RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 NPC2P61916 151 aa8.82□□□□□ -1
HMGXB4-206ENST00000466438 C1orf137Q5JT78 98 aa8.82□□□□□ -1
HMGXB4-206ENST00000466438 H0Y9J4 135 aa8.81□□□□□ -1
HMGXB4-206ENST00000466438 NHP2Q9NX24 153 aaKnown RBP8.81□□□□□ -1
HMGXB4-206ENST00000466438 A4D1N5 150 aa8.8□□□□□ -1
HMGXB4-206ENST00000466438 NDUFC2-KCTD14E9PQ53 114 aa8.8□□□□□ -1
HMGXB4-206ENST00000466438 RPL13AP40429 203 aaKnown RBP8.8□□□□□ -1
HMGXB4-206ENST00000466438 C9orf116Q5BN46 136 aaPredicted RBP8.8□□□□□ -1
HMGXB4-206ENST00000466438 KRTAP1-4P0C5Y4 121 aa8.79□□□□□ -1
HMGXB4-206ENST00000466438 A0A0B4J2C4 111 aa8.78□□□□□ -1
HMGXB4-206ENST00000466438 LOC107984156A0A0G2JMH3 177 aa8.78□□□□□ -1
HMGXB4-206ENST00000466438 IGLV7-43P04211 117 aa8.78□□□□□ -1
HMGXB4-206ENST00000466438 TLX1NBP0CAT3 122 aa8.78□□□□□ -1
HMGXB4-206ENST00000466438 LINC01547P58512 204 aaPredicted RBP8.78□□□□□ -1
HMGXB4-206ENST00000466438 ARL17AQ8IVW1 177 aa8.78□□□□□ -1
HMGXB4-206ENST00000466438 RAB37Q96AX2 223 aa8.78□□□□□ -1
HMGXB4-206ENST00000466438 SND1-IT1Q9HBX3 110 aa8.78□□□□□ -1
HMGXB4-206ENST00000466438 A0A1B0GWB2 263 aa8.77□□□□□ -1.01
HMGXB4-206ENST00000466438 SOSTDC1Q6X4U4 206 aa8.77□□□□□ -1.01
HMGXB4-206ENST00000466438 LOC107984640A0A0U1RRK4 108 aa8.76□□□□□ -1.01
HMGXB4-206ENST00000466438 A0A1W2PNN7 141 aa8.76□□□□□ -1.01
HMGXB4-206ENST00000466438 RPL18AQ02543 176 aaKnown RBP8.76□□□□□ -1.01
HMGXB4-206ENST00000466438 NDUFC2O95298 119 aa8.75□□□□□ -1.01
HMGXB4-206ENST00000466438 TSPAN13O95857 204 aa8.75□□□□□ -1.01
HMGXB4-206ENST00000466438 CFC1BP0CG36 223 aa8.75□□□□□ -1.01
HMGXB4-206ENST00000466438 CFC1P0CG37 223 aa8.75□□□□□ -1.01
HMGXB4-206ENST00000466438 K7ERJ3 54 aa8.74□□□□□ -1.01
HMGXB4-206ENST00000466438 PRO1854Q9UHT4 67 aa8.74□□□□□ -1.01
HMGXB4-206ENST00000466438 TRAV13-2A0A0B4J235 113 aa8.73□□□□□ -1.01
HMGXB4-206ENST00000466438 C21orf62-AS1Q17RA5 79 aa8.73□□□□□ -1.01
HMGXB4-206ENST00000466438 GAGE2BQ13066 116 aa8.72□□□□□ -1.01
HMGXB4-206ENST00000466438 GAGE2EQ4V326 116 aa8.72□□□□□ -1.01
HMGXB4-206ENST00000466438 CDIP1Q9H305 208 aa8.72□□□□□ -1.01
HMGXB4-206ENST00000466438 GAGE2DQ9UEU5 116 aa8.72□□□□□ -1.01
HMGXB4-206ENST00000466438 KRTAP9-7A8MTY7 169 aa8.71□□□□□ -1.02
HMGXB4-206ENST00000466438 TAX1BP3O14907 124 aa8.71□□□□□ -1.02
HMGXB4-206ENST00000466438 PHF5AQ7RTV0 110 aaKnown RBP8.71□□□□□ -1.02
HMGXB4-206ENST00000466438 XAGE1AQ9HD64 81 aa8.71□□□□□ -1.02
HMGXB4-206ENST00000466438 Q1RN00 199 aa8.7□□□□□ -1.02
HMGXB4-206ENST00000466438 TRBV10-2A0A0K0K1G8 114 aa8.69□□□□□ -1.02
HMGXB4-206ENST00000466438 C9orf118A6NHY6 69 aa8.68□□□□□ -1.02
HMGXB4-206ENST00000466438 TPRXLQ17RH7 258 aa8.68□□□□□ -1.02
HMGXB4-206ENST00000466438 LYRM7Q5U5X0 104 aa8.68□□□□□ -1.02
HMGXB4-206ENST00000466438 IGKV2-28A0A075B6P5 120 aa8.67□□□□□ -1.02
HMGXB4-206ENST00000466438 NCR3O14931 201 aa8.67□□□□□ -1.02
HMGXB4-206ENST00000466438 IGKV2D-28P01615 120 aa8.67□□□□□ -1.02
HMGXB4-206ENST00000466438 H3BUT2 72 aa8.66□□□□□ -1.02
HMGXB4-206ENST00000466438 H7C2G1 150 aa8.66□□□□□ -1.02
HMGXB4-206ENST00000466438 S100A7L2Q5SY68 101 aa8.66□□□□□ -1.02
HMGXB4-206ENST00000466438 C9orf129Q5T035 196 aaKnown RBP8.66□□□□□ -1.02
HMGXB4-206ENST00000466438 LINC00337Q8N6G1 96 aa8.66□□□□□ -1.02
HMGXB4-206ENST00000466438 NKAPP1Q8N9T2 125 aa8.66□□□□□ -1.02
HMGXB4-206ENST00000466438 OR13C6PQ8NH95 151 aa8.66□□□□□ -1.02
HMGXB4-206ENST00000466438 TMEM126AQ9H061 195 aa8.66□□□□□ -1.02
HMGXB4-206ENST00000466438 CBY1Q9Y3M2 126 aa8.66□□□□□ -1.02
HMGXB4-206ENST00000466438 VPREB1P12018 145 aa8.65□□□□□ -1.02
HMGXB4-206ENST00000466438 PSMB2P49721 201 aa8.65□□□□□ -1.02
HMGXB4-206ENST00000466438 M0R378 163 aa8.64□□□□□ -1.03
HMGXB4-206ENST00000466438 FABP2P12104 132 aa8.64□□□□□ -1.03
HMGXB4-206ENST00000466438 IGLV5-37A0A075B6J1 123 aa8.63□□□□□ -1.03
HMGXB4-206ENST00000466438 A0A1W2PPM0 123 aa8.63□□□□□ -1.03
HMGXB4-206ENST00000466438 COX6CP09669 75 aa8.63□□□□□ -1.03
HMGXB4-206ENST00000466438 CRYGAP11844 174 aa8.63□□□□□ -1.03
HMGXB4-206ENST00000466438 KRTAP11-1Q8IUC1 163 aa8.63□□□□□ -1.03
HMGXB4-206ENST00000466438 Q8NDZ9 215 aa8.62□□□□□ -1.03
HMGXB4-206ENST00000466438 RETNLBQ9BQ08 111 aa8.61□□□□□ -1.03
HMGXB4-206ENST00000466438 NAA38Q9BRA0 125 aaKnown RBP8.61□□□□□ -1.03
HMGXB4-206ENST00000466438 A0A1B0GV90 55 aa8.6□□□□□ -1.03
HMGXB4-206ENST00000466438 IGLV6-57P01721 117 aa8.6□□□□□ -1.03
HMGXB4-206ENST00000466438 SCGB1C2P0DMR2 95 aa8.6□□□□□ -1.03
HMGXB4-206ENST00000466438 RPL28P46779 137 aaKnown RBP8.6□□□□□ -1.03
HMGXB4-206ENST00000466438 VAMP3Q15836 100 aa8.6□□□□□ -1.03
HMGXB4-206ENST00000466438 FAM19A5Q7Z5A7 132 aaPredicted RBP8.6□□□□□ -1.03
HMGXB4-206ENST00000466438 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.59□□□□□ -1.03
HMGXB4-206ENST00000466438 TRIAP1O43715 76 aa8.59□□□□□ -1.03
HMGXB4-206ENST00000466438 GTF2H5Q6ZYL4 71 aa8.58□□□□□ -1.04
HMGXB4-206ENST00000466438 SMIM11BQ8TCY0 68 aa8.58□□□□□ -1.04
HMGXB4-206ENST00000466438 IGLV7-46A0A075B6I9 117 aa8.57□□□□□ -1.04
HMGXB4-206ENST00000466438 TRBV20-1A0A075B6N2 111 aa8.57□□□□□ -1.04
HMGXB4-206ENST00000466438 TRAV23DV6A0A075B6W5 121 aa8.57□□□□□ -1.04
HMGXB4-206ENST00000466438 TRBV10-3A0A0K0K1G6 114 aa8.57□□□□□ -1.04
HMGXB4-206ENST00000466438 FAM168BA1KXE4 195 aa8.57□□□□□ -1.04
HMGXB4-206ENST00000466438 M0QXV9 152 aa8.57□□□□□ -1.04
HMGXB4-206ENST00000466438 MRPL55Q7Z7F7 128 aaKnown RBP8.57□□□□□ -1.04
HMGXB4-206ENST00000466438 SPCS1Q9Y6A9 102 aa8.57□□□□□ -1.04
HMGXB4-206ENST00000466438 C22orf24Q9Y442 160 aa8.56□□□□□ -1.04
HMGXB4-206ENST00000466438 A0A087X002 238 aa8.55□□□□□ -1.04
HMGXB4-206ENST00000466438 GAGE10A6NGK3 116 aa8.55□□□□□ -1.04
HMGXB4-206ENST00000466438 H0YGX0 51 aa8.55□□□□□ -1.04
HMGXB4-206ENST00000466438 K7EP34 96 aa8.55□□□□□ -1.04
HMGXB4-206ENST00000466438 TYMSOSQ8TAI1 123 aa8.55□□□□□ -1.04
HMGXB4-206ENST00000466438 PRYO14603 147 aa8.54□□□□□ -1.04
HMGXB4-206ENST00000466438 ZNF73O43830 326 aaPredicted RBP8.53□□□□□ -1.04
HMGXB4-206ENST00000466438 ATXN8Q156A1 80 aa8.53□□□□□ -1.04
HMGXB4-206ENST00000466438 SNCGO76070 127 aa8.52□□□□□ -1.05
HMGXB4-206ENST00000466438 C6orf99Q4VX62 202 aa8.52□□□□□ -1.05
HMGXB4-206ENST00000466438 KRTAP7-1Q8IUC3 87 aa8.52□□□□□ -1.05
HMGXB4-206ENST00000466438 LINC00167Q96N53 147 aa8.52□□□□□ -1.05
HMGXB4-206ENST00000466438 KRTAP4-1Q9BYQ7 146 aa8.52□□□□□ -1.05
HMGXB4-206ENST00000466438 KCNQ1DNQ9H478 68 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms