RNA–Protein interactions for RNA: ENST00000465741.1

SPTA1-203, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 718 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-203ENST00000465741 CEND1Q8N111 149 aa4.26□□□□□ -1.73
SPTA1-203ENST00000465741 Q8N814 137 aa4.26□□□□□ -1.73
SPTA1-203ENST00000465741 LINC00308Q8TCZ7 52 aa4.26□□□□□ -1.73
SPTA1-203ENST00000465741 SPANXDQ9BXN6 97 aa4.26□□□□□ -1.73
SPTA1-203ENST00000465741 SPANXB1Q9NS25 103 aaPredicted RBP4.26□□□□□ -1.73
SPTA1-203ENST00000465741 SPANXCQ9NY87 97 aa4.26□□□□□ -1.73
SPTA1-203ENST00000465741 RYR2Q92736 4967 aa4.26□□□□□ -1.73
SPTA1-203ENST00000465741 DNAH10Q8IVF4 4471 aa4.26□□□□□ -1.73
SPTA1-203ENST00000465741 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.25□□□□□ -1.73
SPTA1-203ENST00000465741 M0R143 59 aa4.25□□□□□ -1.73
SPTA1-203ENST00000465741 IFITM1P13164 125 aa4.25□□□□□ -1.73
SPTA1-203ENST00000465741 FXYD2P54710 66 aa4.25□□□□□ -1.73
SPTA1-203ENST00000465741 CNBPP62633 177 aaKnown RBP4.25□□□□□ -1.73
SPTA1-203ENST00000465741 SOSTDC1Q6X4U4 206 aa4.25□□□□□ -1.73
SPTA1-203ENST00000465741 Q6ZVH6 145 aa4.25□□□□□ -1.73
SPTA1-203ENST00000465741 SND1-IT1Q9HBX3 110 aa4.25□□□□□ -1.73
SPTA1-203ENST00000465741 NDUFC2-KCTD14E9PQ53 114 aa4.24□□□□□ -1.73
SPTA1-203ENST00000465741 RPL18AQ02543 176 aaKnown RBP4.24□□□□□ -1.73
SPTA1-203ENST00000465741 SNHG12Q9BXW3 62 aa4.24□□□□□ -1.73
SPTA1-203ENST00000465741 XAGE1AQ9HD64 81 aa4.24□□□□□ -1.73
SPTA1-203ENST00000465741 DNAH17Q9UFH2 4485 aa4.24□□□□□ -1.73
SPTA1-203ENST00000465741 LOC107984640A0A0U1RRK4 108 aa4.23□□□□□ -1.73
SPTA1-203ENST00000465741 PRR3P79522 188 aaKnown RBP4.23□□□□□ -1.73
SPTA1-203ENST00000465741 COPS9Q8WXC6 57 aa4.23□□□□□ -1.73
SPTA1-203ENST00000465741 HYDINQ4G0P3 5121 aa4.23□□□□□ -1.73
SPTA1-203ENST00000465741 LOC107984156A0A0G2JMH3 177 aa4.22□□□□□ -1.73
SPTA1-203ENST00000465741 TLX1NBP0CAT3 122 aa4.22□□□□□ -1.73
SPTA1-203ENST00000465741 SDIM1Q6ZPB5 146 aa4.22□□□□□ -1.73
SPTA1-203ENST00000465741 ARL17AQ8IVW1 177 aa4.22□□□□□ -1.73
SPTA1-203ENST00000465741 C9orf163Q8N9P6 203 aa4.22□□□□□ -1.73
SPTA1-203ENST00000465741 DPH3Q96FX2 82 aa4.22□□□□□ -1.73
SPTA1-203ENST00000465741 NHP2Q9NX24 153 aaKnown RBP4.22□□□□□ -1.73
SPTA1-203ENST00000465741 EPPK1P58107 5090 aaKnown RBP4.22□□□□□ -1.73
SPTA1-203ENST00000465741 IGKV2-24A0A0C4DH68 120 aa4.21□□□□□ -1.74
SPTA1-203ENST00000465741 A6NDN8 102 aa4.21□□□□□ -1.74
SPTA1-203ENST00000465741 K7ERJ3 54 aa4.21□□□□□ -1.74
SPTA1-203ENST00000465741 C9orf129Q5T035 196 aaKnown RBP4.21□□□□□ -1.74
SPTA1-203ENST00000465741 Q8NDZ9 215 aa4.21□□□□□ -1.74
SPTA1-203ENST00000465741 DNAH11Q96DT5 4516 aa4.21□□□□□ -1.74
SPTA1-203ENST00000465741 A0A096LNI7 61 aa4.2□□□□□ -1.74
SPTA1-203ENST00000465741 A0A1B0GWB2 263 aa4.2□□□□□ -1.74
SPTA1-203ENST00000465741 C16orf90A8MZG2 172 aa4.2□□□□□ -1.74
SPTA1-203ENST00000465741 CHTF8P0CG12 524 aa4.2□□□□□ -1.74
SPTA1-203ENST00000465741 COL5A1-AS1Q5SY13 56 aa4.2□□□□□ -1.74
SPTA1-203ENST00000465741 LINC00336Q6ZUF6 198 aa4.2□□□□□ -1.74
SPTA1-203ENST00000465741 RAB37Q96AX2 223 aa4.2□□□□□ -1.74
SPTA1-203ENST00000465741 OBSCNQ5VST9 7968 aa4.19□□□□□ -1.74
SPTA1-203ENST00000465741 IGKV2-28A0A075B6P5 120 aa4.19□□□□□ -1.74
SPTA1-203ENST00000465741 A0A1W2PNN7 141 aa4.19□□□□□ -1.74
SPTA1-203ENST00000465741 H7C2G1 150 aa4.19□□□□□ -1.74
SPTA1-203ENST00000465741 NCR3O14931 201 aa4.19□□□□□ -1.74
SPTA1-203ENST00000465741 IGKV2D-28P01615 120 aa4.19□□□□□ -1.74
SPTA1-203ENST00000465741 OR13C6PQ8NH95 151 aa4.19□□□□□ -1.74
SPTA1-203ENST00000465741 BIRC6Q9NR09 4857 aa4.18□□□□□ -1.74
SPTA1-203ENST00000465741 TRAV13-2A0A0B4J235 113 aa4.18□□□□□ -1.74
SPTA1-203ENST00000465741 A0A0B4J2C4 111 aa4.18□□□□□ -1.74
SPTA1-203ENST00000465741 A0A1B0GVY2 172 aa4.18□□□□□ -1.74
SPTA1-203ENST00000465741 PANO1I0J062 215 aa4.18□□□□□ -1.74
SPTA1-203ENST00000465741 TAX1BP3O14907 124 aa4.18□□□□□ -1.74
SPTA1-203ENST00000465741 NDUFC2O95298 119 aa4.18□□□□□ -1.74
SPTA1-203ENST00000465741 FAM19A5Q7Z5A7 132 aaPredicted RBP4.18□□□□□ -1.74
SPTA1-203ENST00000465741 LINC00337Q8N6G1 96 aa4.18□□□□□ -1.74
SPTA1-203ENST00000465741 PRO1854Q9UHT4 67 aa4.18□□□□□ -1.74
SPTA1-203ENST00000465741 PKIGQ9Y2B9 76 aa4.18□□□□□ -1.74
SPTA1-203ENST00000465741 FAT2Q9NYQ8 4349 aa4.17□□□□□ -1.74
SPTA1-203ENST00000465741 M0R378 163 aa4.17□□□□□ -1.74
SPTA1-203ENST00000465741 RPL13AP40429 203 aaKnown RBP4.17□□□□□ -1.74
SPTA1-203ENST00000465741 KRTAP10-1P60331 282 aa4.17□□□□□ -1.74
SPTA1-203ENST00000465741 NKAPP1Q8N9T2 125 aa4.17□□□□□ -1.74
SPTA1-203ENST00000465741 NAA38Q9BRA0 125 aaKnown RBP4.17□□□□□ -1.74
SPTA1-203ENST00000465741 LINC00474Q9P2X8 69 aa4.17□□□□□ -1.74
SPTA1-203ENST00000465741 C22orf24Q9Y442 160 aa4.17□□□□□ -1.74
SPTA1-203ENST00000465741 TRBV10-2A0A0K0K1G8 114 aa4.16□□□□□ -1.74
SPTA1-203ENST00000465741 S100A7L2Q5SY68 101 aa4.16□□□□□ -1.74
SPTA1-203ENST00000465741 LCE3CQ5T5A8 94 aa4.16□□□□□ -1.74
SPTA1-203ENST00000465741 C7orf33Q8WU49 177 aa4.16□□□□□ -1.74
SPTA1-203ENST00000465741 HECTD4Q9Y4D8 3996 aa4.16□□□□□ -1.74
SPTA1-203ENST00000465741 TRBV10-3A0A0K0K1G6 114 aa4.15□□□□□ -1.75
SPTA1-203ENST00000465741 H3BUT2 72 aa4.15□□□□□ -1.75
SPTA1-203ENST00000465741 TSPAN13O95857 204 aa4.15□□□□□ -1.75
SPTA1-203ENST00000465741 SCGB1C2P0DMR2 95 aa4.15□□□□□ -1.75
SPTA1-203ENST00000465741 LINC00167Q96N53 147 aa4.15□□□□□ -1.75
SPTA1-203ENST00000465741 TMEM126AQ9H061 195 aa4.15□□□□□ -1.75
SPTA1-203ENST00000465741 A8MU10 97 aa4.14□□□□□ -1.75
SPTA1-203ENST00000465741 IGLV6-57P01721 117 aa4.14□□□□□ -1.75
SPTA1-203ENST00000465741 KRTAP1-4P0C5Y4 121 aa4.14□□□□□ -1.75
SPTA1-203ENST00000465741 PSMB2P49721 201 aa4.14□□□□□ -1.75
SPTA1-203ENST00000465741 PHF5AQ7RTV0 110 aaKnown RBP4.14□□□□□ -1.75
SPTA1-203ENST00000465741 MRPL55Q7Z7F7 128 aaKnown RBP4.14□□□□□ -1.75
SPTA1-203ENST00000465741 SMIM11BQ8TCY0 68 aa4.14□□□□□ -1.75
SPTA1-203ENST00000465741 SPACA4Q8TDM5 124 aa4.14□□□□□ -1.75
SPTA1-203ENST00000465741 FRAS1Q86XX4 4008 aa4.13□□□□□ -1.75
SPTA1-203ENST00000465741 M0QXV9 152 aa4.13□□□□□ -1.75
SPTA1-203ENST00000465741 DNAH5Q8TE73 4624 aa4.13□□□□□ -1.75
SPTA1-203ENST00000465741 DNAH8Q96JB1 4490 aa4.13□□□□□ -1.75
SPTA1-203ENST00000465741 IGLV1-50A0A075B6I6 118 aa4.12□□□□□ -1.75
SPTA1-203ENST00000465741 RPL28P46779 137 aaKnown RBP4.12□□□□□ -1.75
SPTA1-203ENST00000465741 KCNQ1DNQ9H478 68 aa4.12□□□□□ -1.75
SPTA1-203ENST00000465741 PLAC8Q9NZF1 115 aa4.12□□□□□ -1.75
SPTA1-203ENST00000465741 DYNC1H1Q14204 4646 aaKnown RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 169.5 ms