RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 COPS9Q8WXC6 57 aa11.79□□□□□ -0.52
HDAC7-220ENST00000471235 HIGD2AQ9BW72 106 aa11.78□□□□□ -0.52
HDAC7-220ENST00000471235 COX8AP10176 69 aa11.77□□□□□ -0.53
HDAC7-220ENST00000471235 MUSTN1Q8IVN3 82 aa11.77□□□□□ -0.53
HDAC7-220ENST00000471235 B5MCH6 92 aa11.76□□□□□ -0.53
HDAC7-220ENST00000471235 PAM16Q9Y3D7 125 aa11.76□□□□□ -0.53
HDAC7-220ENST00000471235 SPATA45Q537H7 98 aa11.75□□□□□ -0.53
HDAC7-220ENST00000471235 LINC00518Q8N0U6 118 aa11.75□□□□□ -0.53
HDAC7-220ENST00000471235 OR13C6PQ8NH95 151 aa11.75□□□□□ -0.53
HDAC7-220ENST00000471235 VAMP8Q9BV40 100 aa11.75□□□□□ -0.53
HDAC7-220ENST00000471235 A0A087X002 238 aa11.73□□□□□ -0.53
HDAC7-220ENST00000471235 ZNF73O43830 326 aaPredicted RBP11.73□□□□□ -0.53
HDAC7-220ENST00000471235 RPL13AP40429 203 aaKnown RBP11.73□□□□□ -0.53
HDAC7-220ENST00000471235 SMCR5Q8TEV8 140 aa11.73□□□□□ -0.53
HDAC7-220ENST00000471235 ANAPC11Q9NYG5 84 aa11.73□□□□□ -0.53
HDAC7-220ENST00000471235 Q6ZRX8 168 aa11.72□□□□□ -0.53
HDAC7-220ENST00000471235 CBY1Q9Y3M2 126 aa11.72□□□□□ -0.53
HDAC7-220ENST00000471235 DLEU1O43261 78 aa11.71□□□□□ -0.53
HDAC7-220ENST00000471235 PYY3Q5JQD4 70 aa11.71□□□□□ -0.53
HDAC7-220ENST00000471235 C14orf144Q96I85 54 aa11.7□□□□□ -0.54
HDAC7-220ENST00000471235 Q9BRP9 147 aa11.7□□□□□ -0.54
HDAC7-220ENST00000471235 CRYGAP11844 174 aa11.69□□□□□ -0.54
HDAC7-220ENST00000471235 FAM229BQ4G0N7 80 aa11.69□□□□□ -0.54
HDAC7-220ENST00000471235 SPRR4Q96PI1 79 aa11.69□□□□□ -0.54
HDAC7-220ENST00000471235 KRTAP13-2Q52LG2 175 aa11.67□□□□□ -0.54
HDAC7-220ENST00000471235 ZNF706Q9Y5V0 76 aaPredicted RBP11.67□□□□□ -0.54
HDAC7-220ENST00000471235 ERC2-IT1O76042 136 aa11.66□□□□□ -0.54
HDAC7-220ENST00000471235 SLC25A34Q6PIV7 304 aa11.65□□□□□ -0.54
HDAC7-220ENST00000471235 A4D1N5 150 aa11.64□□□□□ -0.55
HDAC7-220ENST00000471235 A6NDN8 102 aa11.64□□□□□ -0.55
HDAC7-220ENST00000471235 C6orf99Q4VX62 202 aa11.64□□□□□ -0.55
HDAC7-220ENST00000471235 HIST1H4GQ99525 98 aa11.64□□□□□ -0.55
HDAC7-220ENST00000471235 TRAV13-2A0A0B4J235 113 aa11.63□□□□□ -0.55
HDAC7-220ENST00000471235 HINT1P49773 126 aaPredicted RBP11.63□□□□□ -0.55
HDAC7-220ENST00000471235 C2orf91Q6ZV80 131 aa11.63□□□□□ -0.55
HDAC7-220ENST00000471235 TYMSOSQ8TAI1 123 aa11.63□□□□□ -0.55
HDAC7-220ENST00000471235 HIGD1BQ9P298 99 aa11.63□□□□□ -0.55
HDAC7-220ENST00000471235 HMCN2Q8NDA2 5059 aa11.61□□□□□ -0.55
HDAC7-220ENST00000471235 ELOF1P60002 83 aaKnown RBP11.61□□□□□ -0.55
HDAC7-220ENST00000471235 COX7BP24311 80 aa11.6□□□□□ -0.55
HDAC7-220ENST00000471235 LINC00483Q53H64 154 aa11.59□□□□□ -0.55
HDAC7-220ENST00000471235 C3orf22Q8N5N4 141 aa11.59□□□□□ -0.55
HDAC7-220ENST00000471235 C12orf57Q99622 126 aa11.58□□□□□ -0.56
HDAC7-220ENST00000471235 GAGE2AQ6NT46 116 aa11.57□□□□□ -0.56
HDAC7-220ENST00000471235 SMIM11BQ8TCY0 68 aa11.57□□□□□ -0.56
HDAC7-220ENST00000471235 TRBV7-6A0A0J9YX20 115 aa11.56□□□□□ -0.56
HDAC7-220ENST00000471235 DHRS4-AS1Q9P1J3 65 aa11.56□□□□□ -0.56
HDAC7-220ENST00000471235 ST20-AS1Q8NBB2 130 aa11.55□□□□□ -0.56
HDAC7-220ENST00000471235 A0A1B0GWB2 263 aa11.54□□□□□ -0.56
HDAC7-220ENST00000471235 TAL2Q16559 108 aa11.52□□□□□ -0.57
HDAC7-220ENST00000471235 LINC00304Q8N9R0 145 aa11.51□□□□□ -0.57
HDAC7-220ENST00000471235 CEND1Q8N111 149 aa11.5□□□□□ -0.57
HDAC7-220ENST00000471235 CFC1BP0CG36 223 aa11.49□□□□□ -0.57
HDAC7-220ENST00000471235 CFC1P0CG37 223 aa11.49□□□□□ -0.57
HDAC7-220ENST00000471235 TSPAN13O95857 204 aa11.48□□□□□ -0.57
HDAC7-220ENST00000471235 IGLV9-49A0A0B4J1Y8 123 aa11.47□□□□□ -0.57
HDAC7-220ENST00000471235 A0A0B4J2C4 111 aa11.47□□□□□ -0.57
HDAC7-220ENST00000471235 SPRR1BP22528 89 aa11.46□□□□□ -0.57
HDAC7-220ENST00000471235 MOBPQ13875 183 aa11.46□□□□□ -0.57
HDAC7-220ENST00000471235 RAB37Q96AX2 223 aa11.46□□□□□ -0.57
HDAC7-220ENST00000471235 UQCR10Q9UDW1 63 aa11.46□□□□□ -0.57
HDAC7-220ENST00000471235 FXYD2P54710 66 aa11.45□□□□□ -0.58
HDAC7-220ENST00000471235 HSD52Q0P140 79 aa11.45□□□□□ -0.58
HDAC7-220ENST00000471235 Q8NBF4 154 aa11.45□□□□□ -0.58
HDAC7-220ENST00000471235 TMEM238LA0A1B0GVL6 79 aa11.43□□□□□ -0.58
HDAC7-220ENST00000471235 A6NJY4 79 aa11.43□□□□□ -0.58
HDAC7-220ENST00000471235 H7C2G1 150 aa11.43□□□□□ -0.58
HDAC7-220ENST00000471235 VAMP3Q15836 100 aa11.43□□□□□ -0.58
HDAC7-220ENST00000471235 NHP2Q9NX24 153 aaKnown RBP11.42□□□□□ -0.58
HDAC7-220ENST00000471235 SMIM6P0DI80 62 aa11.41□□□□□ -0.58
HDAC7-220ENST00000471235 C9orf153Q5TBE3 101 aa11.41□□□□□ -0.58
HDAC7-220ENST00000471235 LINC01547P58512 204 aaPredicted RBP11.4□□□□□ -0.58
HDAC7-220ENST00000471235 LINC00575Q6W349 94 aa11.4□□□□□ -0.58
HDAC7-220ENST00000471235 DEFB105AQ8NG35 78 aa11.4□□□□□ -0.58
HDAC7-220ENST00000471235 IGLV5-48A0A075B6I7 105 aa11.39□□□□□ -0.59
HDAC7-220ENST00000471235 TEX49A0A1B0GTD5 131 aa11.38□□□□□ -0.59
HDAC7-220ENST00000471235 SLC25A20O43772 301 aa11.38□□□□□ -0.59
HDAC7-220ENST00000471235 BVES-AS1Q5T3Y7 98 aa11.38□□□□□ -0.59
HDAC7-220ENST00000471235 SPAG11AQ6PDA7 123 aa11.38□□□□□ -0.59
HDAC7-220ENST00000471235 SSBP3-AS1Q7Z2R9 100 aa11.38□□□□□ -0.59
HDAC7-220ENST00000471235 PRO1933Q9H354 126 aa11.38□□□□□ -0.59
HDAC7-220ENST00000471235 CTAG1AP78358 180 aa11.37□□□□□ -0.59
HDAC7-220ENST00000471235 PRO1854Q9UHT4 67 aa11.37□□□□□ -0.59
HDAC7-220ENST00000471235 LAMTOR3Q9UHA4 124 aa11.36□□□□□ -0.59
HDAC7-220ENST00000471235 LOC105371267A0A1B0GV96 52 aa11.35□□□□□ -0.59
HDAC7-220ENST00000471235 hADV29S1A0JD25 119 aa11.35□□□□□ -0.59
HDAC7-220ENST00000471235 PRR4Q16378 134 aa11.35□□□□□ -0.59
HDAC7-220ENST00000471235 Q1RN00 199 aa11.35□□□□□ -0.59
HDAC7-220ENST00000471235 C4orf48Q5BLP8 95 aa11.35□□□□□ -0.59
HDAC7-220ENST00000471235 K7ERJ3 54 aa11.33□□□□□ -0.6
HDAC7-220ENST00000471235 Q6ZQY7 126 aa11.33□□□□□ -0.6
HDAC7-220ENST00000471235 SMIM29Q86T20 159 aa11.33□□□□□ -0.6
HDAC7-220ENST00000471235 Q8N377 158 aa11.33□□□□□ -0.6
HDAC7-220ENST00000471235 RETNLBQ9BQ08 111 aa11.33□□□□□ -0.6
HDAC7-220ENST00000471235 LRP2P98164 4655 aa11.33□□□□□ -0.6
HDAC7-220ENST00000471235 SPINK1P00995 79 aa11.31□□□□□ -0.6
HDAC7-220ENST00000471235 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.28□□□□□ -0.6
HDAC7-220ENST00000471235 FAM218AQ96MZ4 157 aa11.28□□□□□ -0.6
HDAC7-220ENST00000471235 H0YGX0 51 aa11.27□□□□□ -0.61
HDAC7-220ENST00000471235 TRIAP1O43715 76 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 149.2 ms