RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 UNQ6190/PRO20217Q6UXQ8 127 aa7.5□□□□□ -1.21
HDAC6-217ENST00000469223 A0A1B0GWB2 263 aa7.49□□□□□ -1.21
HDAC6-217ENST00000469223 DAND5Q8N907 189 aa7.49□□□□□ -1.21
HDAC6-217ENST00000469223 SND1-IT1Q9HBX3 110 aa7.49□□□□□ -1.21
HDAC6-217ENST00000469223 PRO1854Q9UHT4 67 aa7.49□□□□□ -1.21
HDAC6-217ENST00000469223 TRAV13-2A0A0B4J235 113 aa7.48□□□□□ -1.21
HDAC6-217ENST00000469223 A0A1W2PNN7 141 aa7.48□□□□□ -1.21
HDAC6-217ENST00000469223 NPC2P61916 151 aa7.48□□□□□ -1.21
HDAC6-217ENST00000469223 NDUFC2-KCTD14E9PQ53 114 aa7.47□□□□□ -1.21
HDAC6-217ENST00000469223 Q1RN00 199 aa7.47□□□□□ -1.21
HDAC6-217ENST00000469223 LINC00526Q96FQ7 95 aa7.47□□□□□ -1.21
HDAC6-217ENST00000469223 C6orf48Q9UBA6 75 aa7.47□□□□□ -1.21
HDAC6-217ENST00000469223 LOC107984156A0A0G2JMH3 177 aa7.46□□□□□ -1.22
HDAC6-217ENST00000469223 NDUFC2O95298 119 aa7.46□□□□□ -1.22
HDAC6-217ENST00000469223 GAGE2BQ13066 116 aa7.46□□□□□ -1.22
HDAC6-217ENST00000469223 PHF5AQ7RTV0 110 aaKnown RBP7.46□□□□□ -1.22
HDAC6-217ENST00000469223 ARL17AQ8IVW1 177 aa7.46□□□□□ -1.22
HDAC6-217ENST00000469223 RETNLBQ9BQ08 111 aa7.46□□□□□ -1.22
HDAC6-217ENST00000469223 CBY1Q9Y3M2 126 aa7.46□□□□□ -1.22
HDAC6-217ENST00000469223 LOC107984640A0A0U1RRK4 108 aa7.45□□□□□ -1.22
HDAC6-217ENST00000469223 C9orf118A6NHY6 69 aa7.45□□□□□ -1.22
HDAC6-217ENST00000469223 COX6CP09669 75 aa7.45□□□□□ -1.22
HDAC6-217ENST00000469223 CFC1BP0CG36 223 aa7.45□□□□□ -1.22
HDAC6-217ENST00000469223 CFC1P0CG37 223 aa7.45□□□□□ -1.22
HDAC6-217ENST00000469223 C10orf25Q5T742 122 aa7.45□□□□□ -1.22
HDAC6-217ENST00000469223 TAX1BP3O14907 124 aa7.44□□□□□ -1.22
HDAC6-217ENST00000469223 TLX1NBP0CAT3 122 aa7.44□□□□□ -1.22
HDAC6-217ENST00000469223 FABP2P12104 132 aa7.44□□□□□ -1.22
HDAC6-217ENST00000469223 TPRXLQ17RH7 258 aa7.44□□□□□ -1.22
HDAC6-217ENST00000469223 K7ERJ3 54 aa7.43□□□□□ -1.22
HDAC6-217ENST00000469223 CRYGAP11844 174 aa7.43□□□□□ -1.22
HDAC6-217ENST00000469223 PSMB2P49721 201 aa7.43□□□□□ -1.22
HDAC6-217ENST00000469223 C9orf116Q5BN46 136 aaPredicted RBP7.43□□□□□ -1.22
HDAC6-217ENST00000469223 H3BUT2 72 aa7.42□□□□□ -1.22
HDAC6-217ENST00000469223 RPL18AQ02543 176 aaKnown RBP7.42□□□□□ -1.22
HDAC6-217ENST00000469223 GTF2H5Q6ZYL4 71 aa7.42□□□□□ -1.22
HDAC6-217ENST00000469223 TRBV10-2A0A0K0K1G8 114 aa7.41□□□□□ -1.22
HDAC6-217ENST00000469223 VAMP3Q15836 100 aa7.41□□□□□ -1.22
HDAC6-217ENST00000469223 S100A7L2Q5SY68 101 aa7.41□□□□□ -1.22
HDAC6-217ENST00000469223 SOSTDC1Q6X4U4 206 aa7.41□□□□□ -1.22
HDAC6-217ENST00000469223 A0A1W2PPM0 123 aa7.4□□□□□ -1.22
HDAC6-217ENST00000469223 SCGB1C2P0DMR2 95 aa7.4□□□□□ -1.22
HDAC6-217ENST00000469223 GAGE2EQ4V326 116 aa7.4□□□□□ -1.22
HDAC6-217ENST00000469223 KRTAP11-1Q8IUC1 163 aa7.4□□□□□ -1.22
HDAC6-217ENST00000469223 OR13C6PQ8NH95 151 aa7.4□□□□□ -1.22
HDAC6-217ENST00000469223 TMEM126AQ9H061 195 aa7.4□□□□□ -1.22
HDAC6-217ENST00000469223 GAGE2DQ9UEU5 116 aa7.4□□□□□ -1.22
HDAC6-217ENST00000469223 TRBV20-1A0A075B6N2 111 aa7.39□□□□□ -1.23
HDAC6-217ENST00000469223 H7C2G1 150 aa7.39□□□□□ -1.23
HDAC6-217ENST00000469223 A0A1B0GV90 55 aa7.38□□□□□ -1.23
HDAC6-217ENST00000469223 SNCGO76070 127 aa7.38□□□□□ -1.23
HDAC6-217ENST00000469223 NKAPP1Q8N9T2 125 aa7.38□□□□□ -1.23
HDAC6-217ENST00000469223 KRTAP4-1Q9BYQ7 146 aa7.38□□□□□ -1.23
HDAC6-217ENST00000469223 SSPOA2VEC9 5147 aa7.38□□□□□ -1.23
HDAC6-217ENST00000469223 GAGE10A6NGK3 116 aa7.37□□□□□ -1.23
HDAC6-217ENST00000469223 XAGE1AQ9HD64 81 aa7.37□□□□□ -1.23
HDAC6-217ENST00000469223 SPCS1Q9Y6A9 102 aa7.37□□□□□ -1.23
HDAC6-217ENST00000469223 M0R378 163 aa7.36□□□□□ -1.23
HDAC6-217ENST00000469223 IGLV7-46A0A075B6I9 117 aa7.35□□□□□ -1.23
HDAC6-217ENST00000469223 EIF4EBP3O60516 100 aaPredicted RBP7.35□□□□□ -1.23
HDAC6-217ENST00000469223 IGKV2-28A0A075B6P5 120 aa7.34□□□□□ -1.23
HDAC6-217ENST00000469223 NCR3O14931 201 aa7.34□□□□□ -1.23
HDAC6-217ENST00000469223 IGKV2D-28P01615 120 aa7.34□□□□□ -1.23
HDAC6-217ENST00000469223 RPL28P46779 137 aaKnown RBP7.34□□□□□ -1.23
HDAC6-217ENST00000469223 LINC00337Q8N6G1 96 aa7.34□□□□□ -1.23
HDAC6-217ENST00000469223 USH2AO75445 5202 aa7.33□□□□□ -1.24
HDAC6-217ENST00000469223 A0A087X002 238 aa7.33□□□□□ -1.24
HDAC6-217ENST00000469223 H0YGX0 51 aa7.33□□□□□ -1.24
HDAC6-217ENST00000469223 K7EP34 96 aa7.33□□□□□ -1.24
HDAC6-217ENST00000469223 ATXN8Q156A1 80 aa7.33□□□□□ -1.24
HDAC6-217ENST00000469223 NAA38Q9BRA0 125 aaKnown RBP7.33□□□□□ -1.24
HDAC6-217ENST00000469223 VPREB1P12018 145 aa7.32□□□□□ -1.24
HDAC6-217ENST00000469223 UBE2V1Q13404 147 aa7.32□□□□□ -1.24
HDAC6-217ENST00000469223 LCE2CQ5TA81 110 aa7.32□□□□□ -1.24
HDAC6-217ENST00000469223 IGLV5-37A0A075B6J1 123 aa7.31□□□□□ -1.24
HDAC6-217ENST00000469223 TRIAP1O43715 76 aa7.31□□□□□ -1.24
HDAC6-217ENST00000469223 C9orf129Q5T035 196 aaKnown RBP7.31□□□□□ -1.24
HDAC6-217ENST00000469223 TYMSOSQ8TAI1 123 aa7.31□□□□□ -1.24
HDAC6-217ENST00000469223 FAM168BA1KXE4 195 aa7.3□□□□□ -1.24
HDAC6-217ENST00000469223 IGLV6-57P01721 117 aa7.3□□□□□ -1.24
HDAC6-217ENST00000469223 ASB16-AS1Q495Z4 193 aa7.3□□□□□ -1.24
HDAC6-217ENST00000469223 SMIM11BQ8TCY0 68 aa7.3□□□□□ -1.24
HDAC6-217ENST00000469223 TRAV23DV6A0A075B6W5 121 aa7.29□□□□□ -1.24
HDAC6-217ENST00000469223 FAM19A5Q7Z5A7 132 aaPredicted RBP7.29□□□□□ -1.24
HDAC6-217ENST00000469223 SLC25A20O43772 301 aa7.28□□□□□ -1.24
HDAC6-217ENST00000469223 DNAL4O96015 105 aa7.28□□□□□ -1.24
HDAC6-217ENST00000469223 GHRHP01286 108 aa7.28□□□□□ -1.24
HDAC6-217ENST00000469223 LORP23490 312 aaPredicted RBP7.28□□□□□ -1.24
HDAC6-217ENST00000469223 MT1HP80294 61 aa7.28□□□□□ -1.24
HDAC6-217ENST00000469223 MRPL55Q7Z7F7 128 aaKnown RBP7.28□□□□□ -1.24
HDAC6-217ENST00000469223 TRBV7-6A0A0J9YX20 115 aa7.27□□□□□ -1.25
HDAC6-217ENST00000469223 TRBV10-3A0A0K0K1G6 114 aa7.27□□□□□ -1.25
HDAC6-217ENST00000469223 A0A1B0GX51 115 aa7.27□□□□□ -1.25
HDAC6-217ENST00000469223 UBE2BP63146 152 aa7.27□□□□□ -1.25
HDAC6-217ENST00000469223 F8W1H4 67 aa7.26□□□□□ -1.25
HDAC6-217ENST00000469223 M0QXV9 152 aa7.26□□□□□ -1.25
HDAC6-217ENST00000469223 PRYO14603 147 aa7.26□□□□□ -1.25
HDAC6-217ENST00000469223 ZNF73O43830 326 aaPredicted RBP7.26□□□□□ -1.25
HDAC6-217ENST00000469223 C22orf24Q9Y442 160 aa7.26□□□□□ -1.25
HDAC6-217ENST00000469223 FCGBPQ9Y6R7 5405 aaPredicted RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms