RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 MIEN1Q9BRT3 115 aa4.22□□□□□ -1.73
LIMD1-204ENST00000474665 TMEM126AQ9H061 195 aa4.22□□□□□ -1.73
LIMD1-204ENST00000474665 ZNF861PO60384 105 aa4.21□□□□□ -1.74
LIMD1-204ENST00000474665 DDTP30046 118 aa4.21□□□□□ -1.74
LIMD1-204ENST00000474665 SLC25A34Q6PIV7 304 aa4.21□□□□□ -1.74
LIMD1-204ENST00000474665 REG3GQ6UW15 175 aa4.21□□□□□ -1.74
LIMD1-204ENST00000474665 SPINK6Q6UWN8 80 aa4.21□□□□□ -1.74
LIMD1-204ENST00000474665 HIGD1BQ9P298 99 aa4.21□□□□□ -1.74
LIMD1-204ENST00000474665 A4D1N5 150 aa4.2□□□□□ -1.74
LIMD1-204ENST00000474665 PRYO14603 147 aa4.2□□□□□ -1.74
LIMD1-204ENST00000474665 KRTAP1-4P0C5Y4 121 aa4.2□□□□□ -1.74
LIMD1-204ENST00000474665 SMIM6P0DI80 62 aa4.2□□□□□ -1.74
LIMD1-204ENST00000474665 PRLHP81277 87 aa4.2□□□□□ -1.74
LIMD1-204ENST00000474665 H0Y9J4 135 aa4.19□□□□□ -1.74
LIMD1-204ENST00000474665 B5MCH6 92 aa4.18□□□□□ -1.74
LIMD1-204ENST00000474665 S100A7L2Q5SY68 101 aa4.18□□□□□ -1.74
LIMD1-204ENST00000474665 FAM19A1Q7Z5A9 133 aa4.18□□□□□ -1.74
LIMD1-204ENST00000474665 LINC00518Q8N0U6 118 aa4.18□□□□□ -1.74
LIMD1-204ENST00000474665 DIRC1Q969H9 104 aa4.18□□□□□ -1.74
LIMD1-204ENST00000474665 HIST1H4GQ99525 98 aa4.18□□□□□ -1.74
LIMD1-204ENST00000474665 Q9BRP9 147 aa4.18□□□□□ -1.74
LIMD1-204ENST00000474665 PRO1933Q9H354 126 aa4.18□□□□□ -1.74
LIMD1-204ENST00000474665 TRAV23DV6A0A075B6W5 121 aa4.17□□□□□ -1.74
LIMD1-204ENST00000474665 ZNF73O43830 326 aaPredicted RBP4.17□□□□□ -1.74
LIMD1-204ENST00000474665 ERC2-IT1O76042 136 aa4.17□□□□□ -1.74
LIMD1-204ENST00000474665 RPL28P46779 137 aaKnown RBP4.17□□□□□ -1.74
LIMD1-204ENST00000474665 FXYD2P54710 66 aa4.17□□□□□ -1.74
LIMD1-204ENST00000474665 OR13C6PQ8NH95 151 aa4.17□□□□□ -1.74
LIMD1-204ENST00000474665 SMCR5Q8TEV8 140 aa4.17□□□□□ -1.74
LIMD1-204ENST00000474665 LINC01600Q96MT4 127 aa4.17□□□□□ -1.74
LIMD1-204ENST00000474665 C12orf57Q99622 126 aa4.17□□□□□ -1.74
LIMD1-204ENST00000474665 UQCR10Q9UDW1 63 aa4.17□□□□□ -1.74
LIMD1-204ENST00000474665 CFC1BP0CG36 223 aa4.16□□□□□ -1.74
LIMD1-204ENST00000474665 CFC1P0CG37 223 aa4.16□□□□□ -1.74
LIMD1-204ENST00000474665 UBE2AP49459 152 aa4.16□□□□□ -1.74
LIMD1-204ENST00000474665 KRTAP10-8P60410 259 aa4.16□□□□□ -1.74
LIMD1-204ENST00000474665 S100A12P80511 92 aa4.16□□□□□ -1.74
LIMD1-204ENST00000474665 TAL2Q16559 108 aa4.16□□□□□ -1.74
LIMD1-204ENST00000474665 Q6ZRX8 168 aa4.16□□□□□ -1.74
LIMD1-204ENST00000474665 CEND1Q8N111 149 aa4.16□□□□□ -1.74
LIMD1-204ENST00000474665 COPS9Q8WXC6 57 aa4.16□□□□□ -1.74
LIMD1-204ENST00000474665 ANAPC11Q9NYG5 84 aa4.16□□□□□ -1.74
LIMD1-204ENST00000474665 A0A0U1RQV1 116 aa4.15□□□□□ -1.75
LIMD1-204ENST00000474665 ETDCA0A1B0GVM5 59 aa4.15□□□□□ -1.75
LIMD1-204ENST00000474665 A6NDN8 102 aa4.15□□□□□ -1.75
LIMD1-204ENST00000474665 SMIM11BQ8TCY0 68 aa4.15□□□□□ -1.75
LIMD1-204ENST00000474665 HIGD2AQ9BW72 106 aa4.15□□□□□ -1.75
LIMD1-204ENST00000474665 LPAP08519 4548 aa4.15□□□□□ -1.75
LIMD1-204ENST00000474665 A0A087X002 238 aa4.14□□□□□ -1.75
LIMD1-204ENST00000474665 TRAV13-2A0A0B4J235 113 aa4.14□□□□□ -1.75
LIMD1-204ENST00000474665 HSD52Q0P140 79 aa4.14□□□□□ -1.75
LIMD1-204ENST00000474665 C6orf99Q4VX62 202 aa4.14□□□□□ -1.75
LIMD1-204ENST00000474665 LCE2DQ5TA82 110 aaPredicted RBP4.14□□□□□ -1.75
LIMD1-204ENST00000474665 PRR26Q8N8Z3 221 aa4.14□□□□□ -1.75
LIMD1-204ENST00000474665 A0A0B4J2C4 111 aa4.13□□□□□ -1.75
LIMD1-204ENST00000474665 RPL13AP40429 203 aaKnown RBP4.13□□□□□ -1.75
LIMD1-204ENST00000474665 ELOF1P60002 83 aaKnown RBP4.13□□□□□ -1.75
LIMD1-204ENST00000474665 KRTAP13-2Q52LG2 175 aa4.13□□□□□ -1.75
LIMD1-204ENST00000474665 SPRR4Q96PI1 79 aa4.13□□□□□ -1.75
LIMD1-204ENST00000474665 TRBV7-6A0A0J9YX20 115 aa4.12□□□□□ -1.75
LIMD1-204ENST00000474665 A0A1B0GWB2 263 aa4.12□□□□□ -1.75
LIMD1-204ENST00000474665 KRTAP9-7A8MTY7 169 aa4.12□□□□□ -1.75
LIMD1-204ENST00000474665 K7ERJ3 54 aa4.12□□□□□ -1.75
LIMD1-204ENST00000474665 BVES-AS1Q5T3Y7 98 aa4.12□□□□□ -1.75
LIMD1-204ENST00000474665 ST20-AS1Q8NBB2 130 aa4.12□□□□□ -1.75
LIMD1-204ENST00000474665 COX7BP24311 80 aa4.11□□□□□ -1.75
LIMD1-204ENST00000474665 CTAG1AP78358 180 aa4.11□□□□□ -1.75
LIMD1-204ENST00000474665 LINC00483Q53H64 154 aa4.11□□□□□ -1.75
LIMD1-204ENST00000474665 H7C2G1 150 aa4.1□□□□□ -1.75
LIMD1-204ENST00000474665 FAM229BQ4G0N7 80 aa4.1□□□□□ -1.75
LIMD1-204ENST00000474665 NHP2Q9NX24 153 aaKnown RBP4.1□□□□□ -1.75
LIMD1-204ENST00000474665 PRO1854Q9UHT4 67 aa4.1□□□□□ -1.75
LIMD1-204ENST00000474665 CBY1Q9Y3M2 126 aa4.1□□□□□ -1.75
LIMD1-204ENST00000474665 LINC01547P58512 204 aaPredicted RBP4.09□□□□□ -1.75
LIMD1-204ENST00000474665 GAGE2AQ6NT46 116 aa4.09□□□□□ -1.75
LIMD1-204ENST00000474665 LINC00575Q6W349 94 aa4.09□□□□□ -1.75
LIMD1-204ENST00000474665 C3orf22Q8N5N4 141 aa4.09□□□□□ -1.75
LIMD1-204ENST00000474665 RAB37Q96AX2 223 aa4.09□□□□□ -1.75
LIMD1-204ENST00000474665 FAM218AQ96MZ4 157 aa4.09□□□□□ -1.75
LIMD1-204ENST00000474665 DHRS4-AS1Q9P1J3 65 aa4.09□□□□□ -1.75
LIMD1-204ENST00000474665 TMEM238LA0A1B0GVL6 79 aa4.08□□□□□ -1.76
LIMD1-204ENST00000474665 A6NJY4 79 aa4.08□□□□□ -1.76
LIMD1-204ENST00000474665 TSTD3H0UI37 97 aa4.08□□□□□ -1.76
LIMD1-204ENST00000474665 CRYGAP11844 174 aa4.08□□□□□ -1.76
LIMD1-204ENST00000474665 SPRR1BP22528 89 aa4.08□□□□□ -1.76
LIMD1-204ENST00000474665 HINT1P49773 126 aaPredicted RBP4.08□□□□□ -1.76
LIMD1-204ENST00000474665 IGLV5-48A0A075B6I7 105 aa4.07□□□□□ -1.76
LIMD1-204ENST00000474665 TRIAP1O43715 76 aa4.07□□□□□ -1.76
LIMD1-204ENST00000474665 TSPAN13O95857 204 aa4.07□□□□□ -1.76
LIMD1-204ENST00000474665 ZNF706Q9Y5V0 76 aaPredicted RBP4.07□□□□□ -1.76
LIMD1-204ENST00000474665 SMIM29Q86T20 159 aa4.06□□□□□ -1.76
LIMD1-204ENST00000474665 Q8N377 158 aa4.06□□□□□ -1.76
LIMD1-204ENST00000474665 VAMP3Q15836 100 aa4.05□□□□□ -1.76
LIMD1-204ENST00000474665 TYMSOSQ8TAI1 123 aa4.05□□□□□ -1.76
LIMD1-204ENST00000474665 hADV29S1A0JD25 119 aa4.04□□□□□ -1.76
LIMD1-204ENST00000474665 M0R143 59 aa4.04□□□□□ -1.76
LIMD1-204ENST00000474665 Q1RN00 199 aa4.04□□□□□ -1.76
LIMD1-204ENST00000474665 Q6ZQY7 126 aa4.04□□□□□ -1.76
LIMD1-204ENST00000474665 DEFB105AQ8NG35 78 aa4.04□□□□□ -1.76
LIMD1-204ENST00000474665 CLEC2BQ92478 149 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms