RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 IGLV5-37A0A075B6J1 123 aa8.89□□□□□ -0.99
SHMT2-203ENST00000449049 EPM2AB3EWF7 344 aa8.89□□□□□ -0.99
SHMT2-203ENST00000449049 C9JAW5 83 aa8.89□□□□□ -0.99
SHMT2-203ENST00000449049 A0A0B4J2C4 111 aa8.88□□□□□ -0.99
SHMT2-203ENST00000449049 FAM19A5Q7Z5A7 132 aaPredicted RBP8.88□□□□□ -0.99
SHMT2-203ENST00000449049 A0A087WYN8 130 aa8.87□□□□□ -0.99
SHMT2-203ENST00000449049 PLAC8Q9NZF1 115 aa8.87□□□□□ -0.99
SHMT2-203ENST00000449049 DPH3Q96FX2 82 aa8.87□□□□□ -0.99
SHMT2-203ENST00000449049 PRR3P79522 188 aaKnown RBP8.86□□□□□ -0.99
SHMT2-203ENST00000449049 IGKV2-28A0A075B6P5 120 aa8.86□□□□□ -0.99
SHMT2-203ENST00000449049 TRBV10-2A0A0K0K1G8 114 aa8.86□□□□□ -0.99
SHMT2-203ENST00000449049 IGKV2D-28P01615 120 aa8.86□□□□□ -0.99
SHMT2-203ENST00000449049 RPL13AP40429 203 aaKnown RBP8.86□□□□□ -0.99
SHMT2-203ENST00000449049 ATXN8Q156A1 80 aa8.86□□□□□ -0.99
SHMT2-203ENST00000449049 C22orf24Q9Y442 160 aa8.86□□□□□ -0.99
SHMT2-203ENST00000449049 NCR3O14931 201 aa8.85□□□□□ -0.99
SHMT2-203ENST00000449049 NKAPP1Q8N9T2 125 aa8.85□□□□□ -0.99
SHMT2-203ENST00000449049 DNAH8Q96JB1 4490 aa8.85□□□□□ -0.99
SHMT2-203ENST00000449049 CIRBP-AS1Q8TBR5 109 aa8.84□□□□□ -0.99
SHMT2-203ENST00000449049 M0R378 163 aa8.84□□□□□ -0.99
SHMT2-203ENST00000449049 SCXQ7RTU7 201 aa8.84□□□□□ -0.99
SHMT2-203ENST00000449049 DYNC1H1Q14204 4646 aaKnown RBP8.84□□□□□ -0.99
SHMT2-203ENST00000449049 PKHD1P08F94 4074 aa8.83□□□□□ -1
SHMT2-203ENST00000449049 MRPL55Q7Z7F7 128 aaKnown RBP8.83□□□□□ -1
SHMT2-203ENST00000449049 LINC00337Q8N6G1 96 aa8.83□□□□□ -1
SHMT2-203ENST00000449049 C7orf33Q8WU49 177 aa8.83□□□□□ -1
SHMT2-203ENST00000449049 J3KT08 172 aa8.82□□□□□ -1
SHMT2-203ENST00000449049 LRP1BQ9NZR2 4599 aa8.82□□□□□ -1
SHMT2-203ENST00000449049 H7C2G1 150 aa8.81□□□□□ -1
SHMT2-203ENST00000449049 PHF5AQ7RTV0 110 aaKnown RBP8.81□□□□□ -1
SHMT2-203ENST00000449049 TEX49A0A1B0GTD5 131 aa8.81□□□□□ -1
SHMT2-203ENST00000449049 A0A1B0GX51 115 aa8.81□□□□□ -1
SHMT2-203ENST00000449049 LINC00167Q96N53 147 aa8.81□□□□□ -1
SHMT2-203ENST00000449049 Q1RN00 199 aa8.8□□□□□ -1
SHMT2-203ENST00000449049 TRAV13-2A0A0B4J235 113 aa8.8□□□□□ -1
SHMT2-203ENST00000449049 HAMPP81172 84 aa8.8□□□□□ -1
SHMT2-203ENST00000449049 OR13C6PQ8NH95 151 aa8.8□□□□□ -1
SHMT2-203ENST00000449049 IGLV6-57P01721 117 aa8.79□□□□□ -1
SHMT2-203ENST00000449049 TRBV10-3A0A0K0K1G6 114 aa8.78□□□□□ -1
SHMT2-203ENST00000449049 TRIAP1O43715 76 aa8.78□□□□□ -1
SHMT2-203ENST00000449049 S100A7L2Q5SY68 101 aa8.78□□□□□ -1
SHMT2-203ENST00000449049 IGLV1-50A0A075B6I6 118 aa8.78□□□□□ -1
SHMT2-203ENST00000449049 EPPK1P58107 5090 aaKnown RBP8.77□□□□□ -1.01
SHMT2-203ENST00000449049 RPL37AP8A6NKH3 93 aa8.77□□□□□ -1.01
SHMT2-203ENST00000449049 H3BT86 120 aa8.77□□□□□ -1.01
SHMT2-203ENST00000449049 RPS28P62857 69 aaKnown RBP8.77□□□□□ -1.01
SHMT2-203ENST00000449049 CDK2AP2O75956 126 aa8.75□□□□□ -1.01
SHMT2-203ENST00000449049 UBE2BP63146 152 aa8.75□□□□□ -1.01
SHMT2-203ENST00000449049 KRTAP11-1Q8IUC1 163 aa8.75□□□□□ -1.01
SHMT2-203ENST00000449049 FAM240AA0A1B0GVK7 77 aa8.75□□□□□ -1.01
SHMT2-203ENST00000449049 KCNQ1DNQ9H478 68 aa8.75□□□□□ -1.01
SHMT2-203ENST00000449049 COX6CP09669 75 aa8.74□□□□□ -1.01
SHMT2-203ENST00000449049 PRYO14603 147 aa8.74□□□□□ -1.01
SHMT2-203ENST00000449049 TRAV23DV6A0A075B6W5 121 aa8.73□□□□□ -1.01
SHMT2-203ENST00000449049 C9orf153Q5TBE3 101 aa8.73□□□□□ -1.01
SHMT2-203ENST00000449049 APOBP04114 4563 aaKnown RBP8.73□□□□□ -1.01
SHMT2-203ENST00000449049 TRBV7-7A0A0K0K1E9 115 aa8.72□□□□□ -1.01
SHMT2-203ENST00000449049 LST1O00453 97 aa8.72□□□□□ -1.01
SHMT2-203ENST00000449049 C3orf22Q8N5N4 141 aa8.71□□□□□ -1.01
SHMT2-203ENST00000449049 SMIM11BQ8TCY0 68 aa8.71□□□□□ -1.01
SHMT2-203ENST00000449049 SPRR1AP35321 89 aa8.71□□□□□ -1.02
SHMT2-203ENST00000449049 REG3GQ6UW15 175 aa8.71□□□□□ -1.02
SHMT2-203ENST00000449049 UQCRQO14949 82 aa8.69□□□□□ -1.02
SHMT2-203ENST00000449049 ZNF73O43830 326 aaPredicted RBP8.69□□□□□ -1.02
SHMT2-203ENST00000449049 RPL28P46779 137 aaKnown RBP8.69□□□□□ -1.02
SHMT2-203ENST00000449049 CLEC2BQ92478 149 aa8.69□□□□□ -1.02
SHMT2-203ENST00000449049 PSORS1C2Q9UIG4 136 aa8.69□□□□□ -1.02
SHMT2-203ENST00000449049 KRTAP4-16G5E9R7 235 aaPredicted RBP8.68□□□□□ -1.02
SHMT2-203ENST00000449049 C6orf99Q4VX62 202 aa8.68□□□□□ -1.02
SHMT2-203ENST00000449049 DIRC1Q969H9 104 aa8.68□□□□□ -1.02
SHMT2-203ENST00000449049 IMUPQ9GZP8 106 aa8.68□□□□□ -1.02
SHMT2-203ENST00000449049 ACYP1P07311 99 aa8.67□□□□□ -1.02
SHMT2-203ENST00000449049 LINC00528Q8N1L1 170 aa8.67□□□□□ -1.02
SHMT2-203ENST00000449049 BCE1O60756 84 aa8.66□□□□□ -1.02
SHMT2-203ENST00000449049 SMR3BP02814 79 aaPredicted RBP8.66□□□□□ -1.02
SHMT2-203ENST00000449049 TRBV7-6A0A0J9YX20 115 aa8.65□□□□□ -1.02
SHMT2-203ENST00000449049 C1orf137Q5JT78 98 aa8.65□□□□□ -1.02
SHMT2-203ENST00000449049 FAM236AA0A1B0GUQ0 79 aa8.65□□□□□ -1.03
SHMT2-203ENST00000449049 FAM236BA0A1B0GV22 79 aa8.65□□□□□ -1.03
SHMT2-203ENST00000449049 ETDCA0A1B0GVM5 59 aa8.64□□□□□ -1.03
SHMT2-203ENST00000449049 ELOF1P60002 83 aaKnown RBP8.63□□□□□ -1.03
SHMT2-203ENST00000449049 FAM19A1Q7Z5A9 133 aa8.63□□□□□ -1.03
SHMT2-203ENST00000449049 RYR1P21817 5038 aa8.63□□□□□ -1.03
SHMT2-203ENST00000449049 COX7BP24311 80 aa8.62□□□□□ -1.03
SHMT2-203ENST00000449049 RPL37AP61513 92 aaKnown RBP8.62□□□□□ -1.03
SHMT2-203ENST00000449049 Q6ZRX8 168 aa8.62□□□□□ -1.03
SHMT2-203ENST00000449049 KRTAP13-1Q8IUC0 172 aa8.62□□□□□ -1.03
SHMT2-203ENST00000449049 H0Y9J4 135 aa8.62□□□□□ -1.03
SHMT2-203ENST00000449049 GAGE2AQ6NT46 116 aa8.62□□□□□ -1.03
SHMT2-203ENST00000449049 IGLV7-43P04211 117 aa8.61□□□□□ -1.03
SHMT2-203ENST00000449049 CRYGAP11844 174 aa8.61□□□□□ -1.03
SHMT2-203ENST00000449049 PRLHP81277 87 aa8.61□□□□□ -1.03
SHMT2-203ENST00000449049 LINC00643Q86TS7 51 aa8.6□□□□□ -1.03
SHMT2-203ENST00000449049 UBE2AP49459 152 aa8.6□□□□□ -1.03
SHMT2-203ENST00000449049 KRTAP10-4P60372 401 aaPredicted RBP8.6□□□□□ -1.03
SHMT2-203ENST00000449049 H0YGX0 51 aa8.59□□□□□ -1.03
SHMT2-203ENST00000449049 COX7CP15954 63 aa8.59□□□□□ -1.03
SHMT2-203ENST00000449049 KIAA1109Q2LD37 5005 aa8.59□□□□□ -1.03
SHMT2-203ENST00000449049 SMCR5Q8TEV8 140 aa8.59□□□□□ -1.03
SHMT2-203ENST00000449049 Q9BRP9 147 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms