RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 LINC00337Q8N6G1 96 aa12.96□□□□□ -0.33
HDLBP-220ENST00000442730 KRTAP4-16G5E9R7 235 aaPredicted RBP12.95□□□□□ -0.34
HDLBP-220ENST00000442730 TSPAN13O95857 204 aa12.95□□□□□ -0.34
HDLBP-220ENST00000442730 DDTP30046 118 aa12.95□□□□□ -0.34
HDLBP-220ENST00000442730 RNF213Q63HN8 5207 aa12.94□□□□□ -0.34
HDLBP-220ENST00000442730 S100A12P80511 92 aa12.94□□□□□ -0.34
HDLBP-220ENST00000442730 S100A7L2Q5SY68 101 aa12.93□□□□□ -0.34
HDLBP-220ENST00000442730 SPRR4Q96PI1 79 aa12.92□□□□□ -0.34
HDLBP-220ENST00000442730 PRR4Q16378 134 aa12.91□□□□□ -0.34
HDLBP-220ENST00000442730 COPS9Q8WXC6 57 aa12.91□□□□□ -0.34
HDLBP-220ENST00000442730 ETDCA0A1B0GVM5 59 aa12.9□□□□□ -0.34
HDLBP-220ENST00000442730 IGLV6-57P01721 117 aa12.9□□□□□ -0.34
HDLBP-220ENST00000442730 Q6ZVH6 145 aa12.89□□□□□ -0.35
HDLBP-220ENST00000442730 LINC00304Q8N9R0 145 aa12.89□□□□□ -0.35
HDLBP-220ENST00000442730 IFITM1P13164 125 aa12.88□□□□□ -0.35
HDLBP-220ENST00000442730 JOSD1Q15040 202 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-220ENST00000442730 ZNF706Q9Y5V0 76 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-220ENST00000442730 TRAV23DV6A0A075B6W5 121 aa12.87□□□□□ -0.35
HDLBP-220ENST00000442730 C3orf22Q8N5N4 141 aa12.87□□□□□ -0.35
HDLBP-220ENST00000442730 SMCR5Q8TEV8 140 aa12.87□□□□□ -0.35
HDLBP-220ENST00000442730 VAMP8Q9BV40 100 aa12.86□□□□□ -0.35
HDLBP-220ENST00000442730 PPDPFQ9H3Y8 114 aa12.86□□□□□ -0.35
HDLBP-220ENST00000442730 PAM16Q9Y3D7 125 aa12.86□□□□□ -0.35
HDLBP-220ENST00000442730 B5MCH6 92 aa12.85□□□□□ -0.35
HDLBP-220ENST00000442730 COX8AP10176 69 aa12.85□□□□□ -0.35
HDLBP-220ENST00000442730 SPATA45Q537H7 98 aa12.84□□□□□ -0.35
HDLBP-220ENST00000442730 OR13C6PQ8NH95 151 aa12.84□□□□□ -0.35
HDLBP-220ENST00000442730 MUSTN1Q8IVN3 82 aa12.83□□□□□ -0.36
HDLBP-220ENST00000442730 CBY1Q9Y3M2 126 aa12.83□□□□□ -0.36
HDLBP-220ENST00000442730 LINC00518Q8N0U6 118 aa12.82□□□□□ -0.36
HDLBP-220ENST00000442730 Q6ZRX8 168 aa12.81□□□□□ -0.36
HDLBP-220ENST00000442730 ZNF73O43830 326 aaPredicted RBP12.8□□□□□ -0.36
HDLBP-220ENST00000442730 Q9BRP9 147 aa12.8□□□□□ -0.36
HDLBP-220ENST00000442730 ERC2-IT1O76042 136 aa12.79□□□□□ -0.36
HDLBP-220ENST00000442730 LINC00483Q53H64 154 aa12.79□□□□□ -0.36
HDLBP-220ENST00000442730 PYY3Q5JQD4 70 aa12.79□□□□□ -0.36
HDLBP-220ENST00000442730 DLEU1O43261 78 aa12.78□□□□□ -0.36
HDLBP-220ENST00000442730 C14orf144Q96I85 54 aa12.77□□□□□ -0.37
HDLBP-220ENST00000442730 RETNLBQ9BQ08 111 aa12.77□□□□□ -0.37
HDLBP-220ENST00000442730 CTAG1AP78358 180 aa12.76□□□□□ -0.37
HDLBP-220ENST00000442730 GAGE2AQ6NT46 116 aa12.74□□□□□ -0.37
HDLBP-220ENST00000442730 A6NDN8 102 aa12.73□□□□□ -0.37
HDLBP-220ENST00000442730 SLC25A34Q6PIV7 304 aa12.73□□□□□ -0.37
HDLBP-220ENST00000442730 HIST1H4GQ99525 98 aa12.73□□□□□ -0.37
HDLBP-220ENST00000442730 HINT1P49773 126 aaPredicted RBP12.72□□□□□ -0.37
HDLBP-220ENST00000442730 Q8NBF4 154 aa12.72□□□□□ -0.37
HDLBP-220ENST00000442730 SPAG11AQ6PDA7 123 aa12.71□□□□□ -0.37
HDLBP-220ENST00000442730 TRAV13-2A0A0B4J235 113 aa12.7□□□□□ -0.38
HDLBP-220ENST00000442730 A4D1N5 150 aa12.7□□□□□ -0.38
HDLBP-220ENST00000442730 C6orf99Q4VX62 202 aa12.69□□□□□ -0.38
HDLBP-220ENST00000442730 HIGD1BQ9P298 99 aa12.69□□□□□ -0.38
HDLBP-220ENST00000442730 C2orf91Q6ZV80 131 aa12.68□□□□□ -0.38
HDLBP-220ENST00000442730 ELOF1P60002 83 aaKnown RBP12.66□□□□□ -0.38
HDLBP-220ENST00000442730 IGLV9-49A0A0B4J1Y8 123 aa12.65□□□□□ -0.38
HDLBP-220ENST00000442730 COX7BP24311 80 aa12.65□□□□□ -0.38
HDLBP-220ENST00000442730 MOBPQ13875 183 aa12.65□□□□□ -0.38
HDLBP-220ENST00000442730 C4orf48Q5BLP8 95 aa12.65□□□□□ -0.38
HDLBP-220ENST00000442730 C12orf57Q99622 126 aa12.65□□□□□ -0.38
HDLBP-220ENST00000442730 IGLV7-46A0A075B6I9 117 aa12.63□□□□□ -0.39
HDLBP-220ENST00000442730 ST20-AS1Q8NBB2 130 aa12.63□□□□□ -0.39
HDLBP-220ENST00000442730 SMIM11BQ8TCY0 68 aa12.62□□□□□ -0.39
HDLBP-220ENST00000442730 DHRS4-AS1Q9P1J3 65 aa12.62□□□□□ -0.39
HDLBP-220ENST00000442730 TRBV7-6A0A0J9YX20 115 aa12.61□□□□□ -0.39
HDLBP-220ENST00000442730 TPRXLQ17RH7 258 aa12.61□□□□□ -0.39
HDLBP-220ENST00000442730 A0A1B0GWB2 263 aa12.6□□□□□ -0.39
HDLBP-220ENST00000442730 SPINK1P00995 79 aa12.6□□□□□ -0.39
HDLBP-220ENST00000442730 MUC2Q02817 5179 aa12.59□□□□□ -0.39
HDLBP-220ENST00000442730 SSBP3-AS1Q7Z2R9 100 aa12.59□□□□□ -0.39
HDLBP-220ENST00000442730 TAL2Q16559 108 aa12.58□□□□□ -0.4
HDLBP-220ENST00000442730 FP248Q71RG6 208 aaPredicted RBP12.56□□□□□ -0.4
HDLBP-220ENST00000442730 C9orf153Q5TBE3 101 aa12.55□□□□□ -0.4
HDLBP-220ENST00000442730 CEND1Q8N111 149 aa12.55□□□□□ -0.4
HDLBP-220ENST00000442730 SPRR1BP22528 89 aa12.54□□□□□ -0.4
HDLBP-220ENST00000442730 RPS29P62273 56 aaKnown RBP12.54□□□□□ -0.4
HDLBP-220ENST00000442730 UQCR10Q9UDW1 63 aa12.54□□□□□ -0.4
HDLBP-220ENST00000442730 RAB37Q96AX2 223 aa12.53□□□□□ -0.4
HDLBP-220ENST00000442730 CDIP1Q9H305 208 aa12.53□□□□□ -0.4
HDLBP-220ENST00000442730 A0A0B4J2C4 111 aa12.52□□□□□ -0.41
HDLBP-220ENST00000442730 TMEM238LA0A1B0GVL6 79 aa12.52□□□□□ -0.41
HDLBP-220ENST00000442730 A6NJY4 79 aa12.52□□□□□ -0.41
HDLBP-220ENST00000442730 CFC1BP0CG36 223 aa12.52□□□□□ -0.41
HDLBP-220ENST00000442730 CFC1P0CG37 223 aa12.52□□□□□ -0.41
HDLBP-220ENST00000442730 HSD52Q0P140 79 aa12.52□□□□□ -0.41
HDLBP-220ENST00000442730 SMIM6P0DI80 62 aa12.5□□□□□ -0.41
HDLBP-220ENST00000442730 FXYD2P54710 66 aa12.5□□□□□ -0.41
HDLBP-220ENST00000442730 VAMP3Q15836 100 aa12.5□□□□□ -0.41
HDLBP-220ENST00000442730 Q8N377 158 aa12.5□□□□□ -0.41
HDLBP-220ENST00000442730 NHP2Q9NX24 153 aaKnown RBP12.5□□□□□ -0.41
HDLBP-220ENST00000442730 MUC17Q685J3 4493 aa12.49□□□□□ -0.41
HDLBP-220ENST00000442730 H7C2G1 150 aa12.49□□□□□ -0.41
HDLBP-220ENST00000442730 SLC25A20O43772 301 aa12.45□□□□□ -0.42
HDLBP-220ENST00000442730 KRTAP13-3Q3SY46 172 aa12.45□□□□□ -0.42
HDLBP-220ENST00000442730 BVES-AS1Q5T3Y7 98 aa12.44□□□□□ -0.42
HDLBP-220ENST00000442730 DEFB105AQ8NG35 78 aa12.44□□□□□ -0.42
HDLBP-220ENST00000442730 Q1RN00 199 aa12.43□□□□□ -0.42
HDLBP-220ENST00000442730 LINC00575Q6W349 94 aa12.43□□□□□ -0.42
HDLBP-220ENST00000442730 LAMTOR3Q9UHA4 124 aa12.43□□□□□ -0.42
HDLBP-220ENST00000442730 PRO1933Q9H354 126 aa12.42□□□□□ -0.42
HDLBP-220ENST00000442730 IGLV5-48A0A075B6I7 105 aa12.41□□□□□ -0.42
HDLBP-220ENST00000442730 TEX49A0A1B0GTD5 131 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms