RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 TRAV23DV6A0A075B6W5 121 aa9.6□□□□□ -0.87
TMEM39A-203ENST00000461654 VAMP3Q15836 100 aa9.6□□□□□ -0.87
TMEM39A-203ENST00000461654 TRIAP1O43715 76 aa9.59□□□□□ -0.87
TMEM39A-203ENST00000461654 KRTAP7-1Q8IUC3 87 aa9.59□□□□□ -0.87
TMEM39A-203ENST00000461654 LINC00167Q96N53 147 aa9.59□□□□□ -0.87
TMEM39A-203ENST00000461654 Q6ZSA8 131 aa9.58□□□□□ -0.88
TMEM39A-203ENST00000461654 A0A087WYN8 130 aa9.57□□□□□ -0.88
TMEM39A-203ENST00000461654 A0A1B0GV90 55 aa9.57□□□□□ -0.88
TMEM39A-203ENST00000461654 RPL37AP8A6NKH3 93 aa9.57□□□□□ -0.88
TMEM39A-203ENST00000461654 PANO1I0J062 215 aa9.57□□□□□ -0.88
TMEM39A-203ENST00000461654 UBE2BP63146 152 aa9.57□□□□□ -0.88
TMEM39A-203ENST00000461654 Q5VSD8 79 aa9.57□□□□□ -0.88
TMEM39A-203ENST00000461654 DIRC1Q969H9 104 aa9.57□□□□□ -0.88
TMEM39A-203ENST00000461654 FAM30AQ9NZY2 134 aa9.57□□□□□ -0.88
TMEM39A-203ENST00000461654 IGLV1-50A0A075B6I6 118 aa9.56□□□□□ -0.88
TMEM39A-203ENST00000461654 H0YGX0 51 aa9.56□□□□□ -0.88
TMEM39A-203ENST00000461654 PRYO14603 147 aa9.56□□□□□ -0.88
TMEM39A-203ENST00000461654 ZNF73O43830 326 aaPredicted RBP9.56□□□□□ -0.88
TMEM39A-203ENST00000461654 C6orf99Q4VX62 202 aa9.56□□□□□ -0.88
TMEM39A-203ENST00000461654 KCNQ1DNQ9H478 68 aa9.56□□□□□ -0.88
TMEM39A-203ENST00000461654 SPCS1Q9Y6A9 102 aa9.56□□□□□ -0.88
TMEM39A-203ENST00000461654 TRBV20-1A0A075B6N2 111 aa9.55□□□□□ -0.88
TMEM39A-203ENST00000461654 FAM229AH3BQW9 127 aa9.55□□□□□ -0.88
TMEM39A-203ENST00000461654 GTF2H5Q6ZYL4 71 aa9.55□□□□□ -0.88
TMEM39A-203ENST00000461654 PLAC8Q9NZF1 115 aa9.55□□□□□ -0.88
TMEM39A-203ENST00000461654 SNCGO76070 127 aa9.54□□□□□ -0.88
TMEM39A-203ENST00000461654 SMR3BP02814 79 aaPredicted RBP9.54□□□□□ -0.88
TMEM39A-203ENST00000461654 INAFM2P0DMQ5 153 aa9.54□□□□□ -0.88
TMEM39A-203ENST00000461654 PHF5AQ7RTV0 110 aaKnown RBP9.54□□□□□ -0.88
TMEM39A-203ENST00000461654 FAT1Q14517 4588 aa9.53□□□□□ -0.88
TMEM39A-203ENST00000461654 TRBV7-6A0A0J9YX20 115 aa9.53□□□□□ -0.88
TMEM39A-203ENST00000461654 K7EP34 96 aa9.52□□□□□ -0.89
TMEM39A-203ENST00000461654 COX7BP24311 80 aa9.52□□□□□ -0.89
TMEM39A-203ENST00000461654 ATXN8Q156A1 80 aa9.52□□□□□ -0.89
TMEM39A-203ENST00000461654 ETDCA0A1B0GVM5 59 aa9.51□□□□□ -0.89
TMEM39A-203ENST00000461654 HAMPP81172 84 aa9.51□□□□□ -0.89
TMEM39A-203ENST00000461654 REG3GQ6UW15 175 aa9.51□□□□□ -0.89
TMEM39A-203ENST00000461654 TCL1BO95988 128 aa9.5□□□□□ -0.89
TMEM39A-203ENST00000461654 CLEC2BQ92478 149 aa9.5□□□□□ -0.89
TMEM39A-203ENST00000461654 SLC25A20O43772 301 aa9.49□□□□□ -0.89
TMEM39A-203ENST00000461654 LST1O00453 97 aa9.47□□□□□ -0.89
TMEM39A-203ENST00000461654 SPRR1AP35321 89 aa9.47□□□□□ -0.89
TMEM39A-203ENST00000461654 ELOF1P60002 83 aaKnown RBP9.47□□□□□ -0.89
TMEM39A-203ENST00000461654 CIRBP-AS1Q8TBR5 109 aa9.47□□□□□ -0.89
TMEM39A-203ENST00000461654 DNAH8Q96JB1 4490 aa9.46□□□□□ -0.89
TMEM39A-203ENST00000461654 A0A1B0GX51 115 aa9.46□□□□□ -0.9
TMEM39A-203ENST00000461654 DNAL4O96015 105 aa9.46□□□□□ -0.9
TMEM39A-203ENST00000461654 SCXQ7RTU7 201 aa9.46□□□□□ -0.9
TMEM39A-203ENST00000461654 H3BMG7 143 aa9.45□□□□□ -0.9
TMEM39A-203ENST00000461654 TRACP01848 142 aa9.45□□□□□ -0.9
TMEM39A-203ENST00000461654 PLA2G1BP04054 148 aaKnown RBP9.45□□□□□ -0.9
TMEM39A-203ENST00000461654 UBE2V1Q13404 147 aa9.45□□□□□ -0.9
TMEM39A-203ENST00000461654 LINC00575Q6W349 94 aa9.45□□□□□ -0.9
TMEM39A-203ENST00000461654 FAM19A1Q7Z5A9 133 aa9.44□□□□□ -0.9
TMEM39A-203ENST00000461654 hADV29S1A0JD25 119 aa9.43□□□□□ -0.9
TMEM39A-203ENST00000461654 B5MCH6 92 aa9.43□□□□□ -0.9
TMEM39A-203ENST00000461654 Q6ZRX8 168 aa9.43□□□□□ -0.9
TMEM39A-203ENST00000461654 LINC00528Q8N1L1 170 aa9.43□□□□□ -0.9
TMEM39A-203ENST00000461654 FAM218AQ96MZ4 157 aa9.43□□□□□ -0.9
TMEM39A-203ENST00000461654 DHRS4-AS1Q9P1J3 65 aa9.43□□□□□ -0.9
TMEM39A-203ENST00000461654 KRTAP4-16G5E9R7 235 aaPredicted RBP9.42□□□□□ -0.9
TMEM39A-203ENST00000461654 BCE1O60756 84 aa9.42□□□□□ -0.9
TMEM39A-203ENST00000461654 UBE2AP49459 152 aa9.42□□□□□ -0.9
TMEM39A-203ENST00000461654 KRTAP11-1Q8IUC1 163 aa9.41□□□□□ -0.9
TMEM39A-203ENST00000461654 C9JAW5 83 aa9.4□□□□□ -0.9
TMEM39A-203ENST00000461654 SRRM2Q9UQ35 2752 aaKnown RBP9.39□□□□□ -0.91
TMEM39A-203ENST00000461654 GHRHP01286 108 aa9.39□□□□□ -0.91
TMEM39A-203ENST00000461654 PSORS1C2Q9UIG4 136 aa9.39□□□□□ -0.91
TMEM39A-203ENST00000461654 H0Y9J4 135 aa9.38□□□□□ -0.91
TMEM39A-203ENST00000461654 PRLHP81277 87 aa9.38□□□□□ -0.91
TMEM39A-203ENST00000461654 C1orf137Q5JT78 98 aa9.38□□□□□ -0.91
TMEM39A-203ENST00000461654 VPS13BQ7Z7G8 4022 aa9.38□□□□□ -0.91
TMEM39A-203ENST00000461654 F8W1H4 67 aa9.37□□□□□ -0.91
TMEM39A-203ENST00000461654 KRTAP10-4P60372 401 aaPredicted RBP9.37□□□□□ -0.91
TMEM39A-203ENST00000461654 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.37□□□□□ -0.91
TMEM39A-203ENST00000461654 ORMDL1Q9P0S3 153 aa9.37□□□□□ -0.91
TMEM39A-203ENST00000461654 H3BQ85 93 aa9.36□□□□□ -0.91
TMEM39A-203ENST00000461654 OCIAD2Q56VL3 154 aa9.36□□□□□ -0.91
TMEM39A-203ENST00000461654 Q9BRP9 147 aa9.35□□□□□ -0.91
TMEM39A-203ENST00000461654 HIGD2AQ9BW72 106 aa9.35□□□□□ -0.91
TMEM39A-203ENST00000461654 KRTAP29-1A8MX34 341 aaPredicted RBP9.34□□□□□ -0.91
TMEM39A-203ENST00000461654 H3BT86 120 aa9.34□□□□□ -0.91
TMEM39A-203ENST00000461654 BAALC-AS2P0C853 105 aa9.34□□□□□ -0.91
TMEM39A-203ENST00000461654 Q6ZQY7 126 aa9.34□□□□□ -0.91
TMEM39A-203ENST00000461654 MTURNQ8N3F0 131 aa9.34□□□□□ -0.91
TMEM39A-203ENST00000461654 FLG2Q5D862 2391 aaPredicted RBP9.33□□□□□ -0.92
TMEM39A-203ENST00000461654 ANKRD29Q8N6D5 301 aa9.33□□□□□ -0.92
TMEM39A-203ENST00000461654 HERC1Q15751 4861 aa9.32□□□□□ -0.92
TMEM39A-203ENST00000461654 MYCBP2O75592 4640 aa9.32□□□□□ -0.92
TMEM39A-203ENST00000461654 SMCR5Q8TEV8 140 aa9.32□□□□□ -0.92
TMEM39A-203ENST00000461654 TMEM256-PLSCR3K7ERE1 68 aa9.31□□□□□ -0.92
TMEM39A-203ENST00000461654 IGLV7-43P04211 117 aa9.31□□□□□ -0.92
TMEM39A-203ENST00000461654 PRO0461Q9UI25 63 aa9.31□□□□□ -0.92
TMEM39A-203ENST00000461654 DMBT1Q9UGM3 2413 aaPredicted RBP9.31□□□□□ -0.92
TMEM39A-203ENST00000461654 ZNF861PO60384 105 aa9.3□□□□□ -0.92
TMEM39A-203ENST00000461654 J3QL48 77 aa9.29□□□□□ -0.92
TMEM39A-203ENST00000461654 KRTAP13-1Q8IUC0 172 aa9.29□□□□□ -0.92
TMEM39A-203ENST00000461654 DEFB105AQ8NG35 78 aa9.29□□□□□ -0.92
TMEM39A-203ENST00000461654 ERC2-IT1O76042 136 aa9.28□□□□□ -0.92
TMEM39A-203ENST00000461654 PPDPFLQ8WWR9 84 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms