RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 KRTAP1-3Q8IUG1 177 aa5.65□□□□□ -1.51
PTPN3-204ENST00000446349 CENPFP49454 3210 aa5.65□□□□□ -1.51
PTPN3-204ENST00000446349 C15orf56Q8N910 161 aa5.65□□□□□ -1.51
PTPN3-204ENST00000446349 CD164Q04900 197 aa5.63□□□□□ -1.51
PTPN3-204ENST00000446349 FLNBO75369 2602 aaKnown RBP5.63□□□□□ -1.51
PTPN3-204ENST00000446349 PSORS1C2Q9UIG4 136 aa5.63□□□□□ -1.51
PTPN3-204ENST00000446349 IGLV5-37A0A075B6J1 123 aa5.62□□□□□ -1.51
PTPN3-204ENST00000446349 A0A1B0GVX0 72 aa5.62□□□□□ -1.51
PTPN3-204ENST00000446349 HELZ2Q9BYK8 2649 aaKnown RBP5.62□□□□□ -1.51
PTPN3-204ENST00000446349 KRTAP10-3P60369 221 aa5.61□□□□□ -1.51
PTPN3-204ENST00000446349 FAM218AQ96MZ4 157 aa5.61□□□□□ -1.51
PTPN3-204ENST00000446349 GIG44P09565 113 aaPredicted RBP5.61□□□□□ -1.51
PTPN3-204ENST00000446349 PRR15Q8IV56 129 aa5.61□□□□□ -1.51
PTPN3-204ENST00000446349 KRTAP1-1Q07627 177 aa5.6□□□□□ -1.51
PTPN3-204ENST00000446349 Q9UF83 564 aa5.6□□□□□ -1.51
PTPN3-204ENST00000446349 FAM168BA1KXE4 195 aa5.59□□□□□ -1.51
PTPN3-204ENST00000446349 LITAFQ99732 161 aa5.59□□□□□ -1.51
PTPN3-204ENST00000446349 C8orf17Q9NRJ1 99 aa5.59□□□□□ -1.51
PTPN3-204ENST00000446349 IGFL1Q6UW32 110 aa5.58□□□□□ -1.52
PTPN3-204ENST00000446349 FAM229BQ4G0N7 80 aa5.58□□□□□ -1.52
PTPN3-204ENST00000446349 SPRR4Q96PI1 79 aa5.58□□□□□ -1.52
PTPN3-204ENST00000446349 CYP4F30PQ9H0H9 118 aa5.58□□□□□ -1.52
PTPN3-204ENST00000446349 C9orf129Q5T035 196 aaKnown RBP5.57□□□□□ -1.52
PTPN3-204ENST00000446349 FLNAP21333 2647 aaKnown RBP5.56□□□□□ -1.52
PTPN3-204ENST00000446349 PRO0461Q9UI25 63 aa5.55□□□□□ -1.52
PTPN3-204ENST00000446349 UQCR11O14957 56 aa5.54□□□□□ -1.52
PTPN3-204ENST00000446349 ITPR3Q14573 2671 aa5.54□□□□□ -1.52
PTPN3-204ENST00000446349 Q8N377 158 aa5.54□□□□□ -1.52
PTPN3-204ENST00000446349 MGAM2Q2M2H8 2515 aa5.54□□□□□ -1.52
PTPN3-204ENST00000446349 C4orf26Q17RF5 130 aa5.54□□□□□ -1.52
PTPN3-204ENST00000446349 CASC10Q5T4H9 136 aa5.54□□□□□ -1.52
PTPN3-204ENST00000446349 K7EQZ3 153 aa5.53□□□□□ -1.52
PTPN3-204ENST00000446349 OBSCN-AS1Q96MR7 158 aa5.53□□□□□ -1.52
PTPN3-204ENST00000446349 SPINT4Q6UDR6 99 aa5.53□□□□□ -1.52
PTPN3-204ENST00000446349 BPTFQ12830 3046 aa5.53□□□□□ -1.52
PTPN3-204ENST00000446349 SMCPP49901 116 aaPredicted RBP5.52□□□□□ -1.53
PTPN3-204ENST00000446349 HECTD1Q9ULT8 2610 aa5.52□□□□□ -1.53
PTPN3-204ENST00000446349 A8MUN3 132 aa5.51□□□□□ -1.53
PTPN3-204ENST00000446349 DSCR10P59022 87 aa5.51□□□□□ -1.53
PTPN3-204ENST00000446349 CFAP46Q8IYW2 2715 aa5.51□□□□□ -1.53
PTPN3-204ENST00000446349 SMR3BP02814 79 aaPredicted RBP5.5□□□□□ -1.53
PTPN3-204ENST00000446349 LINC01600Q96MT4 127 aa5.5□□□□□ -1.53
PTPN3-204ENST00000446349 SPANXA2-OT1Q8N9U9 137 aa5.49□□□□□ -1.53
PTPN3-204ENST00000446349 A0A1W2PNN7 141 aa5.49□□□□□ -1.53
PTPN3-204ENST00000446349 Q6ZSA8 131 aa5.49□□□□□ -1.53
PTPN3-204ENST00000446349 COA5Q86WW8 74 aa5.48□□□□□ -1.53
PTPN3-204ENST00000446349 CRIPTQ9P021 101 aa5.48□□□□□ -1.53
PTPN3-204ENST00000446349 IGLV5-48A0A075B6I7 105 aa5.47□□□□□ -1.53
PTPN3-204ENST00000446349 C9orf92A6NGG3 77 aa5.47□□□□□ -1.53
PTPN3-204ENST00000446349 KMT2BQ9UMN6 2715 aaPredicted RBP5.47□□□□□ -1.53
PTPN3-204ENST00000446349 PRRC2CQ9Y520 2896 aaKnown RBP5.46□□□□□ -1.54
PTPN3-204ENST00000446349 IGLV7-46A0A075B6I9 117 aa5.46□□□□□ -1.54
PTPN3-204ENST00000446349 KLKP1Q107X0 134 aa5.46□□□□□ -1.54
PTPN3-204ENST00000446349 MAST4O15021 2626 aa5.46□□□□□ -1.54
PTPN3-204ENST00000446349 FAM104AQ969W3 186 aa5.46□□□□□ -1.54
PTPN3-204ENST00000446349 PLAC8Q9NZF1 115 aa5.46□□□□□ -1.54
PTPN3-204ENST00000446349 KTN1-AS1Q86SY8 53 aa5.45□□□□□ -1.54
PTPN3-204ENST00000446349 TNP2Q05952 138 aa5.45□□□□□ -1.54
PTPN3-204ENST00000446349 ATRQ13535 2644 aa5.45□□□□□ -1.54
PTPN3-204ENST00000446349 MIR22HGQ0VDD5 57 aa5.42□□□□□ -1.54
PTPN3-204ENST00000446349 SRCAPQ6ZRS2 3230 aa5.42□□□□□ -1.54
PTPN3-204ENST00000446349 SEC61BP60468 96 aaKnown RBP5.42□□□□□ -1.54
PTPN3-204ENST00000446349 HRES1P13985 223 aa5.41□□□□□ -1.54
PTPN3-204ENST00000446349 LCA10Q71F78 164 aa5.4□□□□□ -1.54
PTPN3-204ENST00000446349 LCE6AA0A183 80 aa5.39□□□□□ -1.55
PTPN3-204ENST00000446349 FLG2Q5D862 2391 aaPredicted RBP5.39□□□□□ -1.55
PTPN3-204ENST00000446349 IGLV8-61A0A075B6I0 122 aa5.39□□□□□ -1.55
PTPN3-204ENST00000446349 OXTP01178 125 aa5.37□□□□□ -1.55
PTPN3-204ENST00000446349 A0A1W2PNM2 257 aa5.37□□□□□ -1.55
PTPN3-204ENST00000446349 STAB1Q9NY15 2570 aa5.37□□□□□ -1.55
PTPN3-204ENST00000446349 KRTAP21-3Q3LHN1 58 aa5.36□□□□□ -1.55
PTPN3-204ENST00000446349 CDC42SE1Q9NRR8 79 aa5.36□□□□□ -1.55
PTPN3-204ENST00000446349 FP248Q71RG6 208 aaPredicted RBP5.35□□□□□ -1.55
PTPN3-204ENST00000446349 M0R2T5 61 aa5.35□□□□□ -1.55
PTPN3-204ENST00000446349 ANAPC11Q9NYG5 84 aa5.35□□□□□ -1.55
PTPN3-204ENST00000446349 SPRR1BP22528 89 aa5.33□□□□□ -1.56
PTPN3-204ENST00000446349 SPRR1AP35321 89 aa5.33□□□□□ -1.56
PTPN3-204ENST00000446349 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.33□□□□□ -1.56
PTPN3-204ENST00000446349 PRR26Q8N8Z3 221 aa5.33□□□□□ -1.56
PTPN3-204ENST00000446349 CSAG1Q6PB30 78 aa5.33□□□□□ -1.56
PTPN3-204ENST00000446349 LUZP6Q538Z0 58 aa5.32□□□□□ -1.56
PTPN3-204ENST00000446349 EIF4EBP3O60516 100 aaPredicted RBP5.31□□□□□ -1.56
PTPN3-204ENST00000446349 ZCCHC13Q8WW36 166 aaKnown RBP5.31□□□□□ -1.56
PTPN3-204ENST00000446349 LINC00483Q53H64 154 aa5.29□□□□□ -1.56
PTPN3-204ENST00000446349 Q5VSD8 79 aa5.28□□□□□ -1.56
PTPN3-204ENST00000446349 DNAH12Q6ZR08 3092 aa5.28□□□□□ -1.56
PTPN3-204ENST00000446349 H7BZZ5 65 aa5.27□□□□□ -1.57
PTPN3-204ENST00000446349 CAMK2N1Q7Z7J9 78 aa5.27□□□□□ -1.57
PTPN3-204ENST00000446349 S4R3F8 94 aa5.27□□□□□ -1.57
PTPN3-204ENST00000446349 TEX15Q9BXT5 2789 aa5.27□□□□□ -1.57
PTPN3-204ENST00000446349 BAHCC1Q9P281 2608 aa5.26□□□□□ -1.57
PTPN3-204ENST00000446349 LINC01554Q52M75 96 aa5.26□□□□□ -1.57
PTPN3-204ENST00000446349 Q8N1X5 172 aa5.26□□□□□ -1.57
PTPN3-204ENST00000446349 DMAC1Q96GE9 116 aa5.25□□□□□ -1.57
PTPN3-204ENST00000446349 OCR1Q9BZK8 76 aa5.25□□□□□ -1.57
PTPN3-204ENST00000446349 AKAP13Q12802 2813 aa5.25□□□□□ -1.57
PTPN3-204ENST00000446349 ZNF292O60281 2723 aa5.24□□□□□ -1.57
PTPN3-204ENST00000446349 H3BS24 57 aa5.23□□□□□ -1.57
PTPN3-204ENST00000446349 A0A1B0GU33 70 aa5.23□□□□□ -1.57
PTPN3-204ENST00000446349 CENPEQ02224 2701 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms