RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 TRBV10-2A0A0K0K1G8 114 aa9.44□□□□□ -0.9
COL7A1-203ENST00000459756 PRR4Q16378 134 aa9.44□□□□□ -0.9
COL7A1-203ENST00000459756 LINC00308Q8TCZ7 52 aa9.44□□□□□ -0.9
COL7A1-203ENST00000459756 ETDCA0A1B0GVM5 59 aa9.43□□□□□ -0.9
COL7A1-203ENST00000459756 SPATA45Q537H7 98 aa9.43□□□□□ -0.9
COL7A1-203ENST00000459756 VAMP8Q9BV40 100 aa9.43□□□□□ -0.9
COL7A1-203ENST00000459756 SPANXB1Q9NS25 103 aaPredicted RBP9.43□□□□□ -0.9
COL7A1-203ENST00000459756 KRTAP4-16G5E9R7 235 aaPredicted RBP9.42□□□□□ -0.9
COL7A1-203ENST00000459756 ZNF706Q9Y5V0 76 aaPredicted RBP9.42□□□□□ -0.9
COL7A1-203ENST00000459756 NDUFC2O95298 119 aa9.41□□□□□ -0.9
COL7A1-203ENST00000459756 DDTP30046 118 aa9.41□□□□□ -0.9
COL7A1-203ENST00000459756 PYY3Q5JQD4 70 aa9.41□□□□□ -0.9
COL7A1-203ENST00000459756 LINC00304Q8N9R0 145 aa9.41□□□□□ -0.9
COL7A1-203ENST00000459756 SPRR4Q96PI1 79 aa9.41□□□□□ -0.9
COL7A1-203ENST00000459756 SPANXDQ9BXN6 97 aa9.41□□□□□ -0.9
COL7A1-203ENST00000459756 SPANXCQ9NY87 97 aa9.41□□□□□ -0.9
COL7A1-203ENST00000459756 C14orf144Q96I85 54 aa9.4□□□□□ -0.9
COL7A1-203ENST00000459756 S100A7L2Q5SY68 101 aa9.39□□□□□ -0.91
COL7A1-203ENST00000459756 COX8AP10176 69 aa9.38□□□□□ -0.91
COL7A1-203ENST00000459756 CTAG1AP78358 180 aa9.38□□□□□ -0.91
COL7A1-203ENST00000459756 SMCR5Q8TEV8 140 aa9.38□□□□□ -0.91
COL7A1-203ENST00000459756 B5MCH6 92 aa9.37□□□□□ -0.91
COL7A1-203ENST00000459756 IGLV6-57P01721 117 aa9.37□□□□□ -0.91
COL7A1-203ENST00000459756 MUSTN1Q8IVN3 82 aa9.37□□□□□ -0.91
COL7A1-203ENST00000459756 OR13C6PQ8NH95 151 aa9.37□□□□□ -0.91
COL7A1-203ENST00000459756 C3orf22Q8N5N4 141 aa9.36□□□□□ -0.91
COL7A1-203ENST00000459756 COPS9Q8WXC6 57 aa9.35□□□□□ -0.91
COL7A1-203ENST00000459756 IFITM1P13164 125 aa9.34□□□□□ -0.91
COL7A1-203ENST00000459756 Q6ZVH6 145 aa9.34□□□□□ -0.91
COL7A1-203ENST00000459756 TRAV23DV6A0A075B6W5 121 aa9.33□□□□□ -0.92
COL7A1-203ENST00000459756 SLC25A34Q6PIV7 304 aa9.33□□□□□ -0.92
COL7A1-203ENST00000459756 Q6ZRX8 168 aa9.33□□□□□ -0.92
COL7A1-203ENST00000459756 LINC00483Q53H64 154 aa9.32□□□□□ -0.92
COL7A1-203ENST00000459756 SPAG11AQ6PDA7 123 aa9.32□□□□□ -0.92
COL7A1-203ENST00000459756 HIST1H4GQ99525 98 aa9.32□□□□□ -0.92
COL7A1-203ENST00000459756 CBY1Q9Y3M2 126 aa9.32□□□□□ -0.92
COL7A1-203ENST00000459756 Q9BRP9 147 aa9.31□□□□□ -0.92
COL7A1-203ENST00000459756 PPDPFQ9H3Y8 114 aa9.31□□□□□ -0.92
COL7A1-203ENST00000459756 DLEU1O43261 78 aa9.3□□□□□ -0.92
COL7A1-203ENST00000459756 ZNF73O43830 326 aaPredicted RBP9.3□□□□□ -0.92
COL7A1-203ENST00000459756 ERC2-IT1O76042 136 aa9.3□□□□□ -0.92
COL7A1-203ENST00000459756 A6NDN8 102 aa9.29□□□□□ -0.92
COL7A1-203ENST00000459756 GAGE2AQ6NT46 116 aa9.29□□□□□ -0.92
COL7A1-203ENST00000459756 LINC00518Q8N0U6 118 aa9.29□□□□□ -0.92
COL7A1-203ENST00000459756 RETNLBQ9BQ08 111 aa9.29□□□□□ -0.92
COL7A1-203ENST00000459756 C4orf48Q5BLP8 95 aa9.28□□□□□ -0.92
COL7A1-203ENST00000459756 C12orf57Q99622 126 aa9.28□□□□□ -0.92
COL7A1-203ENST00000459756 A4D1N5 150 aa9.27□□□□□ -0.93
COL7A1-203ENST00000459756 HINT1P49773 126 aaPredicted RBP9.27□□□□□ -0.93
COL7A1-203ENST00000459756 C2orf91Q6ZV80 131 aa9.27□□□□□ -0.93
COL7A1-203ENST00000459756 Q8NBF4 154 aa9.27□□□□□ -0.93
COL7A1-203ENST00000459756 HIGD1BQ9P298 99 aa9.24□□□□□ -0.93
COL7A1-203ENST00000459756 IGLV7-46A0A075B6I9 117 aa9.23□□□□□ -0.93
COL7A1-203ENST00000459756 TRAV13-2A0A0B4J235 113 aa9.23□□□□□ -0.93
COL7A1-203ENST00000459756 IGLV9-49A0A0B4J1Y8 123 aa9.22□□□□□ -0.93
COL7A1-203ENST00000459756 SPINK1P00995 79 aa9.22□□□□□ -0.93
COL7A1-203ENST00000459756 MOBPQ13875 183 aa9.22□□□□□ -0.93
COL7A1-203ENST00000459756 SSBP3-AS1Q7Z2R9 100 aa9.22□□□□□ -0.93
COL7A1-203ENST00000459756 TPRXLQ17RH7 258 aa9.21□□□□□ -0.94
COL7A1-203ENST00000459756 C6orf99Q4VX62 202 aa9.21□□□□□ -0.94
COL7A1-203ENST00000459756 PRO1933Q9H354 126 aa9.2□□□□□ -0.94
COL7A1-203ENST00000459756 DHRS4-AS1Q9P1J3 65 aa9.2□□□□□ -0.94
COL7A1-203ENST00000459756 UQCR10Q9UDW1 63 aa9.2□□□□□ -0.94
COL7A1-203ENST00000459756 LOC105371267A0A1B0GV96 52 aa9.19□□□□□ -0.94
COL7A1-203ENST00000459756 SMIM6P0DI80 62 aa9.19□□□□□ -0.94
COL7A1-203ENST00000459756 FP248Q71RG6 208 aaPredicted RBP9.19□□□□□ -0.94
COL7A1-203ENST00000459756 COX7BP24311 80 aa9.18□□□□□ -0.94
COL7A1-203ENST00000459756 CEND1Q8N111 149 aa9.18□□□□□ -0.94
COL7A1-203ENST00000459756 ST20-AS1Q8NBB2 130 aa9.18□□□□□ -0.94
COL7A1-203ENST00000459756 SMIM11BQ8TCY0 68 aa9.18□□□□□ -0.94
COL7A1-203ENST00000459756 MUC2Q02817 5179 aa9.17□□□□□ -0.94
COL7A1-203ENST00000459756 H7C2G1 150 aa9.17□□□□□ -0.94
COL7A1-203ENST00000459756 RPS29P62273 56 aaKnown RBP9.17□□□□□ -0.94
COL7A1-203ENST00000459756 TAL2Q16559 108 aa9.17□□□□□ -0.94
COL7A1-203ENST00000459756 RAB37Q96AX2 223 aa9.17□□□□□ -0.94
COL7A1-203ENST00000459756 CDIP1Q9H305 208 aa9.17□□□□□ -0.94
COL7A1-203ENST00000459756 ELOF1P60002 83 aaKnown RBP9.16□□□□□ -0.94
COL7A1-203ENST00000459756 TRBV7-6A0A0J9YX20 115 aa9.15□□□□□ -0.94
COL7A1-203ENST00000459756 HSD52Q0P140 79 aa9.15□□□□□ -0.94
COL7A1-203ENST00000459756 C9orf153Q5TBE3 101 aa9.15□□□□□ -0.94
COL7A1-203ENST00000459756 CFC1BP0CG36 223 aa9.14□□□□□ -0.95
COL7A1-203ENST00000459756 CFC1P0CG37 223 aa9.14□□□□□ -0.95
COL7A1-203ENST00000459756 SPRR1BP22528 89 aa9.14□□□□□ -0.95
COL7A1-203ENST00000459756 FXYD2P54710 66 aa9.14□□□□□ -0.95
COL7A1-203ENST00000459756 TMEM238LA0A1B0GVL6 79 aa9.13□□□□□ -0.95
COL7A1-203ENST00000459756 A6NJY4 79 aa9.13□□□□□ -0.95
COL7A1-203ENST00000459756 A0A0B4J2C4 111 aa9.11□□□□□ -0.95
COL7A1-203ENST00000459756 A0A1B0GWB2 263 aa9.11□□□□□ -0.95
COL7A1-203ENST00000459756 Q1RN00 199 aa9.11□□□□□ -0.95
COL7A1-203ENST00000459756 Q8N377 158 aa9.11□□□□□ -0.95
COL7A1-203ENST00000459756 SLC25A20O43772 301 aa9.1□□□□□ -0.95
COL7A1-203ENST00000459756 NHP2Q9NX24 153 aaKnown RBP9.1□□□□□ -0.95
COL7A1-203ENST00000459756 VAMP3Q15836 100 aa9.09□□□□□ -0.95
COL7A1-203ENST00000459756 LAMTOR3Q9UHA4 124 aa9.09□□□□□ -0.95
COL7A1-203ENST00000459756 K7ERJ3 54 aa9.08□□□□□ -0.96
COL7A1-203ENST00000459756 KRTAP13-3Q3SY46 172 aa9.07□□□□□ -0.96
COL7A1-203ENST00000459756 DEFB105AQ8NG35 78 aa9.07□□□□□ -0.96
COL7A1-203ENST00000459756 A0A0U1RQV1 116 aa9.06□□□□□ -0.96
COL7A1-203ENST00000459756 TEX49A0A1B0GTD5 131 aa9.06□□□□□ -0.96
COL7A1-203ENST00000459756 PRO1854Q9UHT4 67 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms