RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 LYRM7Q5U5X0 104 aa3.3□□□□□ -1.88
HDAC3-206ENST00000471968 Q6ZUT4 128 aa3.3□□□□□ -1.88
HDAC3-206ENST00000471968 RAB37Q96AX2 223 aa3.3□□□□□ -1.88
HDAC3-206ENST00000471968 A0A1B0GWB2 263 aa3.29□□□□□ -1.88
HDAC3-206ENST00000471968 M0QY20 66 aa3.29□□□□□ -1.88
HDAC3-206ENST00000471968 HBDP02042 147 aa3.29□□□□□ -1.88
HDAC3-206ENST00000471968 LCE1AQ5T7P2 110 aa3.29□□□□□ -1.88
HDAC3-206ENST00000471968 CEND1Q8N111 149 aa3.29□□□□□ -1.88
HDAC3-206ENST00000471968 C20orf166-AS1Q96NR2 134 aa3.29□□□□□ -1.88
HDAC3-206ENST00000471968 ANAPC13Q9BS18 74 aa3.29□□□□□ -1.88
HDAC3-206ENST00000471968 C6orf48Q9UBA6 75 aa3.29□□□□□ -1.88
HDAC3-206ENST00000471968 PRO0461Q9UI25 63 aa3.29□□□□□ -1.88
HDAC3-206ENST00000471968 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.28□□□□□ -1.88
HDAC3-206ENST00000471968 IGKV2-29A2NJV5 120 aaPredicted RBP3.28□□□□□ -1.88
HDAC3-206ENST00000471968 SDHAF1A6NFY7 115 aa3.28□□□□□ -1.88
HDAC3-206ENST00000471968 RPL37AP8A6NKH3 93 aa3.28□□□□□ -1.88
HDAC3-206ENST00000471968 I3L3M4 83 aa3.28□□□□□ -1.88
HDAC3-206ENST00000471968 NDUFA1O15239 70 aa3.28□□□□□ -1.88
HDAC3-206ENST00000471968 NCR2O95944 276 aa3.28□□□□□ -1.88
HDAC3-206ENST00000471968 NMUP48645 174 aa3.28□□□□□ -1.88
HDAC3-206ENST00000471968 FXYD2P54710 66 aa3.28□□□□□ -1.88
HDAC3-206ENST00000471968 RPS29P62273 56 aaKnown RBP3.28□□□□□ -1.88
HDAC3-206ENST00000471968 RPL32P62910 135 aaKnown RBP3.28□□□□□ -1.88
HDAC3-206ENST00000471968 ETDBQ3ZM63 59 aa3.28□□□□□ -1.88
HDAC3-206ENST00000471968 KRTAP5-10Q6L8G5 202 aa3.28□□□□□ -1.88
HDAC3-206ENST00000471968 PPDPFLQ8WWR9 84 aa3.28□□□□□ -1.88
HDAC3-206ENST00000471968 IFI27L1Q96BM0 104 aa3.28□□□□□ -1.88
HDAC3-206ENST00000471968 NAA38Q9BRA0 125 aaKnown RBP3.28□□□□□ -1.88
HDAC3-206ENST00000471968 SS18L2Q9UHA2 77 aa3.28□□□□□ -1.88
HDAC3-206ENST00000471968 A0A096LNJ9 63 aa3.27□□□□□ -1.89
HDAC3-206ENST00000471968 LINC01546A6NGU7 62 aa3.27□□□□□ -1.89
HDAC3-206ENST00000471968 ATP5LO75964 103 aa3.27□□□□□ -1.89
HDAC3-206ENST00000471968 IGLV6-57P01721 117 aa3.27□□□□□ -1.89
HDAC3-206ENST00000471968 CKS2P33552 79 aa3.27□□□□□ -1.89
HDAC3-206ENST00000471968 HERV-K104P63124 156 aa3.27□□□□□ -1.89
HDAC3-206ENST00000471968 PRLHP81277 87 aa3.27□□□□□ -1.89
HDAC3-206ENST00000471968 UNQ6190/PRO20217Q6UXQ8 127 aa3.27□□□□□ -1.89
HDAC3-206ENST00000471968 MRPL55Q7Z7F7 128 aaKnown RBP3.27□□□□□ -1.89
HDAC3-206ENST00000471968 TEN1Q86WV5 123 aa3.27□□□□□ -1.89
HDAC3-206ENST00000471968 PCP2Q8IVA1 136 aa3.27□□□□□ -1.89
HDAC3-206ENST00000471968 ORMDL3Q8N138 153 aa3.27□□□□□ -1.89
HDAC3-206ENST00000471968 PLEKHB2Q96CS7 222 aa3.27□□□□□ -1.89
HDAC3-206ENST00000471968 CNFNQ9BYD5 112 aa3.27□□□□□ -1.89
HDAC3-206ENST00000471968 NHP2Q9NX24 153 aaKnown RBP3.27□□□□□ -1.89
HDAC3-206ENST00000471968 TRBV20-1A0A075B6N2 111 aa3.26□□□□□ -1.89
HDAC3-206ENST00000471968 H7C423 109 aa3.26□□□□□ -1.89
HDAC3-206ENST00000471968 K7ERJ3 54 aa3.26□□□□□ -1.89
HDAC3-206ENST00000471968 VCYO14598 125 aa3.26□□□□□ -1.89
HDAC3-206ENST00000471968 MT-ATP8P03928 68 aa3.26□□□□□ -1.89
HDAC3-206ENST00000471968 C5orf38Q86SI9 138 aa3.26□□□□□ -1.89
HDAC3-206ENST00000471968 AMN1Q8IY45 258 aa3.26□□□□□ -1.89
HDAC3-206ENST00000471968 Q8N9P0 234 aaPredicted RBP3.26□□□□□ -1.89
HDAC3-206ENST00000471968 RPL39LQ96EH5 51 aaKnown RBP3.26□□□□□ -1.89
HDAC3-206ENST00000471968 PRELID3AQ96N28 172 aa3.26□□□□□ -1.89
HDAC3-206ENST00000471968 C20orf78Q9BR46 151 aa3.26□□□□□ -1.89
HDAC3-206ENST00000471968 SPANXDQ9BXN6 97 aa3.26□□□□□ -1.89
HDAC3-206ENST00000471968 TMEM126AQ9H061 195 aa3.26□□□□□ -1.89
HDAC3-206ENST00000471968 SPANXCQ9NY87 97 aa3.26□□□□□ -1.89
HDAC3-206ENST00000471968 B5MCH6 92 aa3.25□□□□□ -1.89
HDAC3-206ENST00000471968 DPM2O94777 84 aa3.25□□□□□ -1.89
HDAC3-206ENST00000471968 IGKCP01834 107 aa3.25□□□□□ -1.89
HDAC3-206ENST00000471968 IFI27P40305 119 aaPredicted RBP3.25□□□□□ -1.89
HDAC3-206ENST00000471968 SUMO2P61956 95 aaKnown RBP3.25□□□□□ -1.89
HDAC3-206ENST00000471968 MAP1LC3AQ9H492 121 aa3.25□□□□□ -1.89
HDAC3-206ENST00000471968 TRBV6-5A0A0K0K1A5 114 aa3.24□□□□□ -1.89
HDAC3-206ENST00000471968 NDUFC2-KCTD14E9PQ53 114 aa3.24□□□□□ -1.89
HDAC3-206ENST00000471968 SMKR1H3BMG3 65 aa3.24□□□□□ -1.89
HDAC3-206ENST00000471968 SNCGO76070 127 aa3.24□□□□□ -1.89
HDAC3-206ENST00000471968 IFITM1P13164 125 aa3.24□□□□□ -1.89
HDAC3-206ENST00000471968 PLNP26678 52 aa3.24□□□□□ -1.89
HDAC3-206ENST00000471968 NDUFV3P56181 108 aaKnown RBP3.24□□□□□ -1.89
HDAC3-206ENST00000471968 FAM104BQ5XKR9 115 aa3.24□□□□□ -1.89
HDAC3-206ENST00000471968 KRTAP5-7Q6L8G8 165 aa3.24□□□□□ -1.89
HDAC3-206ENST00000471968 SMIM20Q8N5G0 67 aa3.24□□□□□ -1.89
HDAC3-206ENST00000471968 HIST1H4GQ99525 98 aa3.24□□□□□ -1.89
HDAC3-206ENST00000471968 NXT2Q9NPJ8 142 aaKnown RBP3.24□□□□□ -1.89
HDAC3-206ENST00000471968 MYMXA0A1B0GTQ4 84 aa3.23□□□□□ -1.89
HDAC3-206ENST00000471968 D6R8Y8 96 aa3.23□□□□□ -1.89
HDAC3-206ENST00000471968 MRPL51Q4U2R6 128 aaKnown RBP3.23□□□□□ -1.89
HDAC3-206ENST00000471968 ZC2HC1BQ5TFG8 222 aa3.23□□□□□ -1.89
HDAC3-206ENST00000471968 LINC00167Q96N53 147 aa3.23□□□□□ -1.89
HDAC3-206ENST00000471968 TRAV13-1A0A0B4J241 112 aa3.22□□□□□ -1.89
HDAC3-206ENST00000471968 TRBV27A0A0K0K1C4 114 aa3.22□□□□□ -1.89
HDAC3-206ENST00000471968 LOC389332A0A1B0GUA5 103 aa3.22□□□□□ -1.89
HDAC3-206ENST00000471968 F8WDY8 70 aa3.22□□□□□ -1.89
HDAC3-206ENST00000471968 SMCPP49901 116 aaPredicted RBP3.22□□□□□ -1.89
HDAC3-206ENST00000471968 C5orf47Q569G3 176 aa3.22□□□□□ -1.89
HDAC3-206ENST00000471968 SPRR4Q96PI1 79 aa3.22□□□□□ -1.89
HDAC3-206ENST00000471968 SMIM2Q9BVW6 85 aa3.22□□□□□ -1.89
HDAC3-206ENST00000471968 KRTAP3-3Q9BYR6 98 aa3.22□□□□□ -1.89
HDAC3-206ENST00000471968 KRTAP3-2Q9BYR7 98 aa3.22□□□□□ -1.89
HDAC3-206ENST00000471968 XAGE1AQ9HD64 81 aa3.22□□□□□ -1.89
HDAC3-206ENST00000471968 TRAV12-1A0A0B4J245 112 aa3.21□□□□□ -1.9
HDAC3-206ENST00000471968 FAM240AA0A1B0GVK7 77 aa3.21□□□□□ -1.9
HDAC3-206ENST00000471968 NPYP01303 97 aa3.21□□□□□ -1.9
HDAC3-206ENST00000471968 SCGB1C2P0DMR2 95 aa3.21□□□□□ -1.9
HDAC3-206ENST00000471968 POLR2KP53803 58 aaKnown RBP3.21□□□□□ -1.9
HDAC3-206ENST00000471968 ORMDL2Q53FV1 153 aa3.21□□□□□ -1.9
HDAC3-206ENST00000471968 PAPPA-AS1Q5QFB9 102 aa3.21□□□□□ -1.9
HDAC3-206ENST00000471968 FAM19A1Q7Z5A9 133 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms