ -1.68
LSAMP-203ENST00000474851 GVQW2A0A096LPI5 108 aaPredicted RBP4.57□□□□□ -1.68
LSAMP-203ENST00000474851 COX7A2LO14548 114 aa4.57□□□□□ -1.68
LSAMP-203ENST00000474851 PLA2G1BP04054 148 aaKnown RBP4.57□□□□□ -1.68
LSAMP-203ENST00000474851 HIGD2BQ4VC39 106 aa4.57□□□□□ -1.68
LSAMP-203ENST00000474851 Q6JHZ5 121 aa4.57□□□□□ -1.68
LSAMP-203ENST00000474851 CD164L2Q6UWJ8 174 aa4.57□□□□□ -1.68
LSAMP-203ENST00000474851 CYSTM1Q9H1C7 97 aa4.57□□□□□ -1.68
LSAMP-203ENST00000474851 CHTF8P0CG12 524 aa4.56□□□□□ -1.68
LSAMP-203ENST00000474851 RPL39P62891 51 aaKnown RBP4.56□□□□□ -1.68
LSAMP-203ENST00000474851 OBSCN-AS1Q96MR7 158 aa4.56□□□□□ -1.68
LSAMP-203ENST00000474851 PYGO1Q9Y3Y4 419 aa4.56□□□□□ -1.68
LSAMP-203ENST00000474851 IGHV3-64A0A075B6Q5 118 aa4.55□□□□□ -1.68
LSAMP-203ENST00000474851 A0A087WYN8 130 aa4.55□□□□□ -1.68
LSAMP-203ENST00000474851 hADV29S1A0JD25 119 aa4.55□□□□□ -1.68
LSAMP-203ENST00000474851 MRPS36P82909 103 aaKnown RBP4.55□□□□□ -1.68
LSAMP-203ENST00000474851 COX6A2Q02221 97 aa4.55□□□□□ -1.68
LSAMP-203ENST00000474851 SS18Q15532 418 aa4.55□□□□□ -1.68
LSAMP-203ENST00000474851 Q1RN00 199 aa4.55□□□□□ -1.68
LSAMP-203ENST00000474851 RNASE13Q5GAN3 156 aaKnown RBP4.55□□□□□ -1.68
LSAMP-203ENST00000474851 SPACA4Q8TDM5 124 aa4.55□□□□□ -1.68
LSAMP-203ENST00000474851 OPRPNQ99935 248 aaPredicted RBP4.55□□□□□ -1.68
LSAMP-203ENST00000474851 PRO0628Q9UI54 55 aa4.55□□□□□ -1.68
LSAMP-203ENST00000474851 DMBT1Q9UGM3 2413 aaPredicted RBP4.55□□□□□ -1.68
LSAMP-203ENST00000474851 TRAV13-1A0A0B4J241 112 aa4.54□□□□□ -1.68
LSAMP-203ENST00000474851 IGHV1-58A0A0C4DH39 117 aa4.54□□□□□ -1.68
LSAMP-203ENST00000474851 KRTAP29-1A8MX34 341 aaPredicted RBP4.54□□□□□ -1.68
LSAMP-203ENST00000474851 BCE1O60756 84 aa4.54□□□□□ -1.68
LSAMP-203ENST00000474851 NDUFC2O95298 119 aa4.54□□□□□ -1.68
LSAMP-203ENST00000474851 C4orf26Q17RF5 130 aa4.54□□□□□ -1.68
LSAMP-203ENST00000474851 ADAMTSL4-AS1Q5T5F5 129 aa4.54□□□□□ -1.68
LSAMP-203ENST00000474851 CLEC2BQ92478 149 aa4.54□□□□□ -1.68
LSAMP-203ENST00000474851 PLAC8Q9NZF1 115 aa4.54□□□□□ -1.68
LSAMP-203ENST00000474851 IGHV3OR16-9A0A0B4J2B5 98 aa4.53□□□□□ -1.68
LSAMP-203ENST00000474851 IGLV4-3A0A075B6K6 122 aa4.52□□□□□ -1.69
LSAMP-203ENST00000474851 IGLV5-45A0A087WSX0 123 aa4.52□□□□□ -1.69
LSAMP-203ENST00000474851 H7C2G1 150 aa4.52□□□□□ -1.69
LSAMP-203ENST00000474851 RPL37AP61513 92 aaKnown RBP4.52□□□□□ -1.69
LSAMP-203ENST00000474851 A0A096LNI7 61 aa4.51□□□□□ -1.69
LSAMP-203ENST00000474851 IGKV2-24A0A0C4DH68 120 aa4.51□□□□□ -1.69
LSAMP-203ENST00000474851 TINCRA0A1B0GVN0 87 aa4.51□□□□□ -1.69
LSAMP-203ENST00000474851 SYCNQ0VAF6 134 aa4.51□□□□□ -1.69
LSAMP-203ENST00000474851 HRCT1Q6UXD1 115 aa4.51□□□□□ -1.69
LSAMP-203ENST00000474851 LINC01561Q8N1V8 128 aa4.51□□□□□ -1.69
LSAMP-203ENST00000474851 DSCR8Q96T75 97 aa4.51□□□□□ -1.69
LSAMP-203ENST00000474851 A0A0J9YXV3 536 aa4.5□□□□□ -1.69
LSAMP-203ENST00000474851 NDUFA1O15239 70 aa4.5□□□□□ -1.69
LSAMP-203ENST00000474851 BAALC-AS2P0C853 105 aa4.5□□□□□ -1.69
LSAMP-203ENST00000474851 LINC00242Q5T6M2 205 aa4.5□□□□□ -1.69
LSAMP-203ENST00000474851 Q6ZRU5 148 aa4.5□□□□□ -1.69
LSAMP-203ENST00000474851 FAM19A3Q7Z5A8 133 aa4.5□□□□□ -1.69
LSAMP-203ENST00000474851 NDUFA12Q9UI09 145 aa4.5□□□□□ -1.69
LSAMP-203ENST00000474851 SERP1Q9Y6X1 66 aa4.5□□□□□ -1.69
LSAMP-203ENST00000474851 PKHD1L1Q86WI1 4243 aa4.5□□□□□ -1.69
LSAMP-203ENST00000474851 HMCN2Q8NDA2 5059 aa4.49□□□□□ -1.69
LSAMP-203ENST00000474851 IGLV5-39A0A0G2JS06 123 aa4.49□□□□□ -1.69
LSAMP-203ENST00000474851 TRBV10-3A0A0K0K1G6 114 aa4.49□□□□□ -1.69
LSAMP-203ENST00000474851 A0A1W2PNN7 141 aa4.49□□□□□ -1.69
LSAMP-203ENST00000474851 PFN2P35080 140 aa4.49□□□□□ -1.69
LSAMP-203ENST00000474851 KIAA0087Q14695 138 aa4.49□□□□□ -1.69
LSAMP-203ENST00000474851 ATP5EP2Q5VTU8 51 aa4.49□□□□□ -1.69
LSAMP-203ENST00000474851 COPS9Q8WXC6 57 aa4.49□□□□□ -1.69
LSAMP-203ENST00000474851 LINC00474Q9P2X8 69 aa4.49□□□□□ -1.69
LSAMP-203ENST00000474851 A0A087WZ39 114 aa4.48□□□□□ -1.69
LSAMP-203ENST00000474851 PRSS2P07478 247 aa4.48□□□□□ -1.69
LSAMP-203ENST00000474851 RPL28P46779 137 aaKnown RBP4.48□□□□□ -1.69
LSAMP-203ENST00000474851 SPAG11BQ08648 103 aa4.48□□□□□ -1.69
LSAMP-203ENST00000474851 C10orf25Q5T742 122 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms