RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 S100A2P29034 98 aa12.74□□□□□ -0.37
TRAF4-205ENST00000444415 C3orf22Q8N5N4 141 aa12.74□□□□□ -0.37
TRAF4-205ENST00000444415 S100A7L2Q5SY68 101 aa12.73□□□□□ -0.37
TRAF4-205ENST00000444415 TRAV23DV6A0A075B6W5 121 aa12.72□□□□□ -0.37
TRAF4-205ENST00000444415 SNRPEP62304 92 aaKnown RBP12.72□□□□□ -0.37
TRAF4-205ENST00000444415 SPANXDQ9BXN6 97 aa12.72□□□□□ -0.37
TRAF4-205ENST00000444415 S100A6P06703 90 aa12.72□□□□□ -0.37
TRAF4-205ENST00000444415 Q6ZRX8 168 aa12.72□□□□□ -0.37
TRAF4-205ENST00000444415 TSPAN13O95857 204 aa12.71□□□□□ -0.38
TRAF4-205ENST00000444415 C5orf52A6NGY3 159 aa12.69□□□□□ -0.38
TRAF4-205ENST00000444415 AKR1D1P51857 326 aa12.69□□□□□ -0.38
TRAF4-205ENST00000444415 S100A12P80511 92 aa12.69□□□□□ -0.38
TRAF4-205ENST00000444415 SCGB1D4Q6XE38 83 aa12.69□□□□□ -0.38
TRAF4-205ENST00000444415 ZNF73O43830 326 aaPredicted RBP12.68□□□□□ -0.38
TRAF4-205ENST00000444415 LINC00483Q53H64 154 aa12.66□□□□□ -0.38
TRAF4-205ENST00000444415 ZNF706Q9Y5V0 76 aaPredicted RBP12.66□□□□□ -0.38
TRAF4-205ENST00000444415 LINC00304Q8N9R0 145 aa12.65□□□□□ -0.38
TRAF4-205ENST00000444415 PPDPFQ9H3Y8 114 aa12.65□□□□□ -0.38
TRAF4-205ENST00000444415 MUSTN1Q8IVN3 82 aa12.62□□□□□ -0.39
TRAF4-205ENST00000444415 OR13C6PQ8NH95 151 aa12.62□□□□□ -0.39
TRAF4-205ENST00000444415 IFITM1P13164 125 aa12.6□□□□□ -0.39
TRAF4-205ENST00000444415 GAGE2AQ6NT46 116 aa12.6□□□□□ -0.39
TRAF4-205ENST00000444415 Q6ZVH6 145 aa12.6□□□□□ -0.39
TRAF4-205ENST00000444415 PRR4Q16378 134 aa12.59□□□□□ -0.39
TRAF4-205ENST00000444415 LINC00518Q8N0U6 118 aa12.59□□□□□ -0.39
TRAF4-205ENST00000444415 ST20-AS1Q8NBB2 130 aa12.58□□□□□ -0.4
TRAF4-205ENST00000444415 JOSD1Q15040 202 aaPredicted RBP12.57□□□□□ -0.4
TRAF4-205ENST00000444415 SCGB1D1O95968 90 aa12.55□□□□□ -0.4
TRAF4-205ENST00000444415 C6orf99Q4VX62 202 aa12.55□□□□□ -0.4
TRAF4-205ENST00000444415 RETNLBQ9BQ08 111 aa12.55□□□□□ -0.4
TRAF4-205ENST00000444415 CBY1Q9Y3M2 126 aa12.55□□□□□ -0.4
TRAF4-205ENST00000444415 HSBP1L1C9JCN9 74 aa12.54□□□□□ -0.4
TRAF4-205ENST00000444415 Q8NBF4 154 aa12.54□□□□□ -0.4
TRAF4-205ENST00000444415 ELOF1P60002 83 aaKnown RBP12.53□□□□□ -0.4
TRAF4-205ENST00000444415 COPS9Q8WXC6 57 aa12.53□□□□□ -0.4
TRAF4-205ENST00000444415 IGLV9-49A0A0B4J1Y8 123 aa12.5□□□□□ -0.41
TRAF4-205ENST00000444415 HINT1P49773 126 aaPredicted RBP12.5□□□□□ -0.41
TRAF4-205ENST00000444415 CTAG1AP78358 180 aa12.5□□□□□ -0.41
TRAF4-205ENST00000444415 MOBPQ13875 183 aa12.5□□□□□ -0.41
TRAF4-205ENST00000444415 COX7BP24311 80 aa12.49□□□□□ -0.41
TRAF4-205ENST00000444415 A6NDN8 102 aa12.48□□□□□ -0.41
TRAF4-205ENST00000444415 MUC2Q02817 5179 aa12.47□□□□□ -0.41
TRAF4-205ENST00000444415 COX8AP10176 69 aa12.47□□□□□ -0.41
TRAF4-205ENST00000444415 SPAG11AQ6PDA7 123 aa12.47□□□□□ -0.41
TRAF4-205ENST00000444415 DHRS4-AS1Q9P1J3 65 aa12.47□□□□□ -0.41
TRAF4-205ENST00000444415 SPRR1BP22528 89 aa12.46□□□□□ -0.41
TRAF4-205ENST00000444415 TRBV7-6A0A0J9YX20 115 aa12.45□□□□□ -0.42
TRAF4-205ENST00000444415 A4D1N5 150 aa12.45□□□□□ -0.42
TRAF4-205ENST00000444415 MUC17Q685J3 4493 aa12.44□□□□□ -0.42
TRAF4-205ENST00000444415 SMIM11BQ8TCY0 68 aa12.44□□□□□ -0.42
TRAF4-205ENST00000444415 TRAV13-2A0A0B4J235 113 aa12.43□□□□□ -0.42
TRAF4-205ENST00000444415 SSBP3-AS1Q7Z2R9 100 aa12.43□□□□□ -0.42
TRAF4-205ENST00000444415 A0A1B0GWB2 263 aa12.41□□□□□ -0.42
TRAF4-205ENST00000444415 DLEU1O43261 78 aa12.41□□□□□ -0.42
TRAF4-205ENST00000444415 PAM16Q9Y3D7 125 aa12.41□□□□□ -0.42
TRAF4-205ENST00000444415 C14orf144Q96I85 54 aa12.4□□□□□ -0.42
TRAF4-205ENST00000444415 SPINK1P00995 79 aa12.4□□□□□ -0.43
TRAF4-205ENST00000444415 LINC01547P58512 204 aaPredicted RBP12.4□□□□□ -0.43
TRAF4-205ENST00000444415 SPATA45Q537H7 98 aa12.39□□□□□ -0.43
TRAF4-205ENST00000444415 C4orf48Q5BLP8 95 aa12.39□□□□□ -0.43
TRAF4-205ENST00000444415 C9orf153Q5TBE3 101 aa12.38□□□□□ -0.43
TRAF4-205ENST00000444415 C2orf91Q6ZV80 131 aa12.36□□□□□ -0.43
TRAF4-205ENST00000444415 C12orf57Q99622 126 aa12.36□□□□□ -0.43
TRAF4-205ENST00000444415 TMA7Q9Y2S6 64 aaKnown RBP12.36□□□□□ -0.43
TRAF4-205ENST00000444415 IGLV7-46A0A075B6I9 117 aa12.35□□□□□ -0.43
TRAF4-205ENST00000444415 HIST1H4GQ99525 98 aa12.35□□□□□ -0.43
TRAF4-205ENST00000444415 TPRXLQ17RH7 258 aa12.34□□□□□ -0.43
TRAF4-205ENST00000444415 SMIM29Q86T20 159 aa12.34□□□□□ -0.43
TRAF4-205ENST00000444415 Q8N377 158 aa12.34□□□□□ -0.43
TRAF4-205ENST00000444415 VAMP8Q9BV40 100 aa12.34□□□□□ -0.43
TRAF4-205ENST00000444415 IGLV5-48A0A075B6I7 105 aa12.34□□□□□ -0.43
TRAF4-205ENST00000444415 RPS29P62273 56 aaKnown RBP12.34□□□□□ -0.43
TRAF4-205ENST00000444415 DEFB105AQ8NG35 78 aa12.34□□□□□ -0.43
TRAF4-205ENST00000444415 PYY3Q5JQD4 70 aa12.33□□□□□ -0.44
TRAF4-205ENST00000444415 HIGD1BQ9P298 99 aa12.32□□□□□ -0.44
TRAF4-205ENST00000444415 TAL2Q16559 108 aa12.31□□□□□ -0.44
TRAF4-205ENST00000444415 Q1RN00 199 aa12.31□□□□□ -0.44
TRAF4-205ENST00000444415 TEX49A0A1B0GTD5 131 aa12.3□□□□□ -0.44
TRAF4-205ENST00000444415 SLC25A34Q6PIV7 304 aa12.29□□□□□ -0.44
TRAF4-205ENST00000444415 FP248Q71RG6 208 aaPredicted RBP12.29□□□□□ -0.44
TRAF4-205ENST00000444415 LAMTOR3Q9UHA4 124 aa12.29□□□□□ -0.44
TRAF4-205ENST00000444415 CFC1BP0CG36 223 aa12.27□□□□□ -0.44
TRAF4-205ENST00000444415 CFC1P0CG37 223 aa12.27□□□□□ -0.44
TRAF4-205ENST00000444415 LINC00575Q6W349 94 aa12.27□□□□□ -0.44
TRAF4-205ENST00000444415 KRTAP13-3Q3SY46 172 aa12.24□□□□□ -0.45
TRAF4-205ENST00000444415 NHP2Q9NX24 153 aaKnown RBP12.23□□□□□ -0.45
TRAF4-205ENST00000444415 HRCT1Q6UXD1 115 aa12.22□□□□□ -0.45
TRAF4-205ENST00000444415 A0A0G2JQZ4 141 aa12.21□□□□□ -0.45
TRAF4-205ENST00000444415 CDIP1Q9H305 208 aa12.21□□□□□ -0.45
TRAF4-205ENST00000444415 SLC25A20O43772 301 aa12.21□□□□□ -0.46
TRAF4-205ENST00000444415 VAMP3Q15836 100 aa12.21□□□□□ -0.46
TRAF4-205ENST00000444415 Q6ZQY7 126 aa12.2□□□□□ -0.46
TRAF4-205ENST00000444415 A0A0B4J2C4 111 aa12.19□□□□□ -0.46
TRAF4-205ENST00000444415 hADV29S1A0JD25 119 aa12.19□□□□□ -0.46
TRAF4-205ENST00000444415 CEND1Q8N111 149 aa12.19□□□□□ -0.46
TRAF4-205ENST00000444415 H7C2G1 150 aa12.17□□□□□ -0.46
TRAF4-205ENST00000444415 FXYD2P54710 66 aa12.17□□□□□ -0.46
TRAF4-205ENST00000444415 PRO1933Q9H354 126 aa12.17□□□□□ -0.46
TRAF4-205ENST00000444415 BVES-AS1Q5T3Y7 98 aa12.15□□□□□ -0.46
TRAF4-205ENST00000444415 CD164Q04900 197 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms