RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 FAT3Q8TDW7 4589 aa8.51□□□□□ -1.05
HMGN1-211ENST00000471260 PKHD1L1Q86WI1 4243 aa8.51□□□□□ -1.05
HMGN1-211ENST00000471260 A0A096LNI7 61 aa8.5□□□□□ -1.05
HMGN1-211ENST00000471260 TRAV13-1A0A0B4J241 112 aa8.5□□□□□ -1.05
HMGN1-211ENST00000471260 TRAV13-2A0A0B4J235 113 aa8.49□□□□□ -1.05
HMGN1-211ENST00000471260 C2orf82Q6UX34 121 aa8.49□□□□□ -1.05
HMGN1-211ENST00000471260 COX7B2Q8TF08 81 aa8.49□□□□□ -1.05
HMGN1-211ENST00000471260 TRACP01848 142 aa8.48□□□□□ -1.05
HMGN1-211ENST00000471260 LINC00526Q96FQ7 95 aa8.48□□□□□ -1.05
HMGN1-211ENST00000471260 C2orf48Q96LS8 159 aa8.48□□□□□ -1.05
HMGN1-211ENST00000471260 A0A087WZ39 114 aa8.47□□□□□ -1.05
HMGN1-211ENST00000471260 LOC107984640A0A0U1RRK4 108 aa8.47□□□□□ -1.05
HMGN1-211ENST00000471260 Q6Q795 121 aa8.47□□□□□ -1.05
HMGN1-211ENST00000471260 F8WDY8 70 aa8.46□□□□□ -1.06
HMGN1-211ENST00000471260 CAMK2N2Q96S95 79 aa8.46□□□□□ -1.06
HMGN1-211ENST00000471260 IGHV3OR16-9A0A0B4J2B5 98 aa8.45□□□□□ -1.06
HMGN1-211ENST00000471260 PRR3P79522 188 aaKnown RBP8.45□□□□□ -1.06
HMGN1-211ENST00000471260 C5orf38Q86SI9 138 aa8.45□□□□□ -1.06
HMGN1-211ENST00000471260 ACYP1P07311 99 aa8.44□□□□□ -1.06
HMGN1-211ENST00000471260 RPL28P46779 137 aaKnown RBP8.44□□□□□ -1.06
HMGN1-211ENST00000471260 NPC2P61916 151 aa8.44□□□□□ -1.06
HMGN1-211ENST00000471260 SOSTDC1Q6X4U4 206 aa8.44□□□□□ -1.06
HMGN1-211ENST00000471260 MT1HL1P0DM35 61 aa8.43□□□□□ -1.06
HMGN1-211ENST00000471260 SPAG11BQ08648 103 aa8.43□□□□□ -1.06
HMGN1-211ENST00000471260 DAND5Q8N907 189 aa8.43□□□□□ -1.06
HMGN1-211ENST00000471260 SNCGO76070 127 aa8.42□□□□□ -1.06
HMGN1-211ENST00000471260 MT-ATP8P03928 68 aa8.42□□□□□ -1.06
HMGN1-211ENST00000471260 CXCL5P42830 114 aa8.42□□□□□ -1.06
HMGN1-211ENST00000471260 GAGE2BQ13066 116 aa8.42□□□□□ -1.06
HMGN1-211ENST00000471260 Q8IZM0 81 aa8.42□□□□□ -1.06
HMGN1-211ENST00000471260 CLEC2BQ92478 149 aa8.42□□□□□ -1.06
HMGN1-211ENST00000471260 Q6ZRP5 223 aa8.41□□□□□ -1.06
HMGN1-211ENST00000471260 TEX49A0A1B0GTD5 131 aa8.4□□□□□ -1.06
HMGN1-211ENST00000471260 CKS1BP61024 79 aa8.4□□□□□ -1.06
HMGN1-211ENST00000471260 SPINK6Q6UWN8 80 aa8.4□□□□□ -1.06
HMGN1-211ENST00000471260 MIR7-3HGQ8N6C7 128 aa8.4□□□□□ -1.06
HMGN1-211ENST00000471260 PLA2G2DQ9UNK4 145 aa8.4□□□□□ -1.06
HMGN1-211ENST00000471260 H0YGX0 51 aa8.39□□□□□ -1.07
HMGN1-211ENST00000471260 SND1-IT1Q9HBX3 110 aa8.39□□□□□ -1.07
HMGN1-211ENST00000471260 RPL18AQ02543 176 aaKnown RBP8.38□□□□□ -1.07
HMGN1-211ENST00000471260 A0A1W2PNN7 141 aa8.37□□□□□ -1.07
HMGN1-211ENST00000471260 TLX1NBP0CAT3 122 aa8.37□□□□□ -1.07
HMGN1-211ENST00000471260 COX17Q14061 63 aa8.37□□□□□ -1.07
HMGN1-211ENST00000471260 C9orf116Q5BN46 136 aaPredicted RBP8.37□□□□□ -1.07
HMGN1-211ENST00000471260 REG3GQ6UW15 175 aa8.37□□□□□ -1.07
HMGN1-211ENST00000471260 TOMM7Q9P0U1 55 aa8.37□□□□□ -1.07
HMGN1-211ENST00000471260 A0A1B0GX51 115 aa8.36□□□□□ -1.07
HMGN1-211ENST00000471260 LINC00158P58513 81 aa8.36□□□□□ -1.07
HMGN1-211ENST00000471260 GAGE2EQ4V326 116 aa8.36□□□□□ -1.07
HMGN1-211ENST00000471260 GAGE2DQ9UEU5 116 aa8.36□□□□□ -1.07
HMGN1-211ENST00000471260 NDUFC2O95298 119 aa8.35□□□□□ -1.07
HMGN1-211ENST00000471260 IMUPQ9GZP8 106 aa8.35□□□□□ -1.07
HMGN1-211ENST00000471260 IGKV2-28A0A075B6P5 120 aa8.34□□□□□ -1.07
HMGN1-211ENST00000471260 TRBV7-7A0A0K0K1E9 115 aa8.34□□□□□ -1.07
HMGN1-211ENST00000471260 A0A0U1RRA0 63 aa8.34□□□□□ -1.07
HMGN1-211ENST00000471260 DNAL4O96015 105 aa8.34□□□□□ -1.07
HMGN1-211ENST00000471260 IGKV2D-28P01615 120 aa8.34□□□□□ -1.07
HMGN1-211ENST00000471260 KIAA0087Q14695 138 aa8.34□□□□□ -1.07
HMGN1-211ENST00000471260 UNQ6190/PRO20217Q6UXQ8 127 aa8.34□□□□□ -1.07
HMGN1-211ENST00000471260 LINC00337Q8N6G1 96 aa8.34□□□□□ -1.07
HMGN1-211ENST00000471260 HMCN2Q8NDA2 5059 aa8.34□□□□□ -1.07
HMGN1-211ENST00000471260 TNXBP22105 4242 aa8.34□□□□□ -1.08
HMGN1-211ENST00000471260 C6orf226Q5I0X4 101 aa8.33□□□□□ -1.08
HMGN1-211ENST00000471260 C10orf25Q5T742 122 aa8.33□□□□□ -1.08
HMGN1-211ENST00000471260 C6orf48Q9UBA6 75 aa8.33□□□□□ -1.08
HMGN1-211ENST00000471260 PSORS1C2Q9UIG4 136 aa8.32□□□□□ -1.08
HMGN1-211ENST00000471260 BAALC-AS2P0C853 105 aa8.31□□□□□ -1.08
HMGN1-211ENST00000471260 SMIM11BQ8TCY0 68 aa8.31□□□□□ -1.08
HMGN1-211ENST00000471260 ANAPC13Q9BS18 74 aa8.31□□□□□ -1.08
HMGN1-211ENST00000471260 KRTAP10-8P60410 259 aa8.3□□□□□ -1.08
HMGN1-211ENST00000471260 PHF5AQ7RTV0 110 aaKnown RBP8.3□□□□□ -1.08
HMGN1-211ENST00000471260 LINC00643Q86TS7 51 aa8.3□□□□□ -1.08
HMGN1-211ENST00000471260 NDUFC2-KCTD14E9PQ53 114 aa8.29□□□□□ -1.08
HMGN1-211ENST00000471260 NDUFV3P56181 108 aaKnown RBP8.29□□□□□ -1.08
HMGN1-211ENST00000471260 FAM218AQ96MZ4 157 aa8.29□□□□□ -1.08
HMGN1-211ENST00000471260 C1orf137Q5JT78 98 aa8.28□□□□□ -1.08
HMGN1-211ENST00000471260 OBSCN-AS1Q96MR7 158 aa8.28□□□□□ -1.08
HMGN1-211ENST00000471260 LINC00167Q96N53 147 aa8.28□□□□□ -1.08
HMGN1-211ENST00000471260 PFN2P35080 140 aa8.27□□□□□ -1.09
HMGN1-211ENST00000471260 FAM168BA1KXE4 195 aa8.26□□□□□ -1.09
HMGN1-211ENST00000471260 IGLV7-43P04211 117 aa8.26□□□□□ -1.09
HMGN1-211ENST00000471260 TMEM126AQ9H061 195 aa8.26□□□□□ -1.09
HMGN1-211ENST00000471260 H3BQ85 93 aa8.25□□□□□ -1.09
HMGN1-211ENST00000471260 FAM19A5Q7Z5A7 132 aaPredicted RBP8.25□□□□□ -1.09
HMGN1-211ENST00000471260 DIRC1Q969H9 104 aa8.25□□□□□ -1.09
HMGN1-211ENST00000471260 C22orf24Q9Y442 160 aa8.25□□□□□ -1.09
HMGN1-211ENST00000471260 ORMDL1Q9P0S3 153 aa8.24□□□□□ -1.09
HMGN1-211ENST00000471260 C9orf129Q5T035 196 aaKnown RBP8.23□□□□□ -1.09
HMGN1-211ENST00000471260 KRTAP7-1Q8IUC3 87 aa8.23□□□□□ -1.09
HMGN1-211ENST00000471260 OR13C6PQ8NH95 151 aa8.23□□□□□ -1.09
HMGN1-211ENST00000471260 JMJD7-PLA2G4BH0Y9G9 81 aa8.22□□□□□ -1.09
HMGN1-211ENST00000471260 UBE2BP63146 152 aa8.22□□□□□ -1.09
HMGN1-211ENST00000471260 KRTAP11-1Q8IUC1 163 aa8.21□□□□□ -1.1
HMGN1-211ENST00000471260 H0Y9J4 135 aa8.2□□□□□ -1.1
HMGN1-211ENST00000471260 S100A7L2Q5SY68 101 aa8.2□□□□□ -1.1
HMGN1-211ENST00000471260 TMEM256-PLSCR3K7ERE1 68 aa8.19□□□□□ -1.1
HMGN1-211ENST00000471260 ATP5EP2Q5VTU8 51 aa8.18□□□□□ -1.1
HMGN1-211ENST00000471260 Q6JHZ5 121 aa8.18□□□□□ -1.1
HMGN1-211ENST00000471260 GAGE2AQ6NT46 116 aa8.18□□□□□ -1.1
HMGN1-211ENST00000471260 GHRHP01286 108 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 170.4 ms