RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 NBASA2RRP1 2371 aa3.04□□□□□ -1.92
HMGB3P9-201ENST00000441799 ZNF469Q96JG9 3925 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P9-201ENST00000441799 ZNF407Q9C0G0 2248 aa3.04□□□□□ -1.92
HMGB3P9-201ENST00000441799 DOCK10Q96BY6 2186 aa3.04□□□□□ -1.92
HMGB3P9-201ENST00000441799 DIDO1Q9BTC0 2240 aaKnown RBP3.03□□□□□ -1.92
HMGB3P9-201ENST00000441799 TRAV21A0A0B4J279 112 aa3.03□□□□□ -1.92
HMGB3P9-201ENST00000441799 TRBV10-1A0A0K0K1A3 114 aa3.03□□□□□ -1.92
HMGB3P9-201ENST00000441799 LINC01547P58512 204 aaPredicted RBP3.03□□□□□ -1.92
HMGB3P9-201ENST00000441799 LYZP61626 148 aa3.03□□□□□ -1.92
HMGB3P9-201ENST00000441799 LINC00483Q53H64 154 aa3.03□□□□□ -1.92
HMGB3P9-201ENST00000441799 HCP5Q6MZN7 132 aa3.03□□□□□ -1.92
HMGB3P9-201ENST00000441799 LINC00322Q6ZN03 302 aaPredicted RBP3.03□□□□□ -1.92
HMGB3P9-201ENST00000441799 C15orf56Q8N910 161 aa3.03□□□□□ -1.92
HMGB3P9-201ENST00000441799 GAFA1Q96PS6 74 aa3.03□□□□□ -1.92
HMGB3P9-201ENST00000441799 LITAFQ99732 161 aa3.03□□□□□ -1.92
HMGB3P9-201ENST00000441799 CNFNQ9BYD5 112 aa3.03□□□□□ -1.92
HMGB3P9-201ENST00000441799 MRPL36Q9P0J6 103 aaKnown RBP3.03□□□□□ -1.92
HMGB3P9-201ENST00000441799 ICE1Q9Y2F5 2266 aa3.03□□□□□ -1.92
HMGB3P9-201ENST00000441799 USF3Q68DE3 2245 aa3.03□□□□□ -1.93
HMGB3P9-201ENST00000441799 DCHS2Q6V1P9 2916 aa3.03□□□□□ -1.93
HMGB3P9-201ENST00000441799 CACNA1DQ01668 2161 aa3.02□□□□□ -1.93
HMGB3P9-201ENST00000441799 PRRC2CQ9Y520 2896 aaKnown RBP3.02□□□□□ -1.93
HMGB3P9-201ENST00000441799 HIVEP3Q5T1R4 2406 aa3.02□□□□□ -1.93
HMGB3P9-201ENST00000441799 RYR3Q15413 4870 aa3.02□□□□□ -1.93
HMGB3P9-201ENST00000441799 IGHV1-3A0A0C4DH29 117 aa3.02□□□□□ -1.93
HMGB3P9-201ENST00000441799 H0YGX0 51 aa3.02□□□□□ -1.93
HMGB3P9-201ENST00000441799 PDE6GP18545 87 aa3.02□□□□□ -1.93
HMGB3P9-201ENST00000441799 LCE3CQ5T5A8 94 aa3.02□□□□□ -1.93
HMGB3P9-201ENST00000441799 WFDC9Q8NEX5 89 aa3.02□□□□□ -1.93
HMGB3P9-201ENST00000441799 LINC01006Q8NI28 216 aa3.02□□□□□ -1.93
HMGB3P9-201ENST00000441799 Q8TAT8 98 aa3.02□□□□□ -1.93
HMGB3P9-201ENST00000441799 TMEM167AQ8TBQ9 72 aa3.02□□□□□ -1.93
HMGB3P9-201ENST00000441799 CIRBP-AS1Q8TBR5 109 aa3.02□□□□□ -1.93
HMGB3P9-201ENST00000441799 ZNF625Q96I27 306 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P9-201ENST00000441799 LINC00208Q96KT6 92 aa3.02□□□□□ -1.93
HMGB3P9-201ENST00000441799 MAP1AP78559 2803 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P9-201ENST00000441799 IGLV4-69A0A075B6H9 119 aa3.01□□□□□ -1.93
HMGB3P9-201ENST00000441799 A0A1B0GVY2 172 aa3.01□□□□□ -1.93
HMGB3P9-201ENST00000441799 H3BPC8 53 aa3.01□□□□□ -1.93
HMGB3P9-201ENST00000441799 KRTAP10-3P60369 221 aa3.01□□□□□ -1.93
HMGB3P9-201ENST00000441799 SPAG11BQ08648 103 aa3.01□□□□□ -1.93
HMGB3P9-201ENST00000441799 PDE6HQ13956 83 aa3.01□□□□□ -1.93
HMGB3P9-201ENST00000441799 DEFB114Q30KQ6 69 aa3.01□□□□□ -1.93
HMGB3P9-201ENST00000441799 SPAG11AQ6PDA7 123 aa3.01□□□□□ -1.93
HMGB3P9-201ENST00000441799 KRTAP26-1Q6PEX3 210 aa3.01□□□□□ -1.93
HMGB3P9-201ENST00000441799 NTM-AS1Q6ZSK4 140 aa3.01□□□□□ -1.93
HMGB3P9-201ENST00000441799 SMIM29Q86T20 159 aa3.01□□□□□ -1.93
HMGB3P9-201ENST00000441799 COX7B2Q8TF08 81 aa3.01□□□□□ -1.93
HMGB3P9-201ENST00000441799 LINC00167Q96N53 147 aa3.01□□□□□ -1.93
HMGB3P9-201ENST00000441799 HIGD2AQ9BW72 106 aa3.01□□□□□ -1.93
HMGB3P9-201ENST00000441799 PRR34Q9NV39 138 aa3.01□□□□□ -1.93
HMGB3P9-201ENST00000441799 CCDC168Q8NDH2 2452 aa3.01□□□□□ -1.93
HMGB3P9-201ENST00000441799 COL6A5A8TX70 2615 aa3□□□□□ -1.93
HMGB3P9-201ENST00000441799 IGKV1D-37A0A075B6S9 117 aa3□□□□□ -1.93
HMGB3P9-201ENST00000441799 LOC110117498A0A087WWA1 95 aa3□□□□□ -1.93
HMGB3P9-201ENST00000441799 A0A1W2PNU3 283 aaPredicted RBP3□□□□□ -1.93
HMGB3P9-201ENST00000441799 SMIM1B2RUZ4 78 aa3□□□□□ -1.93
HMGB3P9-201ENST00000441799 IGKV1-17P01599 117 aa3□□□□□ -1.93
HMGB3P9-201ENST00000441799 TLX1NBP0CAT3 122 aa3□□□□□ -1.93
HMGB3P9-201ENST00000441799 CCL3L1P16619 93 aa3□□□□□ -1.93
HMGB3P9-201ENST00000441799 HIGD2BQ4VC39 106 aa3□□□□□ -1.93
HMGB3P9-201ENST00000441799 C1orf137Q5JT78 98 aa3□□□□□ -1.93
HMGB3P9-201ENST00000441799 LYPD1Q8N2G4 141 aa3□□□□□ -1.93
HMGB3P9-201ENST00000441799 KNTC1P50748 2209 aa3□□□□□ -1.93
HMGB3P9-201ENST00000441799 IGLV11-55A0A075B6I3 123 aa2.99□□□□□ -1.93
HMGB3P9-201ENST00000441799 IGKV1OR2-108A0A075B7D4 117 aa2.99□□□□□ -1.93
HMGB3P9-201ENST00000441799 A8MUU9 505 aa2.99□□□□□ -1.93
HMGB3P9-201ENST00000441799 ODF3BA8MYP8 253 aa2.99□□□□□ -1.93
HMGB3P9-201ENST00000441799 WT1-ASQ06250 92 aa2.99□□□□□ -1.93
HMGB3P9-201ENST00000441799 DEFB113Q30KQ7 82 aa2.99□□□□□ -1.93
HMGB3P9-201ENST00000441799 C10orf55Q5SWW7 151 aa2.99□□□□□ -1.93
HMGB3P9-201ENST00000441799 RNF5Q99942 180 aa2.99□□□□□ -1.93
HMGB3P9-201ENST00000441799 KLK9Q9UKQ9 250 aa2.99□□□□□ -1.93
HMGB3P9-201ENST00000441799 CUBNO60494 3623 aa2.99□□□□□ -1.93
HMGB3P9-201ENST00000441799 MEGF8Q7Z7M0 2845 aa2.99□□□□□ -1.93
HMGB3P9-201ENST00000441799 PKD1L1Q8TDX9 2849 aa2.98□□□□□ -1.93
HMGB3P9-201ENST00000441799 RP1L1Q8IWN7 2480 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P9-201ENST00000441799 APELAP0DMC3 54 aa2.98□□□□□ -1.93
HMGB3P9-201ENST00000441799 KRTAP25-1Q3LHN0 102 aa2.98□□□□□ -1.93
HMGB3P9-201ENST00000441799 MIR7-3HGQ8N6C7 128 aa2.98□□□□□ -1.93
HMGB3P9-201ENST00000441799 ZNRD1Q9P1U0 126 aa2.98□□□□□ -1.93
HMGB3P9-201ENST00000441799 KMT2CQ8NEZ4 4911 aaKnown RBP2.98□□□□□ -1.93
HMGB3P9-201ENST00000441799 FN1P02751 2386 aaKnown RBP2.97□□□□□ -1.93
HMGB3P9-201ENST00000441799 ARHGAP32A7KAX9 2087 aa2.97□□□□□ -1.93
HMGB3P9-201ENST00000441799 TET2Q6N021 2002 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P9-201ENST00000441799 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P9-201ENST00000441799 H3BRN7 92 aa2.97□□□□□ -1.93
HMGB3P9-201ENST00000441799 PANO1I0J062 215 aa2.97□□□□□ -1.93
HMGB3P9-201ENST00000441799 DMAC1Q96GE9 116 aa2.97□□□□□ -1.93
HMGB3P9-201ENST00000441799 SMIM2Q9BVW6 85 aa2.97□□□□□ -1.93
HMGB3P9-201ENST00000441799 KAAG1Q9UBP8 84 aa2.97□□□□□ -1.93
HMGB3P9-201ENST00000441799 MXRA5Q9NR99 2828 aa2.97□□□□□ -1.93
HMGB3P9-201ENST00000441799 PRAC2D3DTV9 90 aa2.96□□□□□ -1.94
HMGB3P9-201ENST00000441799 H3BQ85 93 aa2.96□□□□□ -1.94
HMGB3P9-201ENST00000441799 SPINK7P58062 85 aa2.96□□□□□ -1.94
HMGB3P9-201ENST00000441799 C9orf129Q5T035 196 aaKnown RBP2.96□□□□□ -1.94
HMGB3P9-201ENST00000441799 KRTAP5-2Q701N4 177 aa2.96□□□□□ -1.94
HMGB3P9-201ENST00000441799 KRTAP4-3Q9BYR4 195 aa2.96□□□□□ -1.94
HMGB3P9-201ENST00000441799 JMJD1CQ15652 2540 aa2.96□□□□□ -1.94
HMGB3P9-201ENST00000441799 PRRC2AP48634 2157 aaKnown RBP2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms