RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 LINC00304Q8N9R0 145 aa11.66□□□□□ -0.54
SHROOM1-204ENST00000440118 E9PLD3 99 aa11.65□□□□□ -0.54
SHROOM1-204ENST00000440118 TSPEAR-AS2P59090 65 aa11.65□□□□□ -0.54
SHROOM1-204ENST00000440118 J3QQQ9 107 aa11.64□□□□□ -0.55
SHROOM1-204ENST00000440118 ETDCA0A1B0GVM5 59 aa11.63□□□□□ -0.55
SHROOM1-204ENST00000440118 TAL2Q16559 108 aa11.63□□□□□ -0.55
SHROOM1-204ENST00000440118 DAND5Q8N907 189 aa11.63□□□□□ -0.55
SHROOM1-204ENST00000440118 SNHG12Q9BXW3 62 aa11.63□□□□□ -0.55
SHROOM1-204ENST00000440118 ZNF706Q9Y5V0 76 aaPredicted RBP11.63□□□□□ -0.55
SHROOM1-204ENST00000440118 HSD52Q0P140 79 aa11.62□□□□□ -0.55
SHROOM1-204ENST00000440118 A6NDN8 102 aa11.61□□□□□ -0.55
SHROOM1-204ENST00000440118 TRBV10-3A0A0K0K1G6 114 aa11.6□□□□□ -0.55
SHROOM1-204ENST00000440118 BATFQ16520 125 aa11.59□□□□□ -0.55
SHROOM1-204ENST00000440118 LINC00337Q8N6G1 96 aa11.59□□□□□ -0.55
SHROOM1-204ENST00000440118 KCNQ1DNQ9H478 68 aa11.59□□□□□ -0.55
SHROOM1-204ENST00000440118 SPRR4Q96PI1 79 aa11.58□□□□□ -0.56
SHROOM1-204ENST00000440118 HINT1P49773 126 aaPredicted RBP11.56□□□□□ -0.56
SHROOM1-204ENST00000440118 C3orf22Q8N5N4 141 aa11.56□□□□□ -0.56
SHROOM1-204ENST00000440118 RETNLBQ9BQ08 111 aa11.56□□□□□ -0.56
SHROOM1-204ENST00000440118 SPANXB1Q9NS25 103 aaPredicted RBP11.56□□□□□ -0.56
SHROOM1-204ENST00000440118 S100A7L2Q5SY68 101 aa11.55□□□□□ -0.56
SHROOM1-204ENST00000440118 SCGB1D4Q6XE38 83 aa11.55□□□□□ -0.56
SHROOM1-204ENST00000440118 PCP2Q8IVA1 136 aa11.55□□□□□ -0.56
SHROOM1-204ENST00000440118 SPRR1AP35321 89 aa11.54□□□□□ -0.56
SHROOM1-204ENST00000440118 TRBV10-2A0A0K0K1G8 114 aa11.53□□□□□ -0.56
SHROOM1-204ENST00000440118 TMEM238LA0A1B0GVL6 79 aa11.53□□□□□ -0.56
SHROOM1-204ENST00000440118 A6NJY4 79 aa11.53□□□□□ -0.56
SHROOM1-204ENST00000440118 ZNF815PA8K554 130 aa11.53□□□□□ -0.56
SHROOM1-204ENST00000440118 NPC2P61916 151 aa11.53□□□□□ -0.56
SHROOM1-204ENST00000440118 BVES-AS1Q5T3Y7 98 aa11.53□□□□□ -0.56
SHROOM1-204ENST00000440118 C2orf91Q6ZV80 131 aa11.53□□□□□ -0.56
SHROOM1-204ENST00000440118 SMCR5Q8TEV8 140 aa11.53□□□□□ -0.56
SHROOM1-204ENST00000440118 PPDPFQ9H3Y8 114 aa11.52□□□□□ -0.57
SHROOM1-204ENST00000440118 LOC107984156A0A0G2JMH3 177 aa11.51□□□□□ -0.57
SHROOM1-204ENST00000440118 C4orf48Q5BLP8 95 aa11.51□□□□□ -0.57
SHROOM1-204ENST00000440118 ARL17AQ8IVW1 177 aa11.51□□□□□ -0.57
SHROOM1-204ENST00000440118 HIST1H4GQ99525 98 aa11.51□□□□□ -0.57
SHROOM1-204ENST00000440118 A0A0J9YXY3 114 aa11.5□□□□□ -0.57
SHROOM1-204ENST00000440118 KRTAP4-16G5E9R7 235 aaPredicted RBP11.49□□□□□ -0.57
SHROOM1-204ENST00000440118 NDUFC2O95298 119 aa11.49□□□□□ -0.57
SHROOM1-204ENST00000440118 COPS9Q8WXC6 57 aa11.49□□□□□ -0.57
SHROOM1-204ENST00000440118 GAGE2AQ6NT46 116 aa11.48□□□□□ -0.57
SHROOM1-204ENST00000440118 SPAG11AQ6PDA7 123 aa11.48□□□□□ -0.57
SHROOM1-204ENST00000440118 Q6ZVH6 145 aa11.48□□□□□ -0.57
SHROOM1-204ENST00000440118 TRAV23DV6A0A075B6W5 121 aa11.47□□□□□ -0.57
SHROOM1-204ENST00000440118 B5MCH6 92 aa11.47□□□□□ -0.57
SHROOM1-204ENST00000440118 CEND1Q8N111 149 aa11.47□□□□□ -0.57
SHROOM1-204ENST00000440118 Q8NBF4 154 aa11.46□□□□□ -0.57
SHROOM1-204ENST00000440118 Q6ZRX8 168 aa11.45□□□□□ -0.58
SHROOM1-204ENST00000440118 IGLV7-46A0A075B6I9 117 aa11.44□□□□□ -0.58
SHROOM1-204ENST00000440118 IGLV6-57P01721 117 aa11.44□□□□□ -0.58
SHROOM1-204ENST00000440118 ADAMTSL4-AS1Q5T5F5 129 aa11.44□□□□□ -0.58
SHROOM1-204ENST00000440118 CBY1Q9Y3M2 126 aa11.44□□□□□ -0.58
SHROOM1-204ENST00000440118 SOSTDC1Q6X4U4 206 aa11.43□□□□□ -0.58
SHROOM1-204ENST00000440118 CDIP1Q9H305 208 aa11.43□□□□□ -0.58
SHROOM1-204ENST00000440118 IGLV9-49A0A0B4J1Y8 123 aa11.42□□□□□ -0.58
SHROOM1-204ENST00000440118 A0A1B0GV90 55 aa11.42□□□□□ -0.58
SHROOM1-204ENST00000440118 ZNF73O43830 326 aaPredicted RBP11.41□□□□□ -0.58
SHROOM1-204ENST00000440118 TIMM17BO60830 172 aa11.41□□□□□ -0.58
SHROOM1-204ENST00000440118 ERC2-IT1O76042 136 aa11.41□□□□□ -0.58
SHROOM1-204ENST00000440118 LINC00483Q53H64 154 aa11.41□□□□□ -0.58
SHROOM1-204ENST00000440118 Q9BRP9 147 aa11.41□□□□□ -0.58
SHROOM1-204ENST00000440118 MOBPQ13875 183 aa11.4□□□□□ -0.58
SHROOM1-204ENST00000440118 OR13C6PQ8NH95 151 aa11.4□□□□□ -0.58
SHROOM1-204ENST00000440118 SPANXCQ9NY87 97 aa11.4□□□□□ -0.58
SHROOM1-204ENST00000440118 EIF4EBP3O60516 100 aaPredicted RBP11.39□□□□□ -0.59
SHROOM1-204ENST00000440118 LINC00308Q8TCZ7 52 aa11.39□□□□□ -0.59
SHROOM1-204ENST00000440118 TTTY13Q9BZ97 58 aa11.39□□□□□ -0.59
SHROOM1-204ENST00000440118 IFITM1P13164 125 aa11.38□□□□□ -0.59
SHROOM1-204ENST00000440118 TPRXLQ17RH7 258 aa11.38□□□□□ -0.59
SHROOM1-204ENST00000440118 A0A0U1RQV1 116 aa11.37□□□□□ -0.59
SHROOM1-204ENST00000440118 C9orf118A6NHY6 69 aa11.36□□□□□ -0.59
SHROOM1-204ENST00000440118 C9orf153Q5TBE3 101 aa11.36□□□□□ -0.59
SHROOM1-204ENST00000440118 TAX1BP3O14907 124 aa11.35□□□□□ -0.59
SHROOM1-204ENST00000440118 SPINK1P00995 79 aa11.35□□□□□ -0.59
SHROOM1-204ENST00000440118 VAMP3Q15836 100 aa11.35□□□□□ -0.59
SHROOM1-204ENST00000440118 LYRM7Q5U5X0 104 aa11.35□□□□□ -0.59
SHROOM1-204ENST00000440118 GTF2H5Q6ZYL4 71 aa11.35□□□□□ -0.59
SHROOM1-204ENST00000440118 LITAFQ99732 161 aa11.35□□□□□ -0.59
SHROOM1-204ENST00000440118 FP248Q71RG6 208 aaPredicted RBP11.34□□□□□ -0.59
SHROOM1-204ENST00000440118 SPANXDQ9BXN6 97 aa11.34□□□□□ -0.59
SHROOM1-204ENST00000440118 NHP2Q9NX24 153 aaKnown RBP11.33□□□□□ -0.6
SHROOM1-204ENST00000440118 A0A1B0GWB2 263 aa11.32□□□□□ -0.6
SHROOM1-204ENST00000440118 FABP2P12104 132 aa11.31□□□□□ -0.6
SHROOM1-204ENST00000440118 FXYD2P54710 66 aa11.31□□□□□ -0.6
SHROOM1-204ENST00000440118 SSBP3-AS1Q7Z2R9 100 aa11.31□□□□□ -0.6
SHROOM1-204ENST00000440118 UBE2V1Q13404 147 aa11.29□□□□□ -0.6
SHROOM1-204ENST00000440118 ST20-AS1Q8NBB2 130 aa11.29□□□□□ -0.6
SHROOM1-204ENST00000440118 RAB37Q96AX2 223 aa11.28□□□□□ -0.6
SHROOM1-204ENST00000440118 MUC2Q02817 5179 aa11.28□□□□□ -0.6
SHROOM1-204ENST00000440118 DHRS4-AS1Q9P1J3 65 aa11.27□□□□□ -0.61
SHROOM1-204ENST00000440118 A0A0B4J2C4 111 aa11.26□□□□□ -0.61
SHROOM1-204ENST00000440118 PRO1854Q9UHT4 67 aa11.26□□□□□ -0.61
SHROOM1-204ENST00000440118 A0A1W2PPM0 123 aa11.25□□□□□ -0.61
SHROOM1-204ENST00000440118 H3BUT2 72 aa11.25□□□□□ -0.61
SHROOM1-204ENST00000440118 COX7BP24311 80 aa11.25□□□□□ -0.61
SHROOM1-204ENST00000440118 RPS29P62273 56 aaKnown RBP11.25□□□□□ -0.61
SHROOM1-204ENST00000440118 MUSTN1Q8IVN3 82 aa11.25□□□□□ -0.61
SHROOM1-204ENST00000440118 C6orf99Q4VX62 202 aa11.24□□□□□ -0.61
SHROOM1-204ENST00000440118 SLC25A20O43772 301 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 977.8 ms