RNA–Protein interactions for RNA: ENST00000450717.7

SMARCA4-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,506 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-205ENST00000450717 C8orf17Q9NRJ1 99 aa8.64□□□□□ -1.03
SMARCA4-205ENST00000450717 MTORP42345 2549 aa8.63□□□□□ -1.03
SMARCA4-205ENST00000450717 SSBP3-AS1Q7Z2R9 100 aa8.63□□□□□ -1.03
SMARCA4-205ENST00000450717 ZNF861PO60384 105 aa8.62□□□□□ -1.03
SMARCA4-205ENST00000450717 KRTAP1-3Q8IUG1 177 aa8.62□□□□□ -1.03
SMARCA4-205ENST00000450717 EPG5Q9HCE0 2579 aa8.62□□□□□ -1.03
SMARCA4-205ENST00000450717 C9orf163Q8N9P6 203 aa8.61□□□□□ -1.03
SMARCA4-205ENST00000450717 A0A1B0GVX0 72 aa8.61□□□□□ -1.03
SMARCA4-205ENST00000450717 IGLV8-61A0A075B6I0 122 aa8.6□□□□□ -1.03
SMARCA4-205ENST00000450717 POLQO75417 2590 aa8.6□□□□□ -1.03
SMARCA4-205ENST00000450717 LINC01600Q96MT4 127 aa8.59□□□□□ -1.03
SMARCA4-205ENST00000450717 A0A087WTM6 91 aa8.58□□□□□ -1.04
SMARCA4-205ENST00000450717 DSCR10P59022 87 aa8.58□□□□□ -1.04
SMARCA4-205ENST00000450717 ZNF575Q86XF7 245 aa8.58□□□□□ -1.04
SMARCA4-205ENST00000450717 CNBPP62633 177 aaKnown RBP8.58□□□□□ -1.04
SMARCA4-205ENST00000450717 A8MUN3 132 aa8.57□□□□□ -1.04
SMARCA4-205ENST00000450717 UQCR11O14957 56 aa8.57□□□□□ -1.04
SMARCA4-205ENST00000450717 LINC00304Q8N9R0 145 aa8.57□□□□□ -1.04
SMARCA4-205ENST00000450717 KRTAP1-1Q07627 177 aa8.56□□□□□ -1.04
SMARCA4-205ENST00000450717 IGLV5-37A0A075B6J1 123 aa8.56□□□□□ -1.04
SMARCA4-205ENST00000450717 OBSCN-AS1Q96MR7 158 aa8.55□□□□□ -1.04
SMARCA4-205ENST00000450717 H7BZZ5 65 aa8.55□□□□□ -1.04
SMARCA4-205ENST00000450717 LINC00336Q6ZUF6 198 aa8.54□□□□□ -1.04
SMARCA4-205ENST00000450717 FLNBO75369 2602 aaKnown RBP8.54□□□□□ -1.04
SMARCA4-205ENST00000450717 ACANP16112 2415 aa8.53□□□□□ -1.04
SMARCA4-205ENST00000450717 A0A1W2PNN7 141 aa8.53□□□□□ -1.04
SMARCA4-205ENST00000450717 APLNQ9ULZ1 77 aa8.53□□□□□ -1.04
SMARCA4-205ENST00000450717 A0A1W2PNM2 257 aa8.52□□□□□ -1.05
SMARCA4-205ENST00000450717 IGLV5-48A0A075B6I7 105 aa8.51□□□□□ -1.05
SMARCA4-205ENST00000450717 SPRR4Q96PI1 79 aa8.51□□□□□ -1.05
SMARCA4-205ENST00000450717 J3QL48 77 aa8.51□□□□□ -1.05
SMARCA4-205ENST00000450717 IGLV7-43P04211 117 aa8.51□□□□□ -1.05
SMARCA4-205ENST00000450717 SPINT4Q6UDR6 99 aa8.51□□□□□ -1.05
SMARCA4-205ENST00000450717 CASC10Q5T4H9 136 aa8.5□□□□□ -1.05
SMARCA4-205ENST00000450717 GOLGB1Q14789 3259 aaKnown RBP8.5□□□□□ -1.05
SMARCA4-205ENST00000450717 A0A0G2JQZ4 141 aa8.49□□□□□ -1.05
SMARCA4-205ENST00000450717 CD164Q04900 197 aa8.49□□□□□ -1.05
SMARCA4-205ENST00000450717 MIR22HGQ0VDD5 57 aa8.49□□□□□ -1.05
SMARCA4-205ENST00000450717 PSORS1C2Q9UIG4 136 aa8.48□□□□□ -1.05
SMARCA4-205ENST00000450717 SPANXA2-OT1Q8N9U9 137 aa8.47□□□□□ -1.05
SMARCA4-205ENST00000450717 FAM104AQ969W3 186 aa8.46□□□□□ -1.05
SMARCA4-205ENST00000450717 C9orf92A6NGG3 77 aa8.44□□□□□ -1.06
SMARCA4-205ENST00000450717 COX6B2Q6YFQ2 88 aa8.43□□□□□ -1.06
SMARCA4-205ENST00000450717 F8P00451 2351 aa8.42□□□□□ -1.06
SMARCA4-205ENST00000450717 ANAPC11Q9NYG5 84 aa8.42□□□□□ -1.06
SMARCA4-205ENST00000450717 CRIPTQ9P021 101 aa8.41□□□□□ -1.06
SMARCA4-205ENST00000450717 KTN1-AS1Q86SY8 53 aa8.4□□□□□ -1.07
SMARCA4-205ENST00000450717 WIPF1O43516 503 aa8.38□□□□□ -1.07
SMARCA4-205ENST00000450717 DNAH12Q6ZR08 3092 aa8.37□□□□□ -1.07
SMARCA4-205ENST00000450717 OCR1Q9BZK8 76 aa8.37□□□□□ -1.07
SMARCA4-205ENST00000450717 RBM12B-AS1Q9P1G2 102 aa8.36□□□□□ -1.07
SMARCA4-205ENST00000450717 SMR3BP02814 79 aaPredicted RBP8.35□□□□□ -1.07
SMARCA4-205ENST00000450717 LCA10Q71F78 164 aa8.34□□□□□ -1.07
SMARCA4-205ENST00000450717 CDC42SE1Q9NRR8 79 aa8.29□□□□□ -1.08
SMARCA4-205ENST00000450717 Q1T7F1 81 aa8.27□□□□□ -1.09
SMARCA4-205ENST00000450717 Q8N1X5 172 aa8.27□□□□□ -1.09
SMARCA4-205ENST00000450717 SPRR1AP35321 89 aa8.26□□□□□ -1.09
SMARCA4-205ENST00000450717 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.25□□□□□ -1.09
SMARCA4-205ENST00000450717 IGLV7-46A0A075B6I9 117 aa8.24□□□□□ -1.09
SMARCA4-205ENST00000450717 TNP2Q05952 138 aa8.24□□□□□ -1.09
SMARCA4-205ENST00000450717 PRRC2CQ9Y520 2896 aaKnown RBP8.23□□□□□ -1.09
SMARCA4-205ENST00000450717 FAM229BQ4G0N7 80 aa8.22□□□□□ -1.09
SMARCA4-205ENST00000450717 Q8NDZ9 215 aa8.22□□□□□ -1.09
SMARCA4-205ENST00000450717 PLAC8Q9NZF1 115 aa8.2□□□□□ -1.1
SMARCA4-205ENST00000450717 A0A0D9SG42 100 aa8.19□□□□□ -1.1
SMARCA4-205ENST00000450717 HECTD1Q9ULT8 2610 aa8.19□□□□□ -1.1
SMARCA4-205ENST00000450717 MMP24-AS1A0A0U1RRL7 71 aa8.18□□□□□ -1.1
SMARCA4-205ENST00000450717 SPRR1BP22528 89 aa8.18□□□□□ -1.1
SMARCA4-205ENST00000450717 CR1P17927 2039 aa8.17□□□□□ -1.1
SMARCA4-205ENST00000450717 LINC01554Q52M75 96 aa8.16□□□□□ -1.1
SMARCA4-205ENST00000450717 PRR26Q8N8Z3 221 aa8.16□□□□□ -1.1
SMARCA4-205ENST00000450717 CHD7Q9P2D1 2997 aa8.15□□□□□ -1.1
SMARCA4-205ENST00000450717 HRES1P13985 223 aa8.15□□□□□ -1.11
SMARCA4-205ENST00000450717 Q6ZSA8 131 aa8.14□□□□□ -1.11
SMARCA4-205ENST00000450717 FLNAP21333 2647 aaKnown RBP8.14□□□□□ -1.11
SMARCA4-205ENST00000450717 Q5XG85 94 aa8.14□□□□□ -1.11
SMARCA4-205ENST00000450717 Q75L30 129 aa8.13□□□□□ -1.11
SMARCA4-205ENST00000450717 BPTFQ12830 3046 aa8.11□□□□□ -1.11
SMARCA4-205ENST00000450717 CEP350Q5VT06 3117 aa8.11□□□□□ -1.11
SMARCA4-205ENST00000450717 KRTAP26-1Q6PEX3 210 aa8.11□□□□□ -1.11
SMARCA4-205ENST00000450717 LINC00472Q9H8W2 130 aa8.1□□□□□ -1.11
SMARCA4-205ENST00000450717 A0A1B0GU33 70 aa8.09□□□□□ -1.11
SMARCA4-205ENST00000450717 LINC01558Q9Y6Z2 57 aa8.09□□□□□ -1.11
SMARCA4-205ENST00000450717 UTRNP46939 3433 aa8.09□□□□□ -1.12
SMARCA4-205ENST00000450717 ZCCHC13Q8WW36 166 aaKnown RBP8.08□□□□□ -1.12
SMARCA4-205ENST00000450717 ITPR3Q14573 2671 aa8.07□□□□□ -1.12
SMARCA4-205ENST00000450717 CHD9Q3L8U1 2897 aa8.07□□□□□ -1.12
SMARCA4-205ENST00000450717 Q8N9P0 234 aaPredicted RBP8.05□□□□□ -1.12
SMARCA4-205ENST00000450717 MGAM2Q2M2H8 2515 aa8.05□□□□□ -1.12
SMARCA4-205ENST00000450717 USP24Q9UPU5 2620 aa8.04□□□□□ -1.12
SMARCA4-205ENST00000450717 CYSTM1Q9H1C7 97 aa8.04□□□□□ -1.12
SMARCA4-205ENST00000450717 FP248Q71RG6 208 aaPredicted RBP8.02□□□□□ -1.12
SMARCA4-205ENST00000450717 KRTAP1-5Q9BYS1 174 aa8.02□□□□□ -1.13
SMARCA4-205ENST00000450717 LUZP6Q538Z0 58 aa8.01□□□□□ -1.13
SMARCA4-205ENST00000450717 Q5W150 140 aa8.01□□□□□ -1.13
SMARCA4-205ENST00000450717 C5orf42Q9H799 3197 aa8.01□□□□□ -1.13
SMARCA4-205ENST00000450717 H3BS24 57 aa8□□□□□ -1.13
SMARCA4-205ENST00000450717 MAST4O15021 2626 aa8□□□□□ -1.13
SMARCA4-205ENST00000450717 HELZ2Q9BYK8 2649 aaKnown RBP7.99□□□□□ -1.13
SMARCA4-205ENST00000450717 DMAC1Q96GE9 116 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms