RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 VAMP8Q9BV40 100 aa9.15□□□□□ -0.94
SNX13-205ENST00000471744 IGLV6-57P01721 117 aa9.14□□□□□ -0.95
SNX13-205ENST00000471744 COX8AP10176 69 aa9.14□□□□□ -0.95
SNX13-205ENST00000471744 SPRR1AP35321 89 aa9.14□□□□□ -0.95
SNX13-205ENST00000471744 LINC00337Q8N6G1 96 aa9.14□□□□□ -0.95
SNX13-205ENST00000471744 DLEU1O43261 78 aa9.13□□□□□ -0.95
SNX13-205ENST00000471744 ETDCA0A1B0GVM5 59 aa9.12□□□□□ -0.95
SNX13-205ENST00000471744 SPATA45Q537H7 98 aa9.12□□□□□ -0.95
SNX13-205ENST00000471744 PAM16Q9Y3D7 125 aa9.12□□□□□ -0.95
SNX13-205ENST00000471744 PRLHP81277 87 aa9.11□□□□□ -0.95
SNX13-205ENST00000471744 MUSTN1Q8IVN3 82 aa9.11□□□□□ -0.95
SNX13-205ENST00000471744 LRP1Q07954 4544 aaKnown RBP9.11□□□□□ -0.95
SNX13-205ENST00000471744 TRAV23DV6A0A075B6W5 121 aa9.1□□□□□ -0.95
SNX13-205ENST00000471744 OR13C6PQ8NH95 151 aa9.1□□□□□ -0.95
SNX13-205ENST00000471744 KRTAP4-16G5E9R7 235 aaPredicted RBP9.09□□□□□ -0.95
SNX13-205ENST00000471744 MT1HL1P0DM35 61 aa9.09□□□□□ -0.95
SNX13-205ENST00000471744 PYY3Q5JQD4 70 aa9.09□□□□□ -0.95
SNX13-205ENST00000471744 FAT3Q8TDW7 4589 aa9.09□□□□□ -0.95
SNX13-205ENST00000471744 KRTAP1-4P0C5Y4 121 aa9.08□□□□□ -0.96
SNX13-205ENST00000471744 SLC25A34Q6PIV7 304 aa9.08□□□□□ -0.96
SNX13-205ENST00000471744 ZNF73O43830 326 aaPredicted RBP9.07□□□□□ -0.96
SNX13-205ENST00000471744 HINT1P49773 126 aaPredicted RBP9.07□□□□□ -0.96
SNX13-205ENST00000471744 C14orf144Q96I85 54 aa9.07□□□□□ -0.96
SNX13-205ENST00000471744 HIGD2AQ9BW72 106 aa9.07□□□□□ -0.96
SNX13-205ENST00000471744 RPL13AP40429 203 aaKnown RBP9.06□□□□□ -0.96
SNX13-205ENST00000471744 KRTAP10-8P60410 259 aa9.06□□□□□ -0.96
SNX13-205ENST00000471744 HIGD1BQ9P298 99 aa9.06□□□□□ -0.96
SNX13-205ENST00000471744 TRAV13-2A0A0B4J235 113 aa9.05□□□□□ -0.96
SNX13-205ENST00000471744 B5MCH6 92 aa9.05□□□□□ -0.96
SNX13-205ENST00000471744 Q6ZRX8 168 aa9.05□□□□□ -0.96
SNX13-205ENST00000471744 HIST1H4GQ99525 98 aa9.05□□□□□ -0.96
SNX13-205ENST00000471744 ZNF706Q9Y5V0 76 aaPredicted RBP9.05□□□□□ -0.96
SNX13-205ENST00000471744 FAM229BQ4G0N7 80 aa9.03□□□□□ -0.96
SNX13-205ENST00000471744 PRR26Q8N8Z3 221 aa9.03□□□□□ -0.96
SNX13-205ENST00000471744 A6NDN8 102 aa9.02□□□□□ -0.97
SNX13-205ENST00000471744 CRYGAP11844 174 aa9.02□□□□□ -0.97
SNX13-205ENST00000471744 A4D1N5 150 aa9.01□□□□□ -0.97
SNX13-205ENST00000471744 SMCR5Q8TEV8 140 aa9.01□□□□□ -0.97
SNX13-205ENST00000471744 TRBV7-6A0A0J9YX20 115 aa8.99□□□□□ -0.97
SNX13-205ENST00000471744 TAL2Q16559 108 aa8.99□□□□□ -0.97
SNX13-205ENST00000471744 C6orf99Q4VX62 202 aa8.99□□□□□ -0.97
SNX13-205ENST00000471744 SPRR4Q96PI1 79 aa8.99□□□□□ -0.97
SNX13-205ENST00000471744 C2orf91Q6ZV80 131 aa8.98□□□□□ -0.97
SNX13-205ENST00000471744 Q9BRP9 147 aa8.98□□□□□ -0.97
SNX13-205ENST00000471744 TMEM238LA0A1B0GVL6 79 aa8.97□□□□□ -0.97
SNX13-205ENST00000471744 COX7BP24311 80 aa8.97□□□□□ -0.97
SNX13-205ENST00000471744 ELOF1P60002 83 aaKnown RBP8.97□□□□□ -0.97
SNX13-205ENST00000471744 DHRS4-AS1Q9P1J3 65 aa8.97□□□□□ -0.97
SNX13-205ENST00000471744 A0A087X002 238 aa8.96□□□□□ -0.98
SNX13-205ENST00000471744 A0A1B0GWB2 263 aa8.96□□□□□ -0.98
SNX13-205ENST00000471744 TNXBP22105 4242 aa8.96□□□□□ -0.98
SNX13-205ENST00000471744 TYMSOSQ8TAI1 123 aa8.95□□□□□ -0.98
SNX13-205ENST00000471744 UQCR10Q9UDW1 63 aa8.95□□□□□ -0.98
SNX13-205ENST00000471744 ERC2-IT1O76042 136 aa8.94□□□□□ -0.98
SNX13-205ENST00000471744 SMIM11BQ8TCY0 68 aa8.94□□□□□ -0.98
SNX13-205ENST00000471744 ANAPC11Q9NYG5 84 aa8.94□□□□□ -0.98
SNX13-205ENST00000471744 LINC00483Q53H64 154 aa8.93□□□□□ -0.98
SNX13-205ENST00000471744 CEND1Q8N111 149 aa8.93□□□□□ -0.98
SNX13-205ENST00000471744 SMIM6P0DI80 62 aa8.92□□□□□ -0.98
SNX13-205ENST00000471744 VAMP3Q15836 100 aa8.92□□□□□ -0.98
SNX13-205ENST00000471744 C12orf57Q99622 126 aa8.92□□□□□ -0.98
SNX13-205ENST00000471744 A0A0B4J2C4 111 aa8.91□□□□□ -0.98
SNX13-205ENST00000471744 HSD52Q0P140 79 aa8.91□□□□□ -0.98
SNX13-205ENST00000471744 KRTAP13-2Q52LG2 175 aa8.91□□□□□ -0.98
SNX13-205ENST00000471744 GAGE2AQ6NT46 116 aa8.91□□□□□ -0.98
SNX13-205ENST00000471744 RAB37Q96AX2 223 aa8.91□□□□□ -0.98
SNX13-205ENST00000471744 NHP2Q9NX24 153 aaKnown RBP8.91□□□□□ -0.98
SNX13-205ENST00000471744 CFC1BP0CG36 223 aa8.9□□□□□ -0.98
SNX13-205ENST00000471744 CFC1P0CG37 223 aa8.9□□□□□ -0.98
SNX13-205ENST00000471744 SLC25A20O43772 301 aa8.88□□□□□ -0.99
SNX13-205ENST00000471744 BVES-AS1Q5T3Y7 98 aa8.87□□□□□ -0.99
SNX13-205ENST00000471744 FXYD2P54710 66 aa8.86□□□□□ -0.99
SNX13-205ENST00000471744 CTAG1AP78358 180 aa8.86□□□□□ -0.99
SNX13-205ENST00000471744 C3orf22Q8N5N4 141 aa8.86□□□□□ -0.99
SNX13-205ENST00000471744 SPRR1BP22528 89 aa8.85□□□□□ -0.99
SNX13-205ENST00000471744 LINC00304Q8N9R0 145 aa8.85□□□□□ -0.99
SNX13-205ENST00000471744 ST20-AS1Q8NBB2 130 aa8.85□□□□□ -0.99
SNX13-205ENST00000471744 PRO1854Q9UHT4 67 aa8.85□□□□□ -0.99
SNX13-205ENST00000471744 LOC105371267A0A1B0GV96 52 aa8.83□□□□□ -1
SNX13-205ENST00000471744 H7C2G1 150 aa8.83□□□□□ -1
SNX13-205ENST00000471744 LINC00575Q6W349 94 aa8.83□□□□□ -1
SNX13-205ENST00000471744 SSBP3-AS1Q7Z2R9 100 aa8.83□□□□□ -1
SNX13-205ENST00000471744 TEX49A0A1B0GTD5 131 aa8.82□□□□□ -1
SNX13-205ENST00000471744 Q1RN00 199 aa8.82□□□□□ -1
SNX13-205ENST00000471744 SPAG11AQ6PDA7 123 aa8.82□□□□□ -1
SNX13-205ENST00000471744 IGLV9-49A0A0B4J1Y8 123 aa8.81□□□□□ -1
SNX13-205ENST00000471744 PRO1933Q9H354 126 aa8.81□□□□□ -1
SNX13-205ENST00000471744 LAMTOR3Q9UHA4 124 aa8.81□□□□□ -1
SNX13-205ENST00000471744 IGLV5-48A0A075B6I7 105 aa8.8□□□□□ -1
SNX13-205ENST00000471744 hADV29S1A0JD25 119 aa8.8□□□□□ -1
SNX13-205ENST00000471744 H0YGX0 51 aa8.8□□□□□ -1
SNX13-205ENST00000471744 SNCGO76070 127 aa8.8□□□□□ -1
SNX13-205ENST00000471744 MOBPQ13875 183 aa8.8□□□□□ -1
SNX13-205ENST00000471744 C9orf153Q5TBE3 101 aa8.79□□□□□ -1
SNX13-205ENST00000471744 Q8NBF4 154 aa8.79□□□□□ -1
SNX13-205ENST00000471744 TSPAN13O95857 204 aa8.78□□□□□ -1
SNX13-205ENST00000471744 DEFB105AQ8NG35 78 aa8.78□□□□□ -1
SNX13-205ENST00000471744 TSTD3H0UI37 97 aa8.77□□□□□ -1.01
SNX13-205ENST00000471744 LINC01547P58512 204 aaPredicted RBP8.76□□□□□ -1.01
SNX13-205ENST00000471744 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms