RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 SPRR1AP35321 89 aa11.54□□□□□ -0.56
USP11-205ENST00000467378 S100A7L2Q5SY68 101 aa11.54□□□□□ -0.56
USP11-205ENST00000467378 RPL28P46779 137 aaKnown RBP11.53□□□□□ -0.56
USP11-205ENST00000467378 FAM19A1Q7Z5A9 133 aa11.53□□□□□ -0.56
USP11-205ENST00000467378 UBE2AP49459 152 aa11.52□□□□□ -0.57
USP11-205ENST00000467378 LINC00518Q8N0U6 118 aa11.52□□□□□ -0.57
USP11-205ENST00000467378 KRTAP4-16G5E9R7 235 aaPredicted RBP11.51□□□□□ -0.57
USP11-205ENST00000467378 SLC25A34Q6PIV7 304 aa11.51□□□□□ -0.57
USP11-205ENST00000467378 S100A12P80511 92 aa11.5□□□□□ -0.57
USP11-205ENST00000467378 PRLHP81277 87 aa11.5□□□□□ -0.57
USP11-205ENST00000467378 LINC00337Q8N6G1 96 aa11.5□□□□□ -0.57
USP11-205ENST00000467378 HIGD1BQ9P298 99 aa11.49□□□□□ -0.57
USP11-205ENST00000467378 C2orf91Q6ZV80 131 aa11.48□□□□□ -0.57
USP11-205ENST00000467378 OR13C6PQ8NH95 151 aa11.48□□□□□ -0.57
USP11-205ENST00000467378 TRAV23DV6A0A075B6W5 121 aa11.47□□□□□ -0.57
USP11-205ENST00000467378 HIST1H4GQ99525 98 aa11.47□□□□□ -0.57
USP11-205ENST00000467378 KRTAP9-6A0A140TA67 174 aa11.46□□□□□ -0.57
USP11-205ENST00000467378 ETDCA0A1B0GVM5 59 aa11.45□□□□□ -0.58
USP11-205ENST00000467378 KRTAP1-4P0C5Y4 121 aa11.45□□□□□ -0.58
USP11-205ENST00000467378 KRTAP10-8P60410 259 aa11.45□□□□□ -0.58
USP11-205ENST00000467378 A4D1N5 150 aa11.44□□□□□ -0.58
USP11-205ENST00000467378 B5MCH6 92 aa11.44□□□□□ -0.58
USP11-205ENST00000467378 CBY1Q9Y3M2 126 aa11.44□□□□□ -0.58
USP11-205ENST00000467378 ZNF73O43830 326 aaPredicted RBP11.43□□□□□ -0.58
USP11-205ENST00000467378 LPAP08519 4548 aa11.42□□□□□ -0.58
USP11-205ENST00000467378 LOC105371267A0A1B0GV96 52 aa11.42□□□□□ -0.58
USP11-205ENST00000467378 A6NDN8 102 aa11.41□□□□□ -0.58
USP11-205ENST00000467378 HIGD2AQ9BW72 106 aa11.41□□□□□ -0.58
USP11-205ENST00000467378 TRAV13-2A0A0B4J235 113 aa11.4□□□□□ -0.58
USP11-205ENST00000467378 SMCR5Q8TEV8 140 aa11.4□□□□□ -0.58
USP11-205ENST00000467378 TAL2Q16559 108 aa11.39□□□□□ -0.59
USP11-205ENST00000467378 Q6ZRX8 168 aa11.39□□□□□ -0.59
USP11-205ENST00000467378 SMIM6P0DI80 62 aa11.37□□□□□ -0.59
USP11-205ENST00000467378 Q9BRP9 147 aa11.37□□□□□ -0.59
USP11-205ENST00000467378 UQCR10Q9UDW1 63 aa11.37□□□□□ -0.59
USP11-205ENST00000467378 HINT1P49773 126 aaPredicted RBP11.36□□□□□ -0.59
USP11-205ENST00000467378 C6orf99Q4VX62 202 aa11.36□□□□□ -0.59
USP11-205ENST00000467378 PRR26Q8N8Z3 221 aa11.36□□□□□ -0.59
USP11-205ENST00000467378 CEND1Q8N111 149 aa11.35□□□□□ -0.59
USP11-205ENST00000467378 C12orf57Q99622 126 aa11.35□□□□□ -0.59
USP11-205ENST00000467378 A0A0U1RQV1 116 aa11.33□□□□□ -0.6
USP11-205ENST00000467378 ERC2-IT1O76042 136 aa11.33□□□□□ -0.6
USP11-205ENST00000467378 SMIM11BQ8TCY0 68 aa11.33□□□□□ -0.6
USP11-205ENST00000467378 ANAPC11Q9NYG5 84 aa11.33□□□□□ -0.6
USP11-205ENST00000467378 TRBV7-6A0A0J9YX20 115 aa11.32□□□□□ -0.6
USP11-205ENST00000467378 CFC1BP0CG36 223 aa11.32□□□□□ -0.6
USP11-205ENST00000467378 CFC1P0CG37 223 aa11.32□□□□□ -0.6
USP11-205ENST00000467378 ELOF1P60002 83 aaKnown RBP11.32□□□□□ -0.6
USP11-205ENST00000467378 SPRR4Q96PI1 79 aa11.32□□□□□ -0.6
USP11-205ENST00000467378 COX7BP24311 80 aa11.31□□□□□ -0.6
USP11-205ENST00000467378 PRO1933Q9H354 126 aa11.31□□□□□ -0.6
USP11-205ENST00000467378 A0A087X002 238 aa11.3□□□□□ -0.6
USP11-205ENST00000467378 HSD52Q0P140 79 aa11.3□□□□□ -0.6
USP11-205ENST00000467378 RPL13AP40429 203 aaKnown RBP11.29□□□□□ -0.6
USP11-205ENST00000467378 FXYD2P54710 66 aa11.29□□□□□ -0.6
USP11-205ENST00000467378 FAM229BQ4G0N7 80 aa11.29□□□□□ -0.6
USP11-205ENST00000467378 ZNF706Q9Y5V0 76 aaPredicted RBP11.29□□□□□ -0.6
USP11-205ENST00000467378 A0A0B4J2C4 111 aa11.28□□□□□ -0.6
USP11-205ENST00000467378 A0A1B0GWB2 263 aa11.28□□□□□ -0.6
USP11-205ENST00000467378 CRYGAP11844 174 aa11.28□□□□□ -0.6
USP11-205ENST00000467378 DHRS4-AS1Q9P1J3 65 aa11.27□□□□□ -0.61
USP11-205ENST00000467378 KRTAP13-2Q52LG2 175 aa11.26□□□□□ -0.61
USP11-205ENST00000467378 RAB37Q96AX2 223 aa11.26□□□□□ -0.61
USP11-205ENST00000467378 MUC2Q02817 5179 aa11.25□□□□□ -0.61
USP11-205ENST00000467378 TMEM238LA0A1B0GVL6 79 aa11.25□□□□□ -0.61
USP11-205ENST00000467378 A6NJY4 79 aa11.25□□□□□ -0.61
USP11-205ENST00000467378 LINC00483Q53H64 154 aa11.24□□□□□ -0.61
USP11-205ENST00000467378 ST20-AS1Q8NBB2 130 aa11.23□□□□□ -0.61
USP11-205ENST00000467378 FAT4Q6V0I7 4981 aa11.23□□□□□ -0.61
USP11-205ENST00000467378 GAGE2AQ6NT46 116 aa11.22□□□□□ -0.61
USP11-205ENST00000467378 VAMP3Q15836 100 aa11.21□□□□□ -0.61
USP11-205ENST00000467378 TYMSOSQ8TAI1 123 aa11.21□□□□□ -0.61
USP11-205ENST00000467378 PRO1854Q9UHT4 67 aa11.21□□□□□ -0.61
USP11-205ENST00000467378 H7C2G1 150 aa11.2□□□□□ -0.62
USP11-205ENST00000467378 C3orf22Q8N5N4 141 aa11.19□□□□□ -0.62
USP11-205ENST00000467378 NHP2Q9NX24 153 aaKnown RBP11.19□□□□□ -0.62
USP11-205ENST00000467378 BVES-AS1Q5T3Y7 98 aa11.18□□□□□ -0.62
USP11-205ENST00000467378 LINC00575Q6W349 94 aa11.17□□□□□ -0.62
USP11-205ENST00000467378 SPRR1BP22528 89 aa11.16□□□□□ -0.62
USP11-205ENST00000467378 CTAG1AP78358 180 aa11.16□□□□□ -0.62
USP11-205ENST00000467378 LCE2AQ5TA79 106 aaPredicted RBP11.16□□□□□ -0.62
USP11-205ENST00000467378 TSTD3H0UI37 97 aa11.14□□□□□ -0.63
USP11-205ENST00000467378 K7ERJ3 54 aa11.14□□□□□ -0.63
USP11-205ENST00000467378 SLC25A20O43772 301 aa11.13□□□□□ -0.63
USP11-205ENST00000467378 LINC01547P58512 204 aaPredicted RBP11.13□□□□□ -0.63
USP11-205ENST00000467378 Q1RN00 199 aa11.13□□□□□ -0.63
USP11-205ENST00000467378 hADV29S1A0JD25 119 aa11.12□□□□□ -0.63
USP11-205ENST00000467378 PRR4Q16378 134 aa11.11□□□□□ -0.63
USP11-205ENST00000467378 DEFB105AQ8NG35 78 aa11.11□□□□□ -0.63
USP11-205ENST00000467378 IGLV5-48A0A075B6I7 105 aa11.1□□□□□ -0.63
USP11-205ENST00000467378 TEX49A0A1B0GTD5 131 aa11.1□□□□□ -0.63
USP11-205ENST00000467378 H0YGX0 51 aa11.1□□□□□ -0.63
USP11-205ENST00000467378 IGLV9-49A0A0B4J1Y8 123 aa11.09□□□□□ -0.63
USP11-205ENST00000467378 M0R143 59 aa11.08□□□□□ -0.64
USP11-205ENST00000467378 LINC00304Q8N9R0 145 aa11.08□□□□□ -0.64
USP11-205ENST00000467378 TRIAP1O43715 76 aa11.07□□□□□ -0.64
USP11-205ENST00000467378 TSPAN13O95857 204 aa11.07□□□□□ -0.64
USP11-205ENST00000467378 MOBPQ13875 183 aa11.07□□□□□ -0.64
USP11-205ENST00000467378 SSBP3-AS1Q7Z2R9 100 aa11.07□□□□□ -0.64
USP11-205ENST00000467378 Q8N377 158 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms