RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 SYCNQ0VAF6 134 aa3.92□□□□□ -1.78
ATPAF1-204ENST00000474020 ESRGQ1W209 222 aa3.92□□□□□ -1.78
ATPAF1-204ENST00000474020 HIGD2BQ4VC39 106 aa3.92□□□□□ -1.78
ATPAF1-204ENST00000474020 LINC00575Q6W349 94 aa3.92□□□□□ -1.78
ATPAF1-204ENST00000474020 SDIM1Q6ZPB5 146 aa3.92□□□□□ -1.78
ATPAF1-204ENST00000474020 C6orf223Q8N319 242 aa3.92□□□□□ -1.78
ATPAF1-204ENST00000474020 NKAPP1Q8N9T2 125 aa3.92□□□□□ -1.78
ATPAF1-204ENST00000474020 OBSCN-AS1Q96MR7 158 aa3.92□□□□□ -1.78
ATPAF1-204ENST00000474020 C6orf48Q9UBA6 75 aa3.92□□□□□ -1.78
ATPAF1-204ENST00000474020 LAMTOR3Q9UHA4 124 aa3.92□□□□□ -1.78
ATPAF1-204ENST00000474020 ANK3Q12955 4377 aaKnown RBP3.92□□□□□ -1.78
ATPAF1-204ENST00000474020 ZNF73O43830 326 aaPredicted RBP3.91□□□□□ -1.78
ATPAF1-204ENST00000474020 CCKP06307 115 aa3.91□□□□□ -1.78
ATPAF1-204ENST00000474020 DNAH10OSP0CZ25 163 aa3.91□□□□□ -1.78
ATPAF1-204ENST00000474020 PRR3P79522 188 aaKnown RBP3.91□□□□□ -1.78
ATPAF1-204ENST00000474020 Q6JHZ5 121 aa3.91□□□□□ -1.78
ATPAF1-204ENST00000474020 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.91□□□□□ -1.78
ATPAF1-204ENST00000474020 LINC00526Q96FQ7 95 aa3.91□□□□□ -1.78
ATPAF1-204ENST00000474020 DSCR8Q96T75 97 aa3.91□□□□□ -1.78
ATPAF1-204ENST00000474020 UBL5Q9BZL1 73 aa3.91□□□□□ -1.78
ATPAF1-204ENST00000474020 TRBV10-3A0A0K0K1G6 114 aa3.9□□□□□ -1.79
ATPAF1-204ENST00000474020 RBM3P98179 157 aaKnown RBP3.9□□□□□ -1.79
ATPAF1-204ENST00000474020 Q6ZRU5 148 aa3.9□□□□□ -1.79
ATPAF1-204ENST00000474020 MRAPQ8TCY5 172 aa3.9□□□□□ -1.79
ATPAF1-204ENST00000474020 XAGE1AQ9HD64 81 aa3.9□□□□□ -1.79
ATPAF1-204ENST00000474020 FAM236AA0A1B0GUQ0 79 aa3.89□□□□□ -1.79
ATPAF1-204ENST00000474020 FAM236BA0A1B0GV22 79 aa3.89□□□□□ -1.79
ATPAF1-204ENST00000474020 ATOX1O00244 68 aa3.89□□□□□ -1.79
ATPAF1-204ENST00000474020 TM2D3Q9BRN9 247 aa3.89□□□□□ -1.79
ATPAF1-204ENST00000474020 PKIGQ9Y2B9 76 aa3.89□□□□□ -1.79
ATPAF1-204ENST00000474020 ANK2Q01484 3957 aa3.88□□□□□ -1.79
ATPAF1-204ENST00000474020 LOC110117498A0A087WWA1 95 aa3.88□□□□□ -1.79
ATPAF1-204ENST00000474020 VPREB1P12018 145 aa3.88□□□□□ -1.79
ATPAF1-204ENST00000474020 ELOF1P60002 83 aaKnown RBP3.88□□□□□ -1.79
ATPAF1-204ENST00000474020 Q6ZQY7 126 aa3.88□□□□□ -1.79
ATPAF1-204ENST00000474020 UBE2DNLQ8IWF7 75 aa3.88□□□□□ -1.79
ATPAF1-204ENST00000474020 C15orf56Q8N910 161 aa3.88□□□□□ -1.79
ATPAF1-204ENST00000474020 KRTAP10-6P60371 365 aaPredicted RBP3.87□□□□□ -1.79
ATPAF1-204ENST00000474020 KRTAP26-1Q6PEX3 210 aa3.87□□□□□ -1.79
ATPAF1-204ENST00000474020 UPK3BQ9BT76 320 aa3.87□□□□□ -1.79
ATPAF1-204ENST00000474020 C22orf24Q9Y442 160 aa3.87□□□□□ -1.79
ATPAF1-204ENST00000474020 LOC107984640A0A0U1RRK4 108 aa3.86□□□□□ -1.79
ATPAF1-204ENST00000474020 USP17L23D6RBM5 183 aa3.86□□□□□ -1.79
ATPAF1-204ENST00000474020 PSCAO43653 123 aa3.86□□□□□ -1.79
ATPAF1-204ENST00000474020 TLX1NBP0CAT3 122 aa3.86□□□□□ -1.79
ATPAF1-204ENST00000474020 HIST1H4AP62805 103 aaKnown RBP3.86□□□□□ -1.79
ATPAF1-204ENST00000474020 C14orf177Q52M58 125 aa3.86□□□□□ -1.79
ATPAF1-204ENST00000474020 SMCR5Q8TEV8 140 aa3.86□□□□□ -1.79
ATPAF1-204ENST00000474020 LINC00846Q9NV44 126 aa3.86□□□□□ -1.79
ATPAF1-204ENST00000474020 DHRS4-AS1Q9P1J3 65 aa3.86□□□□□ -1.79
ATPAF1-204ENST00000474020 LINC00588Q9Y4M8 146 aa3.86□□□□□ -1.79
ATPAF1-204ENST00000474020 IGKV3D-7A0A0C4DH55 119 aa3.85□□□□□ -1.79
ATPAF1-204ENST00000474020 ETDCA0A1B0GVM5 59 aa3.85□□□□□ -1.79
ATPAF1-204ENST00000474020 K7EIL1 84 aa3.85□□□□□ -1.79
ATPAF1-204ENST00000474020 UQCRQO14949 82 aa3.85□□□□□ -1.79
ATPAF1-204ENST00000474020 Q6ZQT0 140 aa3.85□□□□□ -1.79
ATPAF1-204ENST00000474020 KCNQ1DNQ9H478 68 aa3.85□□□□□ -1.79
ATPAF1-204ENST00000474020 MGAM2Q2M2H8 2515 aa3.84□□□□□ -1.79
ATPAF1-204ENST00000474020 IGLV5-37A0A075B6J1 123 aa3.84□□□□□ -1.79
ATPAF1-204ENST00000474020 C9orf153Q5TBE3 101 aa3.84□□□□□ -1.79
ATPAF1-204ENST00000474020 Q6ZRP5 223 aa3.84□□□□□ -1.79
ATPAF1-204ENST00000474020 Q8NDZ9 215 aa3.84□□□□□ -1.79
ATPAF1-204ENST00000474020 PRB2P02812 416 aaPredicted RBP3.83□□□□□ -1.8
ATPAF1-204ENST00000474020 MT3P25713 68 aa3.83□□□□□ -1.8
ATPAF1-204ENST00000474020 C9orf129Q5T035 196 aaKnown RBP3.83□□□□□ -1.8
ATPAF1-204ENST00000474020 SMIM20Q8N5G0 67 aa3.83□□□□□ -1.8
ATPAF1-204ENST00000474020 C3orf22Q8N5N4 141 aa3.83□□□□□ -1.8
ATPAF1-204ENST00000474020 C7orf33Q8WU49 177 aa3.83□□□□□ -1.8
ATPAF1-204ENST00000474020 NUPR2A6NF83 97 aa3.82□□□□□ -1.8
ATPAF1-204ENST00000474020 F8WEM9 126 aa3.82□□□□□ -1.8
ATPAF1-204ENST00000474020 CCDC179H3BU77 68 aa3.82□□□□□ -1.8
ATPAF1-204ENST00000474020 COX7CP15954 63 aa3.82□□□□□ -1.8
ATPAF1-204ENST00000474020 HAMPP81172 84 aa3.82□□□□□ -1.8
ATPAF1-204ENST00000474020 A0A1B0GW54 56 aa3.81□□□□□ -1.8
ATPAF1-204ENST00000474020 BCE1O60756 84 aa3.81□□□□□ -1.8
ATPAF1-204ENST00000474020 FUSP35637 526 aaKnown RBP eCLIP3.81□□□□□ -1.8
ATPAF1-204ENST00000474020 CXCL6P80162 114 aa3.81□□□□□ -1.8
ATPAF1-204ENST00000474020 MRPL55Q7Z7F7 128 aaKnown RBP3.81□□□□□ -1.8
ATPAF1-204ENST00000474020 SERP2Q8N6R1 65 aa3.81□□□□□ -1.8
ATPAF1-204ENST00000474020 B9D2Q9BPU9 175 aa3.81□□□□□ -1.8
ATPAF1-204ENST00000474020 TENM1Q9UKZ4 2725 aa3.8□□□□□ -1.8
ATPAF1-204ENST00000474020 TRBV7-4A0A0J9YYF1 115 aa3.8□□□□□ -1.8
ATPAF1-204ENST00000474020 UBE2BP63146 152 aa3.8□□□□□ -1.8
ATPAF1-204ENST00000474020 Q6ZRX8 168 aa3.8□□□□□ -1.8
ATPAF1-204ENST00000474020 Q6ZVQ6 151 aa3.8□□□□□ -1.8
ATPAF1-204ENST00000474020 FAM19A5Q7Z5A7 132 aaPredicted RBP3.8□□□□□ -1.8
ATPAF1-204ENST00000474020 PRR26Q8N8Z3 221 aa3.8□□□□□ -1.8
ATPAF1-204ENST00000474020 KMT2CQ8NEZ4 4911 aaKnown RBP3.79□□□□□ -1.8
ATPAF1-204ENST00000474020 IGLV1-50A0A075B6I6 118 aa3.79□□□□□ -1.8
ATPAF1-204ENST00000474020 RPL37AP8A6NKH3 93 aa3.79□□□□□ -1.8
ATPAF1-204ENST00000474020 LINC01547P58512 204 aaPredicted RBP3.79□□□□□ -1.8
ATPAF1-204ENST00000474020 CNBPP62633 177 aaKnown RBP3.79□□□□□ -1.8
ATPAF1-204ENST00000474020 NREPQ16612 68 aa3.79□□□□□ -1.8
ATPAF1-204ENST00000474020 SERTAD4-AS1Q5TG53 156 aa3.79□□□□□ -1.8
ATPAF1-204ENST00000474020 REG3GQ6UW15 175 aa3.79□□□□□ -1.8
ATPAF1-204ENST00000474020 DEFB105AQ8NG35 78 aa3.79□□□□□ -1.8
ATPAF1-204ENST00000474020 LINC00474Q9P2X8 69 aa3.79□□□□□ -1.8
ATPAF1-204ENST00000474020 SS18L2Q9UHA2 77 aa3.79□□□□□ -1.8
ATPAF1-204ENST00000474020 RYR3Q15413 4870 aa3.79□□□□□ -1.8
ATPAF1-204ENST00000474020 C16orf90A8MZG2 172 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms