RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 Q1RN00 199 aa10.42□□□□□ -0.74
CCM2-205ENST00000472223 FAM19A1Q7Z5A9 133 aa10.42□□□□□ -0.74
CCM2-205ENST00000472223 KRTAP11-1Q8IUC1 163 aa10.42□□□□□ -0.74
CCM2-205ENST00000472223 DIRC1Q969H9 104 aa10.42□□□□□ -0.74
CCM2-205ENST00000472223 PRO1854Q9UHT4 67 aa10.42□□□□□ -0.74
CCM2-205ENST00000472223 BIRC6Q9NR09 4857 aa10.41□□□□□ -0.74
CCM2-205ENST00000472223 RPL28P46779 137 aaKnown RBP10.41□□□□□ -0.74
CCM2-205ENST00000472223 VAMP3Q15836 100 aa10.41□□□□□ -0.74
CCM2-205ENST00000472223 H7C2G1 150 aa10.4□□□□□ -0.74
CCM2-205ENST00000472223 IGLV7-43P04211 117 aa10.4□□□□□ -0.74
CCM2-205ENST00000472223 RYR1P21817 5038 aa10.38□□□□□ -0.75
CCM2-205ENST00000472223 KIAA1109Q2LD37 5005 aa10.38□□□□□ -0.75
CCM2-205ENST00000472223 BATFQ16520 125 aa10.38□□□□□ -0.75
CCM2-205ENST00000472223 SMIM11BQ8TCY0 68 aa10.38□□□□□ -0.75
CCM2-205ENST00000472223 HSPG2P98160 4391 aa10.37□□□□□ -0.75
CCM2-205ENST00000472223 SPRR1AP35321 89 aa10.37□□□□□ -0.75
CCM2-205ENST00000472223 C6orf99Q4VX62 202 aa10.37□□□□□ -0.75
CCM2-205ENST00000472223 PCP4L1A6NKN8 68 aa10.36□□□□□ -0.75
CCM2-205ENST00000472223 ZNF861PO60384 105 aa10.36□□□□□ -0.75
CCM2-205ENST00000472223 TRBV7-6A0A0J9YX20 115 aa10.35□□□□□ -0.75
CCM2-205ENST00000472223 H0Y9J4 135 aa10.35□□□□□ -0.75
CCM2-205ENST00000472223 COX7BP24311 80 aa10.35□□□□□ -0.75
CCM2-205ENST00000472223 A0A1B0GWB2 263 aa10.34□□□□□ -0.75
CCM2-205ENST00000472223 PSMB2P49721 201 aa10.34□□□□□ -0.75
CCM2-205ENST00000472223 PRLHP81277 87 aa10.34□□□□□ -0.75
CCM2-205ENST00000472223 SPINK6Q6UWN8 80 aa10.34□□□□□ -0.75
CCM2-205ENST00000472223 B5MCH6 92 aa10.33□□□□□ -0.76
CCM2-205ENST00000472223 K7ERJ3 54 aa10.33□□□□□ -0.76
CCM2-205ENST00000472223 SNCGO76070 127 aa10.33□□□□□ -0.76
CCM2-205ENST00000472223 SLC25A20O43772 301 aa10.32□□□□□ -0.76
CCM2-205ENST00000472223 COX6CP09669 75 aa10.32□□□□□ -0.76
CCM2-205ENST00000472223 Q6ZRX8 168 aa10.32□□□□□ -0.76
CCM2-205ENST00000472223 HIGD2AQ9BW72 106 aa10.32□□□□□ -0.76
CCM2-205ENST00000472223 KRTAP4-16G5E9R7 235 aaPredicted RBP10.31□□□□□ -0.76
CCM2-205ENST00000472223 DHRS4-AS1Q9P1J3 65 aa10.31□□□□□ -0.76
CCM2-205ENST00000472223 ELOF1P60002 83 aaKnown RBP10.3□□□□□ -0.76
CCM2-205ENST00000472223 H0YGX0 51 aa10.29□□□□□ -0.76
CCM2-205ENST00000472223 INAFM2P0DMQ5 153 aa10.29□□□□□ -0.76
CCM2-205ENST00000472223 VPS13BQ7Z7G8 4022 aa10.29□□□□□ -0.76
CCM2-205ENST00000472223 KRTAP10-4P60372 401 aaPredicted RBP10.28□□□□□ -0.76
CCM2-205ENST00000472223 KRTAP13-1Q8IUC0 172 aa10.27□□□□□ -0.77
CCM2-205ENST00000472223 ZNF706Q9Y5V0 76 aaPredicted RBP10.27□□□□□ -0.77
CCM2-205ENST00000472223 FAT1Q14517 4588 aa10.27□□□□□ -0.77
CCM2-205ENST00000472223 TSPAN13O95857 204 aa10.26□□□□□ -0.77
CCM2-205ENST00000472223 SCGB1C2P0DMR2 95 aa10.26□□□□□ -0.77
CCM2-205ENST00000472223 SMCR5Q8TEV8 140 aa10.26□□□□□ -0.77
CCM2-205ENST00000472223 SRRM2Q9UQ35 2752 aaKnown RBP10.25□□□□□ -0.77
CCM2-205ENST00000472223 TRIAP1O43715 76 aa10.23□□□□□ -0.77
CCM2-205ENST00000472223 Q9BRP9 147 aa10.23□□□□□ -0.77
CCM2-205ENST00000472223 hADV29S1A0JD25 119 aa10.22□□□□□ -0.77
CCM2-205ENST00000472223 COL5A1-AS1Q5SY13 56 aa10.22□□□□□ -0.77
CCM2-205ENST00000472223 LYRM7Q5U5X0 104 aa10.22□□□□□ -0.77
CCM2-205ENST00000472223 SNHG12Q9BXW3 62 aa10.22□□□□□ -0.77
CCM2-205ENST00000472223 LINC00575Q6W349 94 aa10.21□□□□□ -0.77
CCM2-205ENST00000472223 KRTAP17-1Q9BYP8 105 aa10.21□□□□□ -0.77
CCM2-205ENST00000472223 A0A1B0GX51 115 aa10.18□□□□□ -0.78
CCM2-205ENST00000472223 GHRHP01286 108 aa10.18□□□□□ -0.78
CCM2-205ENST00000472223 DNAL4O96015 105 aa10.17□□□□□ -0.78
CCM2-205ENST00000472223 HERC2O95714 4834 aa10.17□□□□□ -0.78
CCM2-205ENST00000472223 C9orf118A6NHY6 69 aa10.16□□□□□ -0.78
CCM2-205ENST00000472223 H3BUT2 72 aa10.16□□□□□ -0.78
CCM2-205ENST00000472223 ERC2-IT1O76042 136 aa10.16□□□□□ -0.78
CCM2-205ENST00000472223 GAGE2AQ6NT46 116 aa10.16□□□□□ -0.78
CCM2-205ENST00000472223 KRTAP4-5Q9BYR2 181 aa10.16□□□□□ -0.78
CCM2-205ENST00000472223 DEFB105AQ8NG35 78 aa10.15□□□□□ -0.78
CCM2-205ENST00000472223 SPRR4Q96PI1 79 aa10.15□□□□□ -0.78
CCM2-205ENST00000472223 TAX1BP3O14907 124 aa10.14□□□□□ -0.79
CCM2-205ENST00000472223 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.14□□□□□ -0.79
CCM2-205ENST00000472223 CLEC2BQ92478 149 aa10.14□□□□□ -0.79
CCM2-205ENST00000472223 NAA38Q9BRA0 125 aaKnown RBP10.14□□□□□ -0.79
CCM2-205ENST00000472223 OCIAD2Q56VL3 154 aa10.13□□□□□ -0.79
CCM2-205ENST00000472223 TEX49A0A1B0GTD5 131 aa10.12□□□□□ -0.79
CCM2-205ENST00000472223 FABP2P12104 132 aa10.12□□□□□ -0.79
CCM2-205ENST00000472223 Q6ZQY7 126 aa10.12□□□□□ -0.79
CCM2-205ENST00000472223 ST20-AS1Q8NBB2 130 aa10.12□□□□□ -0.79
CCM2-205ENST00000472223 TRBV20-1A0A075B6N2 111 aa10.11□□□□□ -0.79
CCM2-205ENST00000472223 CRYGAP11844 174 aa10.11□□□□□ -0.79
CCM2-205ENST00000472223 ATXN8Q156A1 80 aa10.11□□□□□ -0.79
CCM2-205ENST00000472223 FAM229BQ4G0N7 80 aa10.11□□□□□ -0.79
CCM2-205ENST00000472223 FAM218AQ96MZ4 157 aa10.11□□□□□ -0.79
CCM2-205ENST00000472223 H3BQ85 93 aa10.1□□□□□ -0.79
CCM2-205ENST00000472223 OXTP01178 125 aa10.09□□□□□ -0.79
CCM2-205ENST00000472223 LAMTOR3Q9UHA4 124 aa10.09□□□□□ -0.79
CCM2-205ENST00000472223 PKHD1L1Q86WI1 4243 aa10.09□□□□□ -0.79
CCM2-205ENST00000472223 A0A1W2PPM0 123 aa10.08□□□□□ -0.8
CCM2-205ENST00000472223 LST1O00453 97 aa10.08□□□□□ -0.8
CCM2-205ENST00000472223 TRACP01848 142 aa10.08□□□□□ -0.8
CCM2-205ENST00000472223 LINC00483Q53H64 154 aa10.08□□□□□ -0.8
CCM2-205ENST00000472223 PPDPFLQ8WWR9 84 aa10.08□□□□□ -0.8
CCM2-205ENST00000472223 KRTAP1-4P0C5Y4 121 aa10.07□□□□□ -0.8
CCM2-205ENST00000472223 LINC01600Q96MT4 127 aa10.07□□□□□ -0.8
CCM2-205ENST00000472223 ANAPC11Q9NYG5 84 aa10.07□□□□□ -0.8
CCM2-205ENST00000472223 ORMDL1Q9P0S3 153 aa10.07□□□□□ -0.8
CCM2-205ENST00000472223 IGLV5-48A0A075B6I7 105 aa10.06□□□□□ -0.8
CCM2-205ENST00000472223 TCL1BO95988 128 aa10.05□□□□□ -0.8
CCM2-205ENST00000472223 SPRR1BP22528 89 aa10.05□□□□□ -0.8
CCM2-205ENST00000472223 F8WEM9 126 aa10.04□□□□□ -0.8
CCM2-205ENST00000472223 PRR26Q8N8Z3 221 aa10.03□□□□□ -0.8
CCM2-205ENST00000472223 TYMSOSQ8TAI1 123 aa10.03□□□□□ -0.8
CCM2-205ENST00000472223 IGLV9-49A0A0B4J1Y8 123 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms